Wall clock time and date at job start Mon Mar 30 2020 01:07:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.36933 * 119.99743 * 2 1 4 4 H 1.08006 * 120.00082 * 186.29201 * 3 2 1 5 5 C 1.38815 * 120.00307 * 6.29480 * 3 2 1 6 6 N 1.31618 * 119.99645 * 3.78437 * 5 3 2 7 7 Si 1.86796 * 119.99971 * 183.78202 * 5 3 2 8 8 H 1.48501 * 109.47067 * 60.00398 * 7 5 3 9 9 H 1.48503 * 109.46724 * 179.97438 * 7 5 3 10 10 H 1.48495 * 109.47669 * 299.99782 * 7 5 3 11 11 C 1.46504 * 120.00297 * 180.02562 * 2 1 3 12 12 C 1.50700 * 109.47558 * 93.48603 * 11 2 1 13 13 C 1.38365 * 120.01040 * 261.67786 * 12 11 2 14 14 Cl 1.73607 * 120.01237 * 359.97438 * 13 12 11 15 15 C 1.38329 * 119.97710 * 180.02562 * 13 12 11 16 16 C 1.38232 * 119.98380 * 359.97438 * 15 13 12 17 17 C 1.38218 * 120.01461 * 0.02562 * 16 15 13 18 18 C 1.38197 * 120.00281 * 81.69114 * 12 11 2 19 19 N 1.48016 * 119.99248 * 359.97438 * 18 12 11 20 20 O 1.21804 * 119.99693 * 207.97604 * 19 18 12 21 21 O 1.21805 * 120.00341 * 27.98425 * 19 18 12 22 22 H 1.09005 * 109.46840 * 184.75976 * 1 2 3 23 23 H 1.08995 * 109.47282 * 304.75510 * 1 2 3 24 24 H 1.09002 * 109.47081 * 64.76370 * 1 2 3 25 25 H 0.96995 * 119.99628 * 180.02562 * 6 5 3 26 26 H 1.08998 * 109.46564 * 333.48673 * 11 2 1 27 27 H 1.08998 * 109.47119 * 213.48913 * 11 2 1 28 28 H 1.07998 * 120.01051 * 180.02562 * 15 13 12 29 29 H 1.08009 * 119.99397 * 179.97438 * 16 15 13 30 30 H 1.08000 * 119.98884 * 179.72595 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1496 1.1859 0.0000 4 1 3.2248 1.1888 -0.1025 5 6 1.4618 2.3845 0.1318 6 7 0.1609 2.3781 0.3314 7 14 2.3826 4.0062 0.0259 8 1 3.0424 4.1152 -1.3000 9 1 1.4270 5.1300 0.1966 10 1 3.4103 4.0629 1.0963 11 6 2.1976 -1.2687 -0.0006 12 6 2.5236 -1.6600 -1.4189 13 6 1.7273 -2.5748 -2.0849 14 17 0.3526 -3.2726 -1.2868 15 6 2.0275 -2.9338 -3.3866 16 6 3.1226 -2.3782 -4.0214 17 6 3.9177 -1.4645 -3.3556 18 6 3.6183 -1.1054 -2.0545 19 7 4.4701 -0.1266 -1.3422 20 8 5.0790 0.7212 -1.9700 21 8 4.5623 -0.1691 -0.1284 22 1 -0.3633 -1.0242 0.0853 23 1 -0.3633 0.5858 0.8443 24 1 -0.3633 0.4382 -0.9296 25 1 -0.3198 3.2156 0.4232 26 1 1.5828 -2.0433 0.4578 27 1 3.1215 -1.1551 0.5665 28 1 1.4061 -3.6474 -3.9071 29 1 3.3574 -2.6588 -5.0377 30 1 4.7757 -1.0340 -3.8505 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000104325146.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:03 Heat of formation + Delta-G solvation = 61.846697 kcal Electronic energy + Delta-G solvation = -19184.308808 eV Core-core repulsion = 16010.759494 eV Total energy + Delta-G solvation = -3173.549314 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.05634 -38.83496 -36.34427 -36.18854 -35.18303 -32.65954 -31.04667 -30.47386 -26.69066 -26.49203 -25.13325 -22.38177 -21.85793 -20.81466 -18.23524 -17.57293 -17.48833 -16.46824 -15.87739 -15.34713 -15.03492 -14.75298 -13.94514 -13.69635 -13.52101 -12.92387 -12.39389 -11.97306 -11.93703 -11.53066 -11.36979 -11.24741 -10.98510 -10.79031 -10.65222 -10.45519 -10.38434 -10.13740 -9.66310 -9.48862 -9.15713 -8.84762 -8.51104 -7.56986 -6.38326 -3.34594 0.47111 1.36135 2.03791 2.24876 2.72595 3.18570 3.21181 3.27645 3.71418 4.05773 4.80836 4.97932 5.05400 5.16554 5.19472 5.48404 5.62587 5.88980 5.96394 6.33768 6.40280 6.44910 6.48566 6.67866 6.77580 7.11644 7.25467 7.38206 7.68419 7.77120 8.52040 8.95481 9.12172 9.51409 10.43709 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.018554 B = 0.009356 C = 0.007039 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1508.724611 B = 2991.911610 C = 3976.601520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.130 3.870 2 N -0.543 5.543 3 C -0.195 4.195 4 H 0.116 0.884 5 C -0.007 4.007 6 N -0.844 5.844 7 Si 0.929 3.071 8 H -0.269 1.269 9 H -0.281 1.281 10 H -0.267 1.267 11 C 0.143 3.857 12 C -0.069 4.069 13 C -0.015 4.015 14 Cl -0.065 7.065 15 C -0.106 4.106 16 C -0.128 4.128 17 C -0.068 4.068 18 C -0.021 4.021 19 N 0.056 4.944 20 O -0.262 6.262 21 O -0.215 6.215 22 H 0.016 0.984 23 H 0.091 0.909 24 H 0.025 0.975 25 H 0.270 0.730 26 H 0.070 0.930 27 H 0.105 0.895 28 H 0.133 0.867 29 H 0.136 0.864 30 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.221 -8.969 -4.848 10.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.013 4.013 2 N -0.258 5.258 3 C -0.326 4.326 4 H 0.134 0.866 5 C -0.211 4.211 6 N -0.488 5.488 7 Si 0.755 3.245 8 H -0.194 1.194 9 H -0.206 1.206 10 H -0.192 1.192 11 C 0.017 3.983 12 C -0.081 4.081 13 C -0.043 4.043 14 Cl -0.036 7.036 15 C -0.128 4.128 16 C -0.149 4.149 17 C -0.088 4.088 18 C -0.113 4.113 19 N 0.525 4.475 20 O -0.440 6.440 21 O -0.401 6.401 22 H 0.035 0.965 23 H 0.109 0.891 24 H 0.043 0.957 25 H 0.081 0.919 26 H 0.088 0.912 27 H 0.122 0.878 28 H 0.151 0.849 29 H 0.154 0.846 30 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.259 -9.107 -4.903 10.346 hybrid contribution 0.198 1.049 -0.206 1.087 sum -0.061 -8.058 -5.109 9.541 Atomic orbital electron populations 1.21749 0.80442 0.96353 1.02771 1.45114 1.03864 1.01665 1.75128 1.20925 0.93995 0.83488 1.34216 0.86649 1.25485 0.96194 1.00248 0.99173 1.70227 1.07029 1.27600 1.43963 0.85858 0.78891 0.79790 0.79995 1.19368 1.20621 1.19215 1.20786 0.99856 0.87897 0.89770 1.19962 0.90818 0.92953 1.04362 1.20419 0.91650 0.98795 0.93458 1.98340 1.42046 1.82944 1.80280 1.20991 0.98268 1.01091 0.92455 1.20694 0.95545 0.98534 1.00119 1.20795 0.99938 0.96100 0.91990 1.20218 0.96187 1.00883 0.94000 1.42860 1.01806 1.02465 1.00354 1.94391 1.48331 1.32775 1.68488 1.94256 1.68794 1.80156 0.96906 0.96491 0.89059 0.95675 0.91938 0.91202 0.87785 0.84931 0.84594 0.84583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.13 2.99 9.09 59.85 0.54 3.54 16 2 N -0.54 -13.07 2.92 -182.50 -0.53 -13.61 16 3 C -0.19 -5.11 9.36 -15.06 -0.14 -5.25 16 4 H 0.12 3.13 4.05 -52.48 -0.21 2.92 16 5 C -0.01 -0.18 5.44 -17.43 -0.09 -0.27 16 6 N -0.84 -21.69 9.53 55.49 0.53 -21.16 16 7 Si 0.93 21.08 29.55 -169.99 -5.02 16.05 16 8 H -0.27 -6.28 7.11 56.52 0.40 -5.88 16 9 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 10 H -0.27 -6.03 7.11 56.52 0.40 -5.63 16 11 C 0.14 3.03 5.13 -5.19 -0.03 3.00 16 12 C -0.07 -1.39 5.44 -104.59 -0.57 -1.95 16 13 C -0.02 -0.26 6.31 -39.50 -0.25 -0.51 16 14 Cl -0.07 -1.01 26.19 -51.86 -1.36 -2.36 16 15 C -0.11 -1.53 9.83 -39.55 -0.39 -1.92 16 16 C -0.13 -1.78 10.04 -39.59 -0.40 -2.18 16 17 C -0.07 -1.16 9.61 -39.58 -0.38 -1.54 16 18 C -0.02 -0.44 6.61 -79.95 -0.53 -0.97 16 19 N 0.06 1.30 3.22 33.96 0.11 1.41 16 20 O -0.26 -6.37 18.74 -29.46 -0.55 -6.92 16 21 O -0.21 -5.19 13.20 -29.46 -0.39 -5.58 16 22 H 0.02 0.34 6.72 -51.93 -0.35 -0.01 16 23 H 0.09 2.24 6.13 -51.93 -0.32 1.92 16 24 H 0.02 0.62 7.81 -51.93 -0.41 0.21 16 25 H 0.27 6.59 8.31 -40.82 -0.34 6.25 16 26 H 0.07 1.34 6.25 -51.93 -0.32 1.01 16 27 H 0.10 2.31 5.27 -51.93 -0.27 2.04 16 28 H 0.13 1.51 8.06 -52.49 -0.42 1.08 16 29 H 0.14 1.38 8.06 -52.48 -0.42 0.96 16 30 H 0.14 2.12 7.86 -52.49 -0.41 1.70 16 LS Contribution 270.08 15.07 4.07 4.07 Total: -1.00 -27.66 270.08 -7.66 -35.32 By element: Atomic # 1 Polarization: 3.12 SS G_CDS: -2.28 Total: 0.84 kcal Atomic # 6 Polarization: -5.83 SS G_CDS: -2.23 Total: -8.06 kcal Atomic # 7 Polarization: -33.47 SS G_CDS: 0.10 Total: -33.36 kcal Atomic # 8 Polarization: -11.56 SS G_CDS: -0.94 Total: -12.50 kcal Atomic # 14 Polarization: 21.08 SS G_CDS: -5.02 Total: 16.05 kcal Atomic # 17 Polarization: -1.01 SS G_CDS: -1.36 Total: -2.36 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -27.66 -7.66 -35.32 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000104325146.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.166 kcal (2) G-P(sol) polarization free energy of solvation -27.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.320 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds