Wall clock time and date at job start Mon Mar 30 2020 01:05:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09003 * 109.47007 * 2 1 4 4 C 1.50700 * 109.47154 * 240.00273 * 2 1 3 5 5 H 1.07994 * 119.99433 * 239.99771 * 4 2 1 6 6 C 1.37872 * 120.00247 * 60.00137 * 4 2 1 7 7 N 1.31521 * 120.00013 * 0.02562 * 6 4 2 8 8 Si 1.86796 * 120.00225 * 179.97438 * 6 4 2 9 9 H 1.48497 * 109.47098 * 89.99905 * 8 6 4 10 10 H 1.48495 * 109.47406 * 209.99928 * 8 6 4 11 11 H 1.48500 * 109.47264 * 330.00179 * 8 6 4 12 12 N 1.46499 * 109.46896 * 120.00049 * 2 1 3 13 13 C 1.39755 * 119.99867 * 275.00103 * 12 2 1 14 14 C 1.38883 * 120.07913 * 0.02562 * 13 12 2 15 15 C 1.38111 * 119.93490 * 180.02562 * 14 13 12 16 16 C 1.38298 * 120.09796 * 0.02562 * 15 14 13 17 17 N 1.48007 * 119.91990 * 180.02562 * 16 15 14 18 18 O 1.21790 * 120.00190 * 0.02562 * 17 16 15 19 19 O 1.21804 * 119.99631 * 179.97438 * 17 16 15 20 20 C 1.38267 * 120.15159 * 0.02562 * 16 15 14 21 21 C 1.38206 * 120.06713 * 359.71967 * 20 16 15 22 22 Cl 1.73597 * 120.05148 * 180.30294 * 21 20 16 23 23 H 1.09005 * 109.46664 * 59.99747 * 1 2 3 24 24 H 1.08995 * 109.46863 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.47413 * 300.00100 * 1 2 3 26 26 H 0.97003 * 119.99964 * 180.02562 * 7 6 4 27 27 H 0.96995 * 119.99956 * 95.27664 * 12 2 1 28 28 H 1.07999 * 120.03184 * 0.02562 * 14 13 12 29 29 H 1.08007 * 119.95210 * 180.02562 * 15 14 13 30 30 H 1.08003 * 119.96429 * 179.97438 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7103 -1.2305 5 1 2.6533 -1.5884 -1.1313 6 6 1.6994 -0.2393 -2.4827 7 7 0.9437 0.8304 -2.6034 8 14 2.3226 -1.1194 -4.0079 9 1 1.3450 -2.1613 -4.4124 10 1 2.4874 -0.1400 -5.1120 11 1 3.6310 -1.7564 -3.7120 12 7 2.0183 -0.6906 1.1962 13 6 2.1517 0.0066 2.4000 14 6 1.8214 1.3540 2.4644 15 6 1.9549 2.0402 3.6555 16 6 2.4174 1.3877 4.7837 17 7 2.5584 2.1268 6.0582 18 8 2.2668 3.3081 6.1127 19 8 2.9652 1.5534 7.0529 20 6 2.7484 0.0466 4.7237 21 6 2.6124 -0.6477 3.5365 22 17 3.0206 -2.3334 3.4636 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3634 0.5138 0.8899 26 1 0.7091 1.1616 -3.4844 27 1 2.2528 -1.6308 1.1516 28 1 1.4605 1.8647 1.5838 29 1 1.6977 3.0880 3.7059 30 1 3.1097 -0.4598 5.6065 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000195153035.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:15 Heat of formation + Delta-G solvation = 5.484872 kcal Electronic energy + Delta-G solvation = -17879.826752 eV Core-core repulsion = 14703.833405 eV Total energy + Delta-G solvation = -3175.993346 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.82991 -39.60637 -36.52546 -36.23872 -36.21982 -33.25997 -31.05395 -30.68499 -28.60094 -25.77763 -25.18304 -23.29166 -22.07925 -20.54540 -19.12645 -18.47142 -17.70527 -17.21419 -16.41442 -15.80133 -15.17678 -14.85117 -14.18725 -13.99937 -13.69305 -13.22937 -12.76979 -12.38187 -11.72530 -11.62585 -11.47239 -11.30539 -11.27035 -11.16895 -11.02419 -10.88675 -10.79240 -10.62139 -10.44691 -10.09918 -9.41875 -9.09481 -8.78275 -7.40847 -6.43107 -4.53354 0.25169 1.03976 1.66864 1.72653 2.18977 3.08008 3.16199 3.17678 3.46558 3.67051 4.14397 4.55681 4.79372 4.91022 4.99944 5.09207 5.55292 5.64532 5.88247 6.00110 6.29900 6.33688 6.55596 6.62207 6.71809 6.92583 7.34512 7.42213 7.58843 7.78689 7.97997 8.08140 8.51114 9.15478 10.62947 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.026869 B = 0.004861 C = 0.004288 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1041.829572 B = 5758.817046 C = 6528.022805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.256 3.744 3 H 0.050 0.950 4 C -0.540 4.540 5 H 0.064 0.936 6 C 0.071 3.929 7 N -0.883 5.883 8 Si 0.906 3.094 9 H -0.277 1.277 10 H -0.283 1.283 11 H -0.272 1.272 12 N -0.680 5.680 13 C 0.292 3.708 14 C -0.192 4.192 15 C 0.002 3.998 16 C -0.127 4.127 17 N 0.052 4.948 18 O -0.186 6.186 19 O -0.192 6.192 20 C 0.009 3.991 21 C -0.139 4.139 22 Cl -0.056 7.056 23 H 0.097 0.903 24 H 0.034 0.966 25 H 0.017 0.983 26 H 0.268 0.732 27 H 0.402 0.598 28 H 0.159 0.841 29 H 0.151 0.849 30 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.313 -1.699 8.211 8.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C 0.154 3.846 3 H 0.068 0.932 4 C -0.578 4.578 5 H 0.082 0.918 6 C -0.133 4.133 7 N -0.519 5.519 8 Si 0.733 3.267 9 H -0.203 1.203 10 H -0.208 1.208 11 H -0.197 1.197 12 N -0.295 5.295 13 C 0.172 3.828 14 C -0.215 4.215 15 C -0.019 4.019 16 C -0.215 4.215 17 N 0.563 4.437 18 O -0.396 6.396 19 O -0.401 6.401 20 C -0.012 4.012 21 C -0.172 4.172 22 Cl -0.027 7.027 23 H 0.116 0.884 24 H 0.053 0.947 25 H 0.036 0.964 26 H 0.078 0.922 27 H 0.239 0.761 28 H 0.176 0.824 29 H 0.168 0.832 30 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 1.111 -2.006 7.186 7.543 hybrid contribution 0.446 -0.813 -0.554 1.081 sum 1.557 -2.820 6.631 7.372 Atomic orbital electron populations 1.22221 0.97600 1.00283 1.01284 1.19128 0.91499 0.93846 0.80089 0.93203 1.21085 1.33179 1.13752 0.89820 0.91785 1.24852 0.94443 0.94843 0.99192 1.69842 1.35403 1.22191 1.24512 0.86366 0.79332 0.79336 0.81713 1.20326 1.20819 1.19703 1.46355 1.62709 1.13221 1.07260 1.18138 0.87103 0.91552 0.86052 1.20777 1.09477 0.92317 0.98968 1.20761 0.90913 1.00823 0.89435 1.20359 1.22628 0.93317 0.85232 1.43406 0.97067 1.00759 1.02481 1.94489 1.54023 0.99390 1.91747 1.94486 1.48909 1.70560 1.26156 1.20356 0.92453 0.91039 0.97359 1.19926 1.15896 0.87167 0.94239 1.98351 1.92673 1.13400 1.98314 0.88430 0.94673 0.96417 0.92166 0.76115 0.82376 0.83151 0.82984 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.18 9.21 37.16 0.34 -2.84 16 2 C 0.26 5.34 2.25 -69.08 -0.16 5.19 16 3 H 0.05 1.11 6.49 -51.93 -0.34 0.77 16 4 C -0.54 -12.74 8.73 -34.44 -0.30 -13.04 16 5 H 0.06 1.49 7.73 -52.49 -0.41 1.09 16 6 C 0.07 1.71 5.30 -17.82 -0.09 1.62 16 7 N -0.88 -22.02 11.32 55.43 0.63 -21.39 16 8 Si 0.91 19.07 29.54 -169.99 -5.02 14.04 16 9 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 10 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 11 H -0.27 -5.72 7.11 56.52 0.40 -5.32 16 12 N -0.68 -12.05 5.20 -53.25 -0.28 -12.32 16 13 C 0.29 4.67 6.64 -83.73 -0.56 4.11 16 14 C -0.19 -2.90 8.85 -39.39 -0.35 -3.24 16 15 C 0.00 0.02 9.55 -39.61 -0.38 -0.36 16 16 C -0.13 -1.90 6.85 -79.92 -0.55 -2.45 16 17 N 0.05 0.85 4.45 33.98 0.15 1.00 16 18 O -0.19 -3.11 18.44 -29.46 -0.54 -3.65 16 19 O -0.19 -3.20 18.44 -29.46 -0.54 -3.75 16 20 C 0.01 0.12 9.33 -39.58 -0.37 -0.24 16 21 C -0.14 -2.03 6.34 -39.31 -0.25 -2.28 16 22 Cl -0.06 -0.75 27.60 -51.86 -1.43 -2.18 16 23 H 0.10 2.22 6.07 -51.93 -0.32 1.91 16 24 H 0.03 0.71 8.14 -51.93 -0.42 0.29 16 25 H 0.02 0.32 7.71 -51.93 -0.40 -0.09 16 26 H 0.27 6.43 8.31 -40.82 -0.34 6.09 16 27 H 0.40 6.89 7.21 -40.82 -0.29 6.59 16 28 H 0.16 2.43 6.12 -52.49 -0.32 2.11 16 29 H 0.15 1.84 7.60 -52.48 -0.40 1.44 16 30 H 0.15 1.91 7.60 -52.48 -0.40 1.52 16 LS Contribution 282.34 15.07 4.25 4.25 Total: -1.00 -24.27 282.34 -7.87 -32.14 By element: Atomic # 1 Polarization: 7.82 SS G_CDS: -2.43 Total: 5.39 kcal Atomic # 6 Polarization: -10.88 SS G_CDS: -2.66 Total: -13.54 kcal Atomic # 7 Polarization: -33.21 SS G_CDS: 0.50 Total: -32.71 kcal Atomic # 8 Polarization: -6.31 SS G_CDS: -1.09 Total: -7.40 kcal Atomic # 14 Polarization: 19.07 SS G_CDS: -5.02 Total: 14.04 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.43 Total: -2.18 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -24.27 -7.87 -32.14 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000195153035.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.621 kcal (2) G-P(sol) polarization free energy of solvation -24.268 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.136 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds