Wall clock time and date at job start Mon Mar 30 2020 01:07:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.36932 * 120.00388 * 2 1 4 4 H 1.08001 * 120.00059 * 201.43751 * 3 2 1 5 5 C 1.38819 * 120.00013 * 21.43103 * 3 2 1 6 6 N 1.31624 * 119.99678 * 15.12159 * 5 3 2 7 7 Si 1.86794 * 120.00195 * 195.11718 * 5 3 2 8 8 H 1.48501 * 109.47103 * 0.02562 * 7 5 3 9 9 H 1.48496 * 109.47065 * 120.00169 * 7 5 3 10 10 H 1.48503 * 109.47128 * 240.00322 * 7 5 3 11 11 C 1.46505 * 119.99892 * 180.02562 * 2 1 3 12 12 C 1.50696 * 109.46870 * 270.31281 * 11 2 1 13 13 C 1.38235 * 119.99896 * 0.28647 * 12 11 2 14 14 C 1.38324 * 119.98976 * 179.97438 * 13 12 11 15 15 Cl 1.73608 * 120.01435 * 179.97438 * 14 13 12 16 16 C 1.38372 * 119.97775 * 359.97438 * 14 13 12 17 17 C 1.38203 * 119.98162 * 359.97438 * 16 14 13 18 18 C 1.38220 * 119.99247 * 180.02562 * 12 11 2 19 19 N 1.48028 * 119.98764 * 359.97438 * 18 12 11 20 20 O 1.21793 * 120.00132 * 182.75265 * 19 18 12 21 21 O 1.21798 * 119.99332 * 2.75209 * 19 18 12 22 22 H 1.09004 * 109.47456 * 275.11161 * 1 2 3 23 23 H 1.09006 * 109.47144 * 35.10661 * 1 2 3 24 24 H 1.09004 * 109.47851 * 155.10893 * 1 2 3 25 25 H 0.96996 * 119.99715 * 179.97438 * 6 5 3 26 26 H 1.08998 * 109.46925 * 30.30770 * 11 2 1 27 27 H 1.08995 * 109.47407 * 150.31215 * 11 2 1 28 28 H 1.07998 * 120.00078 * 359.95704 * 13 12 11 29 29 H 1.07994 * 120.01462 * 180.02562 * 16 14 13 30 30 H 1.07997 * 119.98782 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1497 1.1858 0.0000 4 1 3.1736 1.2181 -0.3418 5 6 1.5277 2.3465 0.4393 6 7 0.4068 2.2732 1.1253 7 14 2.2814 4.0123 0.0568 8 1 3.5314 3.8229 -0.7222 9 1 1.3211 4.8194 -0.7378 10 1 2.5907 4.7188 1.3259 11 6 2.1974 -1.2688 -0.0006 12 6 2.4418 -1.7083 1.4200 13 6 1.9825 -0.9366 2.4709 14 6 2.2065 -1.3405 3.7748 15 17 1.6305 -0.3715 5.0952 16 6 2.8898 -2.5171 4.0265 17 6 3.3476 -3.2883 2.9750 18 6 3.1206 -2.8857 1.6719 19 7 3.6067 -3.7149 0.5462 20 8 4.1604 -4.7770 0.7668 21 8 3.4528 -3.3349 -0.6008 22 1 -0.3634 0.0916 1.0236 23 1 -0.3634 0.8408 -0.5910 24 1 -0.3635 -0.9322 -0.4325 25 1 -0.0277 3.0842 1.4326 26 1 1.6107 -2.0268 -0.5195 27 1 3.1522 -1.1369 -0.5095 28 1 1.4492 -0.0184 2.2739 29 1 3.0647 -2.8331 5.0442 30 1 3.8813 -4.2064 3.1713 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000093097759.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:07 Heat of formation + Delta-G solvation = 42.508228 kcal Electronic energy + Delta-G solvation = -18630.796797 eV Core-core repulsion = 15456.408904 eV Total energy + Delta-G solvation = -3174.387893 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.92492 -39.32637 -36.63220 -36.33926 -35.66052 -32.32809 -31.40339 -30.41200 -26.95711 -26.01952 -25.49336 -22.77705 -21.96575 -20.74969 -18.73877 -18.32942 -17.29451 -16.88654 -16.51754 -15.54062 -14.82642 -14.31385 -13.93957 -13.70384 -13.45091 -13.17486 -12.70205 -11.99647 -11.72493 -11.57652 -11.37884 -11.20356 -11.01427 -10.95820 -10.82106 -10.74952 -10.63265 -10.44781 -10.12431 -9.99922 -9.02230 -8.80824 -8.70660 -7.05626 -5.92427 -3.39296 0.09129 1.19231 1.59155 1.69194 2.13244 3.29261 3.38303 3.39973 3.46272 4.34391 4.60142 4.63386 4.99586 5.06953 5.26763 5.39337 5.51472 5.74713 5.86779 6.09735 6.15165 6.23875 6.52512 6.60301 6.76820 6.91237 7.20050 7.52295 7.67852 7.97458 8.18265 9.03676 9.63873 10.11872 11.11942 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.015679 B = 0.008078 C = 0.005942 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1785.389793 B = 3465.385370 C = 4711.170909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.154 3.846 2 N -0.597 5.597 3 C -0.264 4.264 4 H 0.072 0.928 5 C 0.008 3.992 6 N -0.903 5.903 7 Si 0.904 3.096 8 H -0.277 1.277 9 H -0.288 1.288 10 H -0.290 1.290 11 C 0.176 3.824 12 C -0.013 4.013 13 C -0.081 4.081 14 C 0.006 3.994 15 Cl -0.051 7.051 16 C -0.132 4.132 17 C -0.057 4.057 18 C -0.059 4.059 19 N 0.037 4.963 20 O -0.187 6.187 21 O -0.154 6.154 22 H 0.033 0.967 23 H 0.048 0.952 24 H 0.002 0.998 25 H 0.256 0.744 26 H 0.077 0.923 27 H 0.087 0.913 28 H 0.193 0.807 29 H 0.146 0.854 30 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.379 -8.185 5.990 10.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 N -0.318 5.318 3 C -0.393 4.393 4 H 0.090 0.910 5 C -0.191 4.191 6 N -0.547 5.547 7 Si 0.734 3.266 8 H -0.202 1.202 9 H -0.214 1.214 10 H -0.217 1.217 11 C 0.047 3.953 12 C -0.018 4.018 13 C -0.100 4.100 14 C -0.022 4.022 15 Cl -0.022 7.022 16 C -0.151 4.151 17 C -0.076 4.076 18 C -0.143 4.143 19 N 0.553 4.447 20 O -0.397 6.397 21 O -0.371 6.371 22 H 0.051 0.949 23 H 0.067 0.933 24 H 0.021 0.979 25 H 0.066 0.934 26 H 0.095 0.905 27 H 0.105 0.895 28 H 0.210 0.790 29 H 0.164 0.836 30 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.977 -7.568 6.690 10.293 hybrid contribution 0.461 0.797 -0.062 0.923 sum 2.438 -6.771 6.628 9.784 Atomic orbital electron populations 1.20940 0.82042 0.96243 0.99774 1.44138 1.02168 1.00487 1.85013 1.19273 0.97788 0.84864 1.37421 0.91032 1.24968 0.97716 0.98496 0.97898 1.70029 1.19381 1.27438 1.37839 0.86194 0.78663 0.84032 0.77740 1.20199 1.21415 1.21650 1.20437 0.98323 0.89032 0.87496 1.21741 0.88918 0.88564 1.02580 1.21822 0.98295 1.02053 0.87816 1.21471 0.97388 0.92925 0.90382 1.98394 1.87070 1.70422 1.46302 1.20903 1.00522 0.94014 0.99678 1.20761 0.97487 1.00139 0.89223 1.21121 1.10299 0.96474 0.86431 1.43586 0.98290 1.00536 1.02336 1.94475 1.43247 1.10760 1.91190 1.94540 1.60366 1.75523 1.06656 0.94880 0.93298 0.97931 0.93396 0.90480 0.89518 0.79022 0.83593 0.83059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.15 3.49 8.70 59.84 0.52 4.01 16 2 N -0.60 -13.74 1.73 -182.50 -0.32 -14.06 16 3 C -0.26 -6.68 9.05 -15.06 -0.14 -6.82 16 4 H 0.07 1.82 7.86 -52.49 -0.41 1.41 16 5 C 0.01 0.21 5.06 -17.43 -0.09 0.13 16 6 N -0.90 -23.75 10.74 55.49 0.60 -23.16 16 7 Si 0.90 20.73 29.58 -169.99 -5.03 15.70 16 8 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 9 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 10 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 11 C 0.18 3.50 4.34 -5.19 -0.02 3.48 16 12 C -0.01 -0.23 5.88 -104.63 -0.62 -0.85 16 13 C -0.08 -1.53 8.94 -39.55 -0.35 -1.89 16 14 C 0.01 0.09 6.32 -39.50 -0.25 -0.16 16 15 Cl -0.05 -0.77 28.96 -51.86 -1.50 -2.27 16 16 C -0.13 -1.73 9.83 -39.54 -0.39 -2.11 16 17 C -0.06 -0.78 9.55 -39.59 -0.38 -1.16 16 18 C -0.06 -0.98 6.84 -79.94 -0.55 -1.53 16 19 N 0.04 0.65 4.45 33.97 0.15 0.80 16 20 O -0.19 -3.20 18.45 -29.46 -0.54 -3.75 16 21 O -0.15 -2.82 15.43 -29.46 -0.45 -3.27 16 22 H 0.03 0.79 6.83 -51.93 -0.35 0.43 16 23 H 0.05 1.19 7.29 -51.93 -0.38 0.81 16 24 H 0.00 0.04 7.84 -51.93 -0.41 -0.36 16 25 H 0.26 6.62 8.31 -40.82 -0.34 6.28 16 26 H 0.08 1.47 7.10 -51.93 -0.37 1.10 16 27 H 0.09 1.76 7.12 -51.93 -0.37 1.39 16 28 H 0.19 4.32 5.80 -52.49 -0.30 4.02 16 29 H 0.15 1.44 8.06 -52.49 -0.42 1.02 16 30 H 0.15 1.71 7.61 -52.49 -0.40 1.31 16 LS Contribution 279.02 15.07 4.20 4.20 Total: -1.00 -26.09 279.02 -7.70 -33.79 By element: Atomic # 1 Polarization: 1.46 SS G_CDS: -2.55 Total: -1.09 kcal Atomic # 6 Polarization: -4.64 SS G_CDS: -2.26 Total: -6.90 kcal Atomic # 7 Polarization: -36.84 SS G_CDS: 0.43 Total: -36.41 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.00 Total: -7.02 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.03 Total: 15.70 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.50 Total: -2.27 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -26.09 -7.70 -33.79 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000093097759.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.300 kcal (2) G-P(sol) polarization free energy of solvation -26.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.792 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.508 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds