Wall clock time and date at job start Mon Mar 30 2020 01:30:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47060 * 350.30635 * 3 2 1 5 5 C 1.36952 * 119.99924 * 85.16957 * 4 3 2 6 6 H 1.07999 * 119.99766 * 165.39453 * 5 4 3 7 7 C 1.38979 * 120.00133 * 345.38942 * 5 4 3 8 8 N 1.31407 * 120.00116 * 359.14471 * 7 5 4 9 9 Si 1.86805 * 119.99944 * 179.14472 * 7 5 4 10 10 H 1.48501 * 109.46757 * 0.02562 * 9 7 5 11 11 H 1.48495 * 109.47051 * 120.00167 * 9 7 5 12 12 H 1.48501 * 109.46933 * 240.00352 * 9 7 5 13 13 C 1.34773 * 119.99556 * 265.16682 * 4 3 2 14 14 O 1.21683 * 119.99509 * 183.78960 * 13 4 3 15 15 C 1.46990 * 120.00311 * 3.79361 * 13 4 3 16 16 C 1.36134 * 127.14544 * 43.11982 * 15 13 4 17 17 O 1.33826 * 109.83080 * 180.02562 * 16 15 13 18 18 C 1.34915 * 111.35357 * 0.06492 * 17 16 15 19 19 C 1.38966 * 133.10176 * 179.97438 * 18 17 16 20 20 C 1.37848 * 119.97923 * 180.02562 * 19 18 17 21 21 C 1.38682 * 120.64835 * 0.02562 * 20 19 18 22 22 C 1.37851 * 120.20197 * 359.97438 * 21 20 19 23 23 C 1.39100 * 119.62738 * 359.97438 * 22 21 20 24 24 H 1.08995 * 109.47342 * 230.30494 * 3 2 1 25 25 H 1.09004 * 109.47234 * 110.30215 * 3 2 1 26 26 H 0.97002 * 120.00208 * 179.97438 * 8 7 5 27 27 H 1.07997 * 125.08899 * 0.05916 * 16 15 13 28 28 H 1.08004 * 120.01326 * 0.30104 * 19 18 17 29 29 H 1.07995 * 119.67263 * 180.02562 * 20 19 18 30 30 H 1.08001 * 119.89747 * 180.02562 * 21 20 19 31 31 H 1.08002 * 120.18353 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0970 -1.3606 0.2326 5 6 3.2314 -2.2288 -0.8181 6 1 3.8035 -3.1369 -0.6983 7 6 2.6317 -1.9411 -2.0383 8 7 1.9216 -0.8444 -2.1791 9 14 2.8350 -3.1135 -3.4784 10 1 3.6740 -4.2663 -3.0634 11 1 1.5012 -3.6027 -3.9105 12 1 3.4911 -2.4036 -4.6058 13 6 3.4144 -1.7585 1.4805 14 8 3.8854 -2.8653 1.6648 15 6 3.1917 -0.8556 2.6188 16 6 2.0995 -0.0762 2.8484 17 8 2.2614 0.6082 3.9869 18 6 3.4479 0.3275 4.5644 19 6 4.0661 0.7699 5.7277 20 6 5.3139 0.2935 6.0687 21 6 5.9643 -0.6268 5.2605 22 6 5.3669 -1.0773 4.1027 23 6 4.1075 -0.6039 3.7497 24 1 2.9711 0.6571 0.7907 25 1 2.9712 0.3574 -0.9638 26 1 1.5033 -0.6434 -3.0310 27 1 1.2319 -0.0191 2.2078 28 1 3.5672 1.4835 6.3668 29 1 5.7895 0.6404 6.9741 30 1 6.9416 -0.9923 5.5395 31 1 5.8736 -1.7943 3.4737 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000113161862.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:45 Heat of formation + Delta-G solvation = 47.088000 kcal Electronic energy + Delta-G solvation = -19855.351371 eV Core-core repulsion = 16683.594921 eV Total energy + Delta-G solvation = -3171.756450 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.079 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -42.29609 -38.75598 -37.71208 -35.90742 -34.39978 -32.72369 -31.71297 -30.23784 -29.21810 -27.52275 -25.32207 -23.28873 -22.33248 -22.02807 -19.24745 -18.09622 -17.51041 -16.98856 -16.38022 -15.97750 -15.70517 -15.41494 -14.56882 -14.16761 -14.01594 -13.71445 -13.48320 -13.17428 -12.83044 -12.34651 -12.15159 -12.01860 -11.78297 -11.59312 -11.31077 -11.29804 -10.81721 -10.63653 -10.53712 -10.42135 -9.80545 -9.38865 -8.86484 -8.51811 -8.24621 -7.97335 -6.56594 -4.14669 1.01624 1.46240 2.22370 2.88788 3.06083 3.16467 3.22257 3.58490 3.64082 3.87158 3.98581 4.03933 4.57404 4.69220 4.81614 5.00820 5.03959 5.14147 5.33986 5.41644 5.52758 5.60325 5.72325 5.93972 6.07056 6.33148 6.37782 6.51921 6.60146 6.69445 6.75657 7.28469 7.33632 7.76056 8.17048 8.66898 8.86748 9.05094 9.59208 10.42814 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.028655 B = 0.005903 C = 0.005087 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 976.896505 B = 4741.956211 C = 5502.982103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.481 5.481 2 C 0.254 3.746 3 C 0.214 3.786 4 N -0.435 5.435 5 C -0.297 4.297 6 H 0.114 0.886 7 C 0.028 3.972 8 N -0.892 5.892 9 Si 0.941 3.059 10 H -0.266 1.266 11 H -0.280 1.280 12 H -0.278 1.278 13 C 0.518 3.482 14 O -0.566 6.566 15 C -0.190 4.190 16 C 0.030 3.970 17 O -0.188 6.188 18 C 0.045 3.955 19 C -0.110 4.110 20 C -0.099 4.099 21 C -0.141 4.141 22 C -0.057 4.057 23 C -0.094 4.094 24 H 0.078 0.922 25 H 0.146 0.854 26 H 0.276 0.724 27 H 0.208 0.792 28 H 0.130 0.870 29 H 0.132 0.868 30 H 0.128 0.872 31 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.089 5.804 9.825 12.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.163 5.163 2 C -0.063 4.063 3 C 0.087 3.913 4 N -0.155 5.155 5 C -0.424 4.424 6 H 0.131 0.869 7 C -0.174 4.174 8 N -0.533 5.533 9 Si 0.767 3.233 10 H -0.190 1.190 11 H -0.206 1.206 12 H -0.204 1.204 13 C 0.307 3.693 14 O -0.449 6.449 15 C -0.194 4.194 16 C -0.037 4.037 17 O -0.088 6.088 18 C -0.002 4.002 19 C -0.129 4.129 20 C -0.117 4.117 21 C -0.159 4.159 22 C -0.075 4.075 23 C -0.095 4.095 24 H 0.096 0.904 25 H 0.163 0.837 26 H 0.087 0.913 27 H 0.224 0.776 28 H 0.147 0.853 29 H 0.150 0.850 30 H 0.146 0.854 31 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.389 5.492 9.828 12.084 hybrid contribution 0.224 -0.531 -1.089 1.233 sum 4.613 4.961 8.739 11.057 Atomic orbital electron populations 1.80952 1.13360 1.08856 1.13106 1.29216 0.95327 0.92232 0.89551 1.19164 0.81651 0.85542 1.04968 1.43555 1.55807 1.10451 1.05663 1.19940 1.30571 1.03608 0.88244 0.86858 1.25370 0.95054 0.97377 0.99551 1.69617 1.32866 1.24405 1.26459 0.85604 0.78283 0.79730 0.79667 1.19009 1.20622 1.20366 1.16883 0.84982 0.86251 0.81225 1.90663 1.48814 1.21399 1.84032 1.21326 0.95948 1.03208 0.98948 1.24609 1.00011 0.92604 0.86496 1.83836 1.34182 1.57626 1.33165 1.19635 0.85314 0.98817 0.96392 1.19858 0.95659 1.03062 0.94290 1.20854 0.93766 0.97340 0.99728 1.21028 1.00584 0.99098 0.95161 1.20658 0.92690 0.97941 0.96188 1.19569 0.96132 0.99131 0.94712 0.90428 0.83713 0.91310 0.77567 0.85253 0.85044 0.85398 0.84872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -11.10 18.48 42.15 0.78 -10.32 16 2 C 0.25 5.52 10.60 -20.76 -0.22 5.30 16 3 C 0.21 4.35 4.77 -6.83 -0.03 4.31 16 4 N -0.44 -10.24 2.59 -119.31 -0.31 -10.54 16 5 C -0.30 -7.51 9.46 -14.99 -0.14 -7.65 16 6 H 0.11 3.01 7.23 -52.49 -0.38 2.63 16 7 C 0.03 0.67 5.35 -17.46 -0.09 0.58 16 8 N -0.89 -21.54 8.09 55.50 0.45 -21.09 16 9 Si 0.94 19.61 29.55 -169.99 -5.02 14.59 16 10 H -0.27 -5.56 7.11 56.52 0.40 -5.15 16 11 H -0.28 -6.00 7.11 56.52 0.40 -5.60 16 12 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 13 C 0.52 12.19 7.54 -12.72 -0.10 12.09 16 14 O -0.57 -15.07 16.73 5.20 0.09 -14.98 16 15 C -0.19 -3.79 5.20 -103.26 -0.54 -4.32 16 16 C 0.03 0.54 9.91 29.98 0.30 0.84 16 17 O -0.19 -3.14 10.53 5.27 0.06 -3.08 16 18 C 0.05 0.73 7.39 -38.56 -0.28 0.44 16 19 C -0.11 -1.38 10.06 -39.45 -0.40 -1.78 16 20 C -0.10 -1.09 10.01 -39.56 -0.40 -1.48 16 21 C -0.14 -1.72 10.04 -39.56 -0.40 -2.12 16 22 C -0.06 -0.90 10.09 -39.40 -0.40 -1.29 16 23 C -0.09 -1.68 6.39 -104.98 -0.67 -2.35 16 24 H 0.08 1.33 5.96 -51.93 -0.31 1.02 16 25 H 0.15 3.02 6.29 -51.93 -0.33 2.69 16 26 H 0.28 6.49 8.31 -40.82 -0.34 6.15 16 27 H 0.21 3.67 5.25 -52.49 -0.28 3.40 16 28 H 0.13 1.28 8.06 -52.48 -0.42 0.85 16 29 H 0.13 0.99 8.06 -52.49 -0.42 0.57 16 30 H 0.13 1.20 8.06 -52.49 -0.42 0.77 16 31 H 0.13 2.16 8.06 -52.49 -0.42 1.74 16 LS Contribution 279.39 15.07 4.21 4.21 Total: -1.00 -29.59 279.39 -5.24 -34.82 By element: Atomic # 1 Polarization: 5.95 SS G_CDS: -2.12 Total: 3.83 kcal Atomic # 6 Polarization: 5.93 SS G_CDS: -3.37 Total: 2.56 kcal Atomic # 7 Polarization: -42.87 SS G_CDS: 0.92 Total: -41.96 kcal Atomic # 8 Polarization: -18.20 SS G_CDS: 0.14 Total: -18.06 kcal Atomic # 14 Polarization: 19.61 SS G_CDS: -5.02 Total: 14.59 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -29.59 -5.24 -34.82 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000113161862.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.913 kcal (2) G-P(sol) polarization free energy of solvation -29.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.825 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.088 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds