Wall clock time and date at job start Mon Mar 30 2020 01:07:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.36941 * 120.00095 * 2 1 4 4 H 1.08001 * 119.99840 * 202.37029 * 3 2 1 5 5 C 1.38816 * 119.99913 * 22.36970 * 3 2 1 6 6 N 1.31616 * 119.99835 * 11.33860 * 5 3 2 7 7 Si 1.86796 * 119.99818 * 191.33686 * 5 3 2 8 8 H 1.48503 * 109.47327 * 0.02562 * 7 5 3 9 9 H 1.48505 * 109.47071 * 119.99790 * 7 5 3 10 10 H 1.48489 * 109.47410 * 239.99859 * 7 5 3 11 11 C 1.46498 * 120.00277 * 179.97438 * 2 1 3 12 12 C 1.50702 * 109.47489 * 270.00645 * 11 2 1 13 13 C 1.38263 * 119.98540 * 270.29419 * 12 11 2 14 14 C 1.38194 * 120.01447 * 180.25357 * 13 12 11 15 15 C 1.38368 * 119.98189 * 359.46530 * 14 13 12 16 16 Cl 1.73609 * 120.00986 * 180.27351 * 15 14 13 17 17 C 1.38327 * 119.97726 * 0.25940 * 15 14 13 18 18 N 1.48020 * 120.00601 * 179.97438 * 17 15 14 19 19 O 1.21799 * 120.00096 * 179.97438 * 18 17 15 20 20 O 1.21803 * 120.00084 * 0.02562 * 18 17 15 21 21 C 1.38223 * 119.98949 * 89.99319 * 12 11 2 22 22 H 1.08999 * 109.47341 * 274.20555 * 1 2 3 23 23 H 1.09003 * 109.47347 * 34.20432 * 1 2 3 24 24 H 1.08993 * 109.47227 * 154.20685 * 1 2 3 25 25 H 0.96999 * 119.99805 * 180.02562 * 6 5 3 26 26 H 1.08994 * 109.47448 * 150.00038 * 11 2 1 27 27 H 1.09001 * 109.46740 * 30.00103 * 11 2 1 28 28 H 1.08007 * 119.99441 * 359.97438 * 13 12 11 29 29 H 1.07995 * 120.00733 * 179.75104 * 14 13 12 30 30 H 1.07997 * 119.98991 * 0.02972 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 3.1687 1.2211 -0.3560 5 6 1.5339 2.3429 0.4575 6 7 0.3845 2.2689 1.0943 7 14 2.3369 4.0047 0.1694 8 1 3.6138 3.8169 -0.5649 9 1 1.4269 4.8618 -0.6322 10 1 2.6078 4.6567 1.4757 11 6 2.1975 -1.2687 0.0006 12 6 2.4486 -1.7032 1.4216 13 6 3.5979 -1.2986 2.0750 14 6 3.8313 -1.7011 3.3763 15 6 2.9091 -2.5000 4.0290 16 17 3.1982 -3.0001 5.6661 17 6 1.7567 -2.8998 3.3766 18 7 0.7701 -3.7549 4.0740 19 8 -0.2448 -4.1065 3.4996 20 8 0.9727 -4.1062 5.2225 21 6 1.5269 -2.5010 2.0732 22 1 -0.3634 0.0754 1.0249 23 1 -0.3634 0.8499 -0.5777 24 1 -0.3633 -0.9252 -0.4471 25 1 -0.0460 3.0773 1.4137 26 1 3.1499 -1.1386 -0.5133 27 1 1.6084 -2.0285 -0.5130 28 1 4.3157 -0.6716 1.5669 29 1 4.7310 -1.3883 3.8853 30 1 0.6273 -2.8131 1.5637 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000153649125.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:09 Heat of formation + Delta-G solvation = 45.317275 kcal Electronic energy + Delta-G solvation = -18319.357045 eV Core-core repulsion = 15145.090961 eV Total energy + Delta-G solvation = -3174.266084 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.85061 -39.31277 -36.74658 -36.15617 -35.68504 -32.39125 -31.68930 -30.41480 -26.62489 -26.07363 -25.89920 -22.63344 -22.21787 -20.85243 -18.56940 -18.30989 -17.25299 -17.04143 -16.57698 -15.50103 -15.17591 -14.47511 -14.01173 -13.77693 -13.49158 -13.25649 -12.51290 -12.10112 -11.85195 -11.50664 -11.45475 -11.32946 -11.07116 -11.02999 -10.87067 -10.80365 -10.54880 -10.25339 -10.18827 -10.13520 -9.35457 -8.85249 -8.66465 -7.13261 -6.04925 -3.46325 0.11208 1.10644 1.60328 1.67539 2.06505 3.19665 3.26915 3.29377 3.49946 4.25098 4.47823 4.84615 5.08398 5.15307 5.21646 5.30766 5.36567 5.63492 5.81387 5.95328 6.10776 6.28149 6.47578 6.53021 6.64889 6.76833 7.13633 7.46396 7.54114 7.97420 8.05668 8.88881 9.49887 9.97689 10.97975 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.023648 B = 0.005726 C = 0.005249 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1183.736632 B = 4888.389785 C = 5332.760525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.156 3.844 2 N -0.583 5.583 3 C -0.259 4.259 4 H 0.076 0.924 5 C 0.006 3.994 6 N -0.892 5.892 7 Si 0.910 3.090 8 H -0.275 1.275 9 H -0.286 1.286 10 H -0.288 1.288 11 C 0.177 3.823 12 C -0.079 4.079 13 C -0.048 4.048 14 C -0.110 4.110 15 C -0.011 4.011 16 Cl -0.032 7.032 17 C -0.042 4.042 18 N 0.034 4.966 19 O -0.176 6.176 20 O -0.153 6.153 21 C -0.038 4.038 22 H 0.031 0.969 23 H 0.052 0.948 24 H 0.004 0.996 25 H 0.258 0.742 26 H 0.066 0.934 27 H 0.058 0.942 28 H 0.145 0.855 29 H 0.146 0.854 30 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.253 -8.062 1.941 10.386 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 N -0.301 5.301 3 C -0.388 4.388 4 H 0.094 0.906 5 C -0.195 4.195 6 N -0.534 5.534 7 Si 0.739 3.261 8 H -0.200 1.200 9 H -0.212 1.212 10 H -0.214 1.214 11 C 0.049 3.951 12 C -0.085 4.085 13 C -0.068 4.068 14 C -0.129 4.129 15 C -0.040 4.040 16 Cl -0.003 7.003 17 C -0.127 4.127 18 N 0.551 4.449 19 O -0.387 6.387 20 O -0.371 6.371 21 C -0.058 4.058 22 H 0.049 0.951 23 H 0.071 0.929 24 H 0.023 0.977 25 H 0.068 0.932 26 H 0.084 0.916 27 H 0.076 0.924 28 H 0.163 0.837 29 H 0.164 0.836 30 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 6.543 -7.493 1.722 10.096 hybrid contribution 0.008 0.864 0.610 1.057 sum 6.551 -6.630 2.331 9.607 Atomic orbital electron populations 1.20952 0.81680 0.96462 0.99774 1.44383 1.02382 1.00320 1.83033 1.19374 0.98743 0.84765 1.35939 0.90640 1.25192 0.97519 0.99157 0.97598 1.70079 1.17277 1.27848 1.38208 0.86104 0.78842 0.83475 0.77677 1.19965 1.21213 1.21426 1.20167 0.97672 0.89086 0.88148 1.21500 0.91820 0.92413 1.02799 1.21400 0.96897 0.95406 0.93065 1.21081 0.99014 0.97535 0.95265 1.20509 0.94598 1.00487 0.88456 1.98412 1.95610 1.89527 1.16717 1.20824 0.92226 1.04507 0.95108 1.43517 1.01117 0.99450 1.00809 1.94514 1.16501 1.59200 1.68476 1.94560 1.82418 1.58335 1.01776 1.20908 1.00043 0.94583 0.90316 0.95064 0.92894 0.97707 0.93167 0.91572 0.92350 0.83684 0.83605 0.83157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.51 9.01 59.84 0.54 4.05 16 2 N -0.58 -12.93 2.91 -182.51 -0.53 -13.46 16 3 C -0.26 -6.29 9.67 -15.06 -0.15 -6.44 16 4 H 0.08 1.75 7.84 -52.49 -0.41 1.34 16 5 C 0.01 0.15 5.13 -17.43 -0.09 0.06 16 6 N -0.89 -24.23 10.59 55.49 0.59 -23.65 16 7 Si 0.91 20.10 29.57 -169.99 -5.03 15.08 16 8 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 9 H -0.29 -6.41 7.11 56.52 0.40 -6.01 16 10 H -0.29 -6.49 7.11 56.52 0.40 -6.09 16 11 C 0.18 3.05 5.83 -5.19 -0.03 3.02 16 12 C -0.08 -1.32 5.46 -104.62 -0.57 -1.89 16 13 C -0.05 -0.72 9.70 -39.59 -0.38 -1.10 16 14 C -0.11 -1.56 9.83 -39.55 -0.39 -1.94 16 15 C -0.01 -0.17 6.32 -39.50 -0.25 -0.42 16 16 Cl -0.03 -0.47 25.94 -51.86 -1.35 -1.82 16 17 C -0.04 -0.74 6.85 -79.92 -0.55 -1.28 16 18 N 0.03 0.63 4.45 33.98 0.15 0.78 16 19 O -0.18 -3.31 18.45 -29.46 -0.54 -3.85 16 20 O -0.15 -2.82 16.02 -29.46 -0.47 -3.30 16 21 C -0.04 -0.65 9.21 -39.59 -0.36 -1.01 16 22 H 0.03 0.78 7.42 -51.93 -0.39 0.40 16 23 H 0.05 1.29 7.19 -51.93 -0.37 0.92 16 24 H 0.00 0.09 7.84 -51.93 -0.41 -0.32 16 25 H 0.26 6.84 8.31 -40.82 -0.34 6.50 16 26 H 0.07 1.05 7.98 -51.93 -0.41 0.63 16 27 H 0.06 0.90 7.81 -51.93 -0.41 0.49 16 28 H 0.15 1.97 8.06 -52.48 -0.42 1.54 16 29 H 0.15 1.64 8.06 -52.49 -0.42 1.22 16 30 H 0.15 2.45 7.61 -52.49 -0.40 2.05 16 LS Contribution 284.39 15.07 4.29 4.29 Total: -1.00 -27.76 284.39 -7.90 -35.66 By element: Atomic # 1 Polarization: 0.01 SS G_CDS: -2.78 Total: -2.77 kcal Atomic # 6 Polarization: -4.73 SS G_CDS: -2.23 Total: -6.96 kcal Atomic # 7 Polarization: -36.54 SS G_CDS: 0.21 Total: -36.33 kcal Atomic # 8 Polarization: -6.13 SS G_CDS: -1.02 Total: -7.15 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -5.03 Total: 15.08 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -1.35 Total: -1.82 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -27.76 -7.90 -35.66 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000153649125.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.980 kcal (2) G-P(sol) polarization free energy of solvation -27.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.221 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.903 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.317 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds