Wall clock time and date at job start Mon Mar 30 2020 01:05:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08997 * 109.46996 * 2 1 4 4 C 1.50707 * 109.47141 * 239.99685 * 2 1 3 5 5 H 1.07995 * 119.99843 * 240.00374 * 4 2 1 6 6 C 1.37878 * 119.99538 * 60.00311 * 4 2 1 7 7 N 1.31513 * 120.00371 * 359.97438 * 6 4 2 8 8 Si 1.86798 * 119.99352 * 179.97438 * 6 4 2 9 9 H 1.48499 * 109.47170 * 60.00060 * 8 6 4 10 10 H 1.48500 * 109.46710 * 180.02562 * 8 6 4 11 11 H 1.48496 * 109.47057 * 299.99658 * 8 6 4 12 12 N 1.46502 * 109.46871 * 120.00093 * 2 1 3 13 13 C 1.39748 * 119.99675 * 274.99853 * 12 2 1 14 14 C 1.38918 * 120.06243 * 354.31425 * 13 12 2 15 15 C 1.38083 * 119.93505 * 179.97438 * 14 13 12 16 16 C 1.38405 * 120.06650 * 0.27019 * 15 14 13 17 17 Cl 1.73592 * 119.94147 * 179.72597 * 16 15 14 18 18 C 1.38366 * 120.11768 * 359.45142 * 16 15 14 19 19 C 1.38122 * 120.06149 * 0.54966 * 18 16 15 20 20 N 1.48012 * 120.03025 * 179.70027 * 19 18 16 21 21 O 1.21801 * 119.99551 * 142.55195 * 20 19 18 22 22 O 1.21794 * 119.99974 * 322.55482 * 20 19 18 23 23 H 1.09005 * 109.47204 * 60.00272 * 1 2 3 24 24 H 1.09002 * 109.47408 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47236 * 300.00227 * 1 2 3 26 26 H 0.96994 * 120.00209 * 179.97438 * 7 6 4 27 27 H 0.96997 * 120.00545 * 94.99560 * 12 2 1 28 28 H 1.07992 * 120.02999 * 359.95612 * 14 13 12 29 29 H 1.08004 * 119.96868 * 179.97438 * 15 14 13 30 30 H 1.08000 * 119.96745 * 180.29074 * 18 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0324 -0.7105 -1.2305 5 1 2.6532 -1.5886 -1.1313 6 6 1.6993 -0.2394 -2.4827 7 7 0.9428 0.8296 -2.6034 8 14 2.3226 -1.1197 -4.0078 9 1 1.8281 -2.5199 -4.0080 10 1 1.8280 -0.4193 -5.2203 11 1 3.8075 -1.1191 -4.0076 12 7 2.0183 -0.6906 1.1962 13 6 2.1517 0.0066 2.4000 14 6 1.9356 1.3783 2.4373 15 6 2.0676 2.0645 3.6283 16 6 2.4204 1.3879 4.7830 17 17 2.5925 2.2549 6.2770 18 6 2.6307 0.0207 4.7498 19 6 2.5000 -0.6708 3.5613 20 7 2.7316 -2.1322 3.5252 21 8 2.0392 -2.8412 2.8171 22 8 3.6144 -2.6258 4.2037 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 0.7088 1.1612 -3.4844 27 1 2.2489 -1.6318 1.1527 28 1 1.6648 1.9075 1.5357 29 1 1.9001 3.1311 3.6578 30 1 2.9013 -0.5056 5.6532 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000276263174.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:16 Heat of formation + Delta-G solvation = 10.627671 kcal Electronic energy + Delta-G solvation = -18235.140130 eV Core-core repulsion = 15059.369793 eV Total energy + Delta-G solvation = -3175.770338 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.90012 -39.45559 -36.92705 -36.24436 -35.68688 -33.08679 -31.82732 -30.20540 -28.01561 -26.10098 -25.42351 -23.06793 -22.14325 -20.44774 -19.09876 -18.43617 -17.77914 -16.95093 -16.48859 -15.56038 -15.41072 -14.81141 -14.36227 -13.95127 -13.67936 -12.71003 -12.64969 -12.61301 -11.94805 -11.80095 -11.31321 -11.21153 -11.17342 -11.14876 -10.95930 -10.83480 -10.72901 -10.49400 -10.37595 -9.74111 -9.48387 -9.31920 -8.70873 -7.31675 -6.36854 -4.46362 0.31958 1.24489 1.44064 1.65701 2.21538 3.15850 3.20680 3.23228 3.43627 3.71702 4.20888 4.52188 4.80949 4.96936 5.01090 5.10356 5.52136 5.65192 5.93055 6.05215 6.34890 6.37298 6.62335 6.65934 6.73932 6.99060 7.41322 7.49642 7.65750 7.84501 7.95025 8.16385 8.57836 9.21956 10.69272 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.023537 B = 0.005308 C = 0.004564 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1189.306481 B = 5274.008264 C = 6133.885768 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.257 3.743 3 H 0.049 0.951 4 C -0.539 4.539 5 H 0.064 0.936 6 C 0.071 3.929 7 N -0.885 5.885 8 Si 0.906 3.094 9 H -0.273 1.273 10 H -0.284 1.284 11 H -0.275 1.275 12 N -0.682 5.682 13 C 0.297 3.703 14 C -0.183 4.183 15 C -0.017 4.017 16 C -0.114 4.114 17 Cl -0.069 7.069 18 C -0.002 4.002 19 C -0.138 4.138 20 N 0.046 4.954 21 O -0.176 6.176 22 O -0.171 6.171 23 H 0.097 0.903 24 H 0.037 0.963 25 H 0.015 0.985 26 H 0.268 0.732 27 H 0.406 0.594 28 H 0.159 0.841 29 H 0.144 0.856 30 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.138 3.536 11.374 11.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C 0.156 3.844 3 H 0.066 0.934 4 C -0.577 4.577 5 H 0.082 0.918 6 C -0.133 4.133 7 N -0.522 5.522 8 Si 0.733 3.267 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.200 1.200 12 N -0.301 5.301 13 C 0.176 3.824 14 C -0.206 4.206 15 C -0.038 4.038 16 C -0.144 4.144 17 Cl -0.041 7.041 18 C -0.023 4.023 19 C -0.229 4.229 20 N 0.561 4.439 21 O -0.386 6.386 22 O -0.386 6.386 23 H 0.116 0.884 24 H 0.056 0.944 25 H 0.034 0.966 26 H 0.078 0.922 27 H 0.245 0.755 28 H 0.176 0.824 29 H 0.162 0.838 30 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 0.849 4.436 11.050 11.938 hybrid contribution 0.448 -1.122 -0.682 1.388 sum 1.298 3.314 10.368 10.962 Atomic orbital electron populations 1.22203 0.97433 1.00494 1.01075 1.19119 0.91592 0.93634 0.80036 0.93360 1.21071 1.33110 1.13694 0.89837 0.91834 1.24842 0.94421 0.94867 0.99152 1.69830 1.35463 1.22339 1.24541 0.86410 0.79279 0.79794 0.81204 1.19844 1.20920 1.20022 1.46542 1.62472 1.13810 1.07251 1.17800 0.87337 0.92032 0.85245 1.20886 1.08978 0.91024 0.99698 1.21092 0.92158 1.00577 0.89949 1.20064 1.14528 0.91290 0.88540 1.98345 1.96793 1.76183 1.32739 1.20260 0.93352 0.92494 0.96152 1.20113 1.26554 0.79774 0.96491 1.43358 0.98641 1.03216 0.98722 1.94511 1.45603 1.59897 1.38606 1.94490 1.25257 1.77460 1.41352 0.88437 0.94410 0.96593 0.92178 0.75535 0.82359 0.83816 0.83613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.34 9.28 37.16 0.34 -3.00 16 2 C 0.26 5.74 2.37 -69.08 -0.16 5.58 16 3 H 0.05 1.11 6.26 -51.93 -0.33 0.79 16 4 C -0.54 -13.48 8.73 -34.44 -0.30 -13.78 16 5 H 0.06 1.60 7.74 -52.49 -0.41 1.19 16 6 C 0.07 1.79 5.30 -17.82 -0.09 1.69 16 7 N -0.88 -22.67 11.32 55.43 0.63 -22.04 16 8 Si 0.91 19.82 29.54 -169.99 -5.02 14.80 16 9 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 10 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 11 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 12 N -0.68 -13.67 5.02 -53.27 -0.27 -13.94 16 13 C 0.30 5.23 6.59 -83.76 -0.55 4.68 16 14 C -0.18 -2.79 9.24 -39.39 -0.36 -3.15 16 15 C -0.02 -0.22 9.82 -39.58 -0.39 -0.61 16 16 C -0.11 -1.47 6.32 -39.47 -0.25 -1.72 16 17 Cl -0.07 -0.77 28.95 -51.86 -1.50 -2.28 16 18 C 0.00 -0.03 9.44 -39.58 -0.37 -0.41 16 19 C -0.14 -2.33 6.51 -79.76 -0.52 -2.85 16 20 N 0.05 0.84 4.29 34.06 0.15 0.99 16 21 O -0.18 -3.45 16.74 -29.46 -0.49 -3.95 16 22 O -0.17 -3.10 18.95 -29.46 -0.56 -3.66 16 23 H 0.10 2.31 6.07 -51.93 -0.32 1.99 16 24 H 0.04 0.82 8.14 -51.93 -0.42 0.40 16 25 H 0.02 0.30 8.14 -51.93 -0.42 -0.12 16 26 H 0.27 6.59 8.31 -40.82 -0.34 6.25 16 27 H 0.41 8.38 6.13 -40.82 -0.25 8.13 16 28 H 0.16 2.45 6.14 -52.49 -0.32 2.12 16 29 H 0.14 1.40 8.06 -52.48 -0.42 0.98 16 30 H 0.15 1.84 8.01 -52.49 -0.42 1.42 16 LS Contribution 282.73 15.07 4.26 4.26 Total: -1.00 -25.24 282.73 -7.91 -33.15 By element: Atomic # 1 Polarization: 8.66 SS G_CDS: -2.44 Total: 6.22 kcal Atomic # 6 Polarization: -10.91 SS G_CDS: -2.66 Total: -13.57 kcal Atomic # 7 Polarization: -35.49 SS G_CDS: 0.51 Total: -34.99 kcal Atomic # 8 Polarization: -6.55 SS G_CDS: -1.05 Total: -7.61 kcal Atomic # 14 Polarization: 19.82 SS G_CDS: -5.02 Total: 14.80 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.50 Total: -2.28 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -25.24 -7.91 -33.15 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000276263174.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.781 kcal (2) G-P(sol) polarization free energy of solvation -25.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.153 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.628 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds