Wall clock time and date at job start Mon Mar 30 2020 01:05:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09006 * 109.47362 * 2 1 4 4 C 1.50691 * 109.47444 * 119.99868 * 2 1 3 5 5 H 1.08006 * 120.00353 * 119.99657 * 4 2 1 6 6 C 1.37880 * 120.00319 * 299.72971 * 4 2 1 7 7 N 1.31517 * 119.99811 * 0.26693 * 6 4 2 8 8 Si 1.86798 * 120.00453 * 180.27242 * 6 4 2 9 9 H 1.48502 * 109.46917 * 89.99392 * 8 6 4 10 10 H 1.48495 * 109.47487 * 209.99710 * 8 6 4 11 11 H 1.48498 * 109.46828 * 329.99966 * 8 6 4 12 12 N 1.46500 * 109.46945 * 240.00490 * 2 1 3 13 13 C 1.39673 * 120.00526 * 85.00112 * 12 2 1 14 14 C 1.38909 * 120.06312 * 354.20414 * 13 12 2 15 15 C 1.38203 * 119.90687 * 179.97438 * 14 13 12 16 16 Cl 1.73598 * 119.97111 * 179.97438 * 15 14 13 17 17 C 1.38424 * 120.04987 * 359.97438 * 15 14 13 18 18 C 1.38246 * 120.13586 * 0.02562 * 17 15 14 19 19 C 1.38131 * 120.08741 * 359.74742 * 18 17 15 20 20 N 1.48007 * 120.02518 * 180.25607 * 19 18 17 21 21 O 1.21803 * 119.99690 * 6.13007 * 20 19 18 22 22 O 1.21790 * 119.99996 * 186.12966 * 20 19 18 23 23 H 1.09001 * 109.47270 * 300.00174 * 1 2 3 24 24 H 1.09008 * 109.47378 * 59.99839 * 1 2 3 25 25 H 1.08997 * 109.47062 * 180.02562 * 1 2 3 26 26 H 0.96999 * 120.00495 * 180.02562 * 7 6 4 27 27 H 0.97005 * 119.99322 * 264.99203 * 12 2 1 28 28 H 1.07992 * 120.04657 * 359.95429 * 14 13 12 29 29 H 1.08003 * 119.93110 * 180.02562 * 17 15 14 30 30 H 1.07998 * 119.95320 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7103 1.2304 5 1 2.6533 -1.5885 1.1313 6 6 1.7040 -0.2361 2.4827 7 7 0.9479 0.8333 2.6034 8 14 2.3330 -1.1121 4.0079 9 1 3.6425 -0.5354 4.4053 10 1 1.3592 -0.9387 5.1155 11 1 2.4975 -2.5587 3.7153 12 7 2.0183 -0.6905 -1.1962 13 6 2.1517 0.0063 -2.3994 14 6 1.7098 1.3197 -2.4956 15 6 1.8439 2.0063 -3.6875 16 17 1.2916 3.6475 -3.8098 17 6 2.4183 1.3862 -4.7838 18 6 2.8587 0.0792 -4.6901 19 6 2.7317 -0.6108 -3.5003 20 7 3.2089 -2.0083 -3.3999 21 8 3.8135 -2.5135 -4.3288 22 8 2.9971 -2.6529 -2.3886 23 1 -0.3634 0.5139 0.8900 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 0.7171 1.1672 3.4844 27 1 2.2490 -1.6317 -1.1526 28 1 1.2618 1.8035 -1.6403 29 1 2.5225 1.9247 -5.7142 30 1 3.3068 -0.4016 -5.5472 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000288099953.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:21 Heat of formation + Delta-G solvation = 14.752400 kcal Electronic energy + Delta-G solvation = -18330.244410 eV Core-core repulsion = 15154.652934 eV Total energy + Delta-G solvation = -3175.591476 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.87638 -39.43667 -36.94487 -36.40913 -35.68408 -33.07360 -31.51826 -30.30261 -28.17096 -25.91770 -25.38628 -22.97397 -22.26947 -20.48567 -18.90218 -18.36232 -17.63843 -17.18179 -16.56420 -15.66043 -15.10938 -14.68467 -14.32069 -13.90729 -13.71560 -12.92996 -12.70694 -12.56333 -11.87120 -11.76798 -11.29575 -11.23929 -11.15087 -11.09447 -10.87865 -10.85887 -10.74832 -10.43297 -10.29797 -9.91729 -9.32593 -9.15240 -8.68336 -7.35971 -6.33048 -4.42097 0.17778 1.38322 1.57593 1.75355 2.01434 3.16881 3.23971 3.27906 3.46150 3.79681 4.24856 4.52013 4.92173 5.00854 5.06748 5.09958 5.54736 5.75401 5.91548 6.09096 6.30139 6.40582 6.61910 6.69649 6.78459 6.99939 7.46333 7.51644 7.76529 7.87780 7.99748 8.33701 8.64622 9.26053 10.73279 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.016484 B = 0.006645 C = 0.004940 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1698.233811 B = 4212.814465 C = 5667.036743 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.252 3.748 3 H 0.047 0.953 4 C -0.536 4.536 5 H 0.067 0.933 6 C 0.070 3.930 7 N -0.885 5.885 8 Si 0.906 3.094 9 H -0.278 1.278 10 H -0.283 1.283 11 H -0.270 1.270 12 N -0.669 5.669 13 C 0.306 3.694 14 C -0.193 4.193 15 C 0.060 3.940 16 Cl -0.056 7.056 17 C -0.197 4.197 18 C 0.006 3.994 19 C -0.153 4.153 20 N 0.060 4.940 21 O -0.183 6.183 22 O -0.202 6.202 23 H 0.098 0.902 24 H 0.016 0.984 25 H 0.036 0.964 26 H 0.267 0.733 27 H 0.417 0.583 28 H 0.159 0.841 29 H 0.144 0.856 30 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.514 3.539 -11.839 12.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C 0.150 3.850 3 H 0.065 0.935 4 C -0.574 4.574 5 H 0.085 0.915 6 C -0.134 4.134 7 N -0.523 5.523 8 Si 0.733 3.267 9 H -0.204 1.204 10 H -0.209 1.209 11 H -0.195 1.195 12 N -0.297 5.297 13 C 0.182 3.818 14 C -0.217 4.217 15 C 0.032 3.968 16 Cl -0.027 7.027 17 C -0.219 4.219 18 C -0.014 4.014 19 C -0.246 4.246 20 N 0.565 4.435 21 O -0.394 6.394 22 O -0.401 6.401 23 H 0.116 0.884 24 H 0.035 0.965 25 H 0.055 0.945 26 H 0.077 0.923 27 H 0.265 0.735 28 H 0.177 0.823 29 H 0.162 0.838 30 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.087 4.351 -11.385 12.189 hybrid contribution 0.414 -0.890 0.898 1.330 sum 0.501 3.461 -10.488 11.055 Atomic orbital electron populations 1.22229 0.97581 1.00392 1.01197 1.19152 0.91641 0.93764 0.80446 0.93510 1.21132 1.32985 1.13649 0.89663 0.91476 1.24861 0.94484 0.94892 0.99175 1.69849 1.35669 1.22366 1.24381 0.86353 0.78650 0.80128 0.81575 1.20386 1.20895 1.19509 1.47257 1.60825 1.15058 1.06549 1.17610 0.87478 0.91001 0.85740 1.20747 1.08879 0.93029 0.99019 1.20931 0.95152 0.86095 0.94664 1.98387 1.87738 1.18357 1.98237 1.20539 1.07582 0.94660 0.99140 1.20540 0.92912 0.92906 0.95059 1.20463 1.21055 0.84225 0.98846 1.43343 0.97975 1.02635 0.99560 1.94458 1.40442 1.73065 1.31449 1.94228 1.63071 1.62036 1.20718 0.88384 0.96525 0.94506 0.92286 0.73469 0.82313 0.83804 0.83063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.42 9.10 37.16 0.34 -3.08 16 2 C 0.25 5.76 2.23 -69.09 -0.15 5.61 16 3 H 0.05 1.13 6.76 -51.93 -0.35 0.78 16 4 C -0.54 -13.69 8.73 -34.44 -0.30 -13.99 16 5 H 0.07 1.73 7.74 -52.48 -0.41 1.32 16 6 C 0.07 1.78 5.31 -17.82 -0.09 1.68 16 7 N -0.89 -23.12 11.33 55.43 0.63 -22.49 16 8 Si 0.91 20.14 29.54 -169.99 -5.02 15.12 16 9 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 10 H -0.28 -6.24 7.11 56.52 0.40 -5.83 16 11 H -0.27 -6.01 7.11 56.52 0.40 -5.61 16 12 N -0.67 -13.79 5.12 -53.30 -0.27 -14.06 16 13 C 0.31 5.53 6.62 -83.79 -0.55 4.98 16 14 C -0.19 -3.15 8.48 -39.35 -0.33 -3.49 16 15 C 0.06 0.83 6.32 -39.53 -0.25 0.58 16 16 Cl -0.06 -0.69 28.95 -51.86 -1.50 -2.19 16 17 C -0.20 -2.36 9.83 -39.51 -0.39 -2.75 16 18 C 0.01 0.07 9.55 -39.62 -0.38 -0.31 16 19 C -0.15 -2.57 6.86 -79.75 -0.55 -3.11 16 20 N 0.06 1.11 4.45 34.06 0.15 1.26 16 21 O -0.18 -3.27 18.46 -29.46 -0.54 -3.81 16 22 O -0.20 -4.05 15.71 -29.46 -0.46 -4.51 16 23 H 0.10 2.35 6.08 -51.93 -0.32 2.04 16 24 H 0.02 0.31 7.20 -51.92 -0.37 -0.06 16 25 H 0.04 0.80 8.14 -51.93 -0.42 0.38 16 26 H 0.27 6.66 8.31 -40.82 -0.34 6.32 16 27 H 0.42 8.81 4.98 -41.19 -0.21 8.61 16 28 H 0.16 2.73 5.85 -52.49 -0.31 2.42 16 29 H 0.14 1.30 8.06 -52.48 -0.42 0.87 16 30 H 0.15 1.65 7.62 -52.49 -0.40 1.25 16 LS Contribution 278.63 15.07 4.20 4.20 Total: -1.00 -25.83 278.63 -7.82 -33.65 By element: Atomic # 1 Polarization: 9.05 SS G_CDS: -2.34 Total: 6.71 kcal Atomic # 6 Polarization: -11.22 SS G_CDS: -2.66 Total: -13.88 kcal Atomic # 7 Polarization: -35.79 SS G_CDS: 0.51 Total: -35.29 kcal Atomic # 8 Polarization: -7.32 SS G_CDS: -1.01 Total: -8.32 kcal Atomic # 14 Polarization: 20.14 SS G_CDS: -5.02 Total: 15.12 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.50 Total: -2.19 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -25.83 -7.82 -33.65 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000288099953.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.404 kcal (2) G-P(sol) polarization free energy of solvation -25.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.577 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.825 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.652 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds