Wall clock time and date at job start Mon Mar 30 2020 00:50:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86804 * 119.99936 * 2 1 4 4 H 1.48500 * 109.47105 * 180.02562 * 3 2 1 5 5 H 1.48495 * 109.46936 * 300.00219 * 3 2 1 6 6 H 1.48495 * 109.46904 * 60.00152 * 3 2 1 7 7 C 1.37881 * 120.00287 * 180.02562 * 2 1 3 8 8 H 1.08002 * 119.99994 * 179.97438 * 7 2 1 9 9 C 1.50694 * 119.99763 * 359.97438 * 7 2 1 10 10 C 1.53003 * 109.47475 * 180.02562 * 9 7 2 11 11 N 1.46499 * 109.47565 * 179.97438 * 10 9 7 12 12 C 1.39673 * 120.00003 * 179.97438 * 11 10 9 13 13 C 1.38909 * 120.06488 * 354.12899 * 12 11 10 14 14 C 1.38199 * 119.90764 * 179.80765 * 13 12 11 15 15 Cl 1.73597 * 119.97614 * 180.21005 * 14 13 12 16 16 C 1.38429 * 120.05189 * 0.44776 * 14 13 12 17 17 C 1.38240 * 120.13334 * 359.78217 * 16 14 13 18 18 C 1.38140 * 120.09085 * 0.02562 * 17 16 14 19 19 N 1.47996 * 120.02843 * 179.97438 * 18 17 16 20 20 O 1.21799 * 120.00354 * 142.54220 * 19 18 17 21 21 O 1.21801 * 119.99973 * 322.54425 * 19 18 17 22 22 H 0.96992 * 119.99980 * 359.97438 * 1 2 3 23 23 H 1.09005 * 109.47597 * 60.00191 * 9 7 2 24 24 H 1.09007 * 109.47305 * 300.00171 * 9 7 2 25 25 H 1.08994 * 109.47001 * 59.99680 * 10 9 7 26 26 H 1.09011 * 109.46619 * 299.99935 * 10 9 7 27 27 H 0.97000 * 119.99462 * 0.02562 * 11 10 9 28 28 H 1.07993 * 120.04753 * 0.02562 * 13 12 11 29 29 H 1.07997 * 119.93396 * 179.76823 * 16 14 13 30 30 H 1.07998 * 119.96249 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2491 1.6178 0.0000 4 1 3.7091 1.3464 -0.0006 5 1 1.8903 2.3964 -1.2124 6 1 1.8904 2.3964 1.2125 7 6 2.0046 -1.1940 -0.0005 8 1 3.0846 -1.1940 -0.0010 9 6 1.2511 -2.4991 -0.0005 10 6 2.2453 -3.6621 -0.0005 11 7 1.5129 -4.9308 0.0001 12 6 2.2113 -6.1404 -0.0003 13 6 3.5948 -6.1451 -0.1243 14 6 4.2829 -7.3436 -0.1204 15 17 6.0124 -7.3513 -0.2697 16 6 3.5937 -8.5383 -0.0023 17 6 2.2164 -8.5361 0.1164 18 6 1.5232 -7.3413 0.1171 19 7 0.0486 -7.3406 0.2436 20 8 -0.5065 -6.4726 0.8932 21 8 -0.6098 -8.2081 -0.3017 22 1 -0.4850 0.8400 0.0004 23 1 0.6241 -2.5567 -0.8903 24 1 0.6248 -2.5571 0.8897 25 1 2.8720 -3.6043 0.8894 26 1 2.8720 -3.6043 -0.8906 27 1 0.5429 -4.9308 0.0000 28 1 4.1323 -5.2134 -0.2201 29 1 4.1330 -9.4740 -0.0032 30 1 1.6814 -9.4698 0.2079 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000286941324.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:50:19 Heat of formation + Delta-G solvation = 5.440658 kcal Electronic energy + Delta-G solvation = -17701.058339 eV Core-core repulsion = 14525.063075 eV Total energy + Delta-G solvation = -3175.995263 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -42.10105 -39.72755 -37.12144 -36.52970 -35.85772 -33.30094 -31.82241 -30.94171 -28.64712 -26.20109 -25.03463 -22.89172 -22.25567 -20.93872 -19.16828 -18.59103 -17.86678 -17.38293 -16.42347 -15.93276 -15.31117 -14.74178 -14.69486 -14.39323 -14.13573 -13.68221 -13.16472 -12.40509 -12.25591 -12.11497 -11.48560 -11.39854 -11.29310 -11.25369 -11.01874 -10.94242 -10.80926 -10.71784 -10.00056 -9.80081 -9.44548 -9.42144 -8.54842 -7.80940 -6.18693 -4.24072 0.01366 1.02247 1.15544 1.47898 1.73213 3.11830 3.21602 3.25290 3.30743 3.34999 4.21087 4.32281 4.64150 4.74958 4.78362 5.18198 5.20603 5.37739 5.61071 5.77945 5.80400 5.92813 6.05761 6.40623 6.46160 6.93180 7.40639 7.44442 7.52550 7.76122 7.77506 8.12606 8.81232 9.41676 10.92677 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.016932 B = 0.004955 C = 0.003866 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1653.272299 B = 5649.239531 C = 7240.158682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.888 5.888 2 C 0.061 3.939 3 Si 0.898 3.102 4 H -0.272 1.272 5 H -0.283 1.283 6 H -0.282 1.282 7 C -0.527 4.527 8 H 0.060 0.940 9 C 0.012 3.988 10 C 0.112 3.888 11 N -0.703 5.703 12 C 0.298 3.702 13 C -0.192 4.192 14 C 0.058 3.942 15 Cl -0.051 7.051 16 C -0.184 4.184 17 C 0.002 3.998 18 C -0.135 4.135 19 N 0.040 4.960 20 O -0.173 6.173 21 O -0.162 6.162 22 H 0.264 0.736 23 H 0.024 0.976 24 H 0.029 0.971 25 H 0.064 0.936 26 H 0.061 0.939 27 H 0.413 0.587 28 H 0.157 0.843 29 H 0.148 0.852 30 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.647 -16.518 -0.310 18.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.526 5.526 2 C -0.142 4.142 3 Si 0.726 3.274 4 H -0.196 1.196 5 H -0.209 1.209 6 H -0.208 1.208 7 C -0.566 4.566 8 H 0.078 0.922 9 C -0.025 4.025 10 C -0.010 4.010 11 N -0.326 5.326 12 C 0.180 3.820 13 C -0.216 4.216 14 C 0.029 3.971 15 Cl -0.022 7.022 16 C -0.206 4.206 17 C -0.018 4.018 18 C -0.225 4.225 19 N 0.556 4.444 20 O -0.383 6.383 21 O -0.379 6.379 22 H 0.073 0.927 23 H 0.042 0.958 24 H 0.047 0.953 25 H 0.082 0.918 26 H 0.079 0.921 27 H 0.253 0.747 28 H 0.174 0.826 29 H 0.166 0.834 30 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 9.386 -16.086 -0.362 18.628 hybrid contribution -0.216 0.949 0.016 0.973 sum 9.171 -15.137 -0.346 17.702 Atomic orbital electron populations 1.69965 1.06134 1.27037 1.49507 1.25007 0.94892 0.99509 0.94755 0.86438 0.79989 0.83250 0.77766 1.19611 1.20853 1.20804 1.20978 0.93093 0.90116 1.52412 0.92160 1.19323 0.94113 0.90588 0.98516 1.22105 0.96895 0.81374 1.00609 1.46068 1.10508 1.03245 1.72828 1.17411 0.91156 0.85059 0.88347 1.20577 0.90980 0.98895 1.11126 1.20901 0.85375 0.94425 0.96362 1.98403 1.09258 1.98917 1.95578 1.20618 0.92511 0.97548 1.09916 1.20532 0.93637 0.95831 0.91783 1.20471 0.79289 0.95713 1.26980 1.43422 1.03318 0.99633 0.97991 1.94544 1.73422 1.31495 1.38800 1.94507 1.64859 1.31760 1.46745 0.92659 0.95759 0.95316 0.91778 0.92057 0.74672 0.82589 0.83443 0.83185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.89 -25.65 13.29 55.43 0.74 -24.91 16 2 C 0.06 1.67 5.46 -17.82 -0.10 1.57 16 3 Si 0.90 20.67 29.54 -169.99 -5.02 15.65 16 4 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 5 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 6 H -0.28 -6.47 7.11 56.52 0.40 -6.06 16 7 C -0.53 -13.91 9.11 -34.44 -0.31 -14.23 16 8 H 0.06 1.52 7.74 -52.49 -0.41 1.11 16 9 C 0.01 0.29 5.09 -27.88 -0.14 0.15 16 10 C 0.11 2.08 4.90 -4.04 -0.02 2.06 16 11 N -0.70 -12.04 5.51 -58.63 -0.32 -12.37 16 12 C 0.30 4.44 6.60 -83.79 -0.55 3.88 16 13 C -0.19 -2.46 9.10 -39.35 -0.36 -2.82 16 14 C 0.06 0.63 6.32 -39.53 -0.25 0.38 16 15 Cl -0.05 -0.50 28.95 -51.86 -1.50 -2.00 16 16 C -0.18 -1.76 9.83 -39.51 -0.39 -2.15 16 17 C 0.00 0.02 9.66 -39.62 -0.38 -0.36 16 18 C -0.13 -1.92 6.51 -79.75 -0.52 -2.44 16 19 N 0.04 0.66 4.29 34.06 0.15 0.80 16 20 O -0.17 -3.11 16.74 -29.46 -0.49 -3.61 16 21 O -0.16 -2.63 18.95 -29.46 -0.56 -3.19 16 22 H 0.26 7.18 8.31 -40.82 -0.34 6.84 16 23 H 0.02 0.62 8.14 -51.93 -0.42 0.20 16 24 H 0.03 0.74 8.14 -51.92 -0.42 0.32 16 25 H 0.06 1.15 8.13 -51.93 -0.42 0.73 16 26 H 0.06 1.08 7.73 -51.92 -0.40 0.68 16 27 H 0.41 7.52 6.07 -40.82 -0.25 7.27 16 28 H 0.16 1.94 6.73 -52.49 -0.35 1.59 16 29 H 0.15 1.01 8.06 -52.49 -0.42 0.58 16 30 H 0.15 1.31 8.01 -52.49 -0.42 0.89 16 LS Contribution 288.21 15.07 4.34 4.34 Total: -1.00 -28.49 288.21 -8.35 -36.84 By element: Atomic # 1 Polarization: 5.05 SS G_CDS: -2.65 Total: 2.39 kcal Atomic # 6 Polarization: -10.94 SS G_CDS: -3.02 Total: -13.96 kcal Atomic # 7 Polarization: -37.04 SS G_CDS: 0.56 Total: -36.48 kcal Atomic # 8 Polarization: -5.74 SS G_CDS: -1.05 Total: -6.79 kcal Atomic # 14 Polarization: 20.67 SS G_CDS: -5.02 Total: 15.65 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.50 Total: -2.00 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -28.49 -8.35 -36.84 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000286941324.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.279 kcal (2) G-P(sol) polarization free energy of solvation -28.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.441 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds