Wall clock time and date at job start Mon Mar 30 2020 01:14:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86801 * 120.00156 * 2 1 4 4 H 1.48496 * 109.47347 * 270.00004 * 3 2 1 5 5 H 1.48501 * 109.47264 * 30.00359 * 3 2 1 6 6 H 1.48504 * 109.47038 * 149.99745 * 3 2 1 7 7 C 1.37880 * 119.99661 * 180.02562 * 2 1 3 8 8 H 1.08001 * 119.99872 * 179.97438 * 7 2 1 9 9 C 1.50697 * 119.99958 * 0.02562 * 7 2 1 10 10 C 1.52994 * 109.46846 * 180.02562 * 9 7 2 11 11 C 1.50707 * 109.47221 * 180.02562 * 10 9 7 12 12 O 1.21284 * 119.99523 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00096 * 179.97438 * 11 10 9 14 14 N 1.40106 * 119.99739 * 179.97438 * 13 11 10 15 15 C 1.39057 * 119.99786 * 180.02562 * 14 13 11 16 16 N 1.32623 * 120.09809 * 0.02562 * 15 14 13 17 17 C 1.32263 * 119.92278 * 179.97438 * 16 15 14 18 18 C 1.38145 * 120.13925 * 359.97438 * 17 16 15 19 19 N 1.32287 * 120.20106 * 0.02562 * 18 17 16 20 20 C 1.32019 * 120.07223 * 0.02562 * 19 18 17 21 21 Cl 1.73609 * 120.06929 * 179.97438 * 20 19 18 22 22 H 0.97009 * 119.99750 * 0.02562 * 1 2 3 23 23 H 1.09003 * 109.47057 * 60.00336 * 9 7 2 24 24 H 1.08995 * 109.47085 * 299.99778 * 9 7 2 25 25 H 1.09000 * 109.47651 * 59.99849 * 10 9 7 26 26 H 1.09008 * 109.47336 * 299.99617 * 10 9 7 27 27 H 0.96996 * 120.00241 * 0.02562 * 13 11 10 28 28 H 0.96996 * 120.00020 * 0.02562 * 14 13 11 29 29 H 1.07995 * 119.93435 * 179.97438 * 17 16 15 30 30 H 1.07991 * 119.90000 * 179.72219 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 2.4967 2.0464 -1.4000 5 1 1.4467 2.6527 0.7001 6 1 3.5467 1.4401 0.7001 7 6 2.0045 -1.1941 -0.0005 8 1 3.0845 -1.1942 -0.0010 9 6 1.2509 -2.4991 -0.0017 10 6 2.2451 -3.6620 -0.0015 11 6 1.4915 -4.9672 -0.0033 12 8 0.2787 -4.9671 -0.0051 13 7 2.1654 -6.1344 -0.0039 14 7 1.4648 -7.3477 -0.0050 15 6 2.1600 -8.5520 -0.0051 16 7 3.4863 -8.5543 -0.0037 17 6 4.1440 -9.7018 -0.0033 18 6 3.4525 -10.8977 -0.0038 19 7 2.1297 -10.9014 -0.0053 20 6 1.4649 -9.7609 -0.0067 21 17 -0.2712 -9.7659 -0.0093 22 1 -0.4850 0.8401 -0.0004 23 1 0.6246 -2.5563 -0.8920 24 1 0.6240 -2.5574 0.8880 25 1 2.8711 -3.6048 0.8890 26 1 2.8724 -3.6040 -0.8910 27 1 3.1354 -6.1344 -0.0028 28 1 0.4948 -7.3476 -0.0057 29 1 5.2240 -9.7039 -0.0025 30 1 3.9935 -11.8323 -0.0081 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291741607.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:14:39 Heat of formation + Delta-G solvation = 36.469760 kcal Electronic energy + Delta-G solvation = -17249.995252 eV Core-core repulsion = 14107.638263 eV Total energy + Delta-G solvation = -3142.356990 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.062 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.42157 -39.48217 -37.08326 -36.50437 -34.20125 -33.57800 -32.49649 -31.06680 -29.14590 -25.89125 -24.90329 -23.88709 -21.98140 -20.40492 -18.62192 -18.33187 -17.46423 -16.91980 -16.37593 -15.85941 -15.57142 -15.06542 -14.92518 -14.48468 -13.67446 -13.55541 -13.11625 -12.52682 -12.26858 -12.11300 -12.00592 -11.68154 -11.28390 -11.06568 -10.96942 -10.66072 -10.07885 -9.86044 -9.69950 -9.63831 -9.41941 -9.17101 -8.38635 -7.75442 -6.02245 -4.07267 0.40534 0.79398 1.43019 1.73304 2.92634 3.29927 3.30385 3.36488 3.38453 3.40668 3.87800 4.13458 4.41783 4.60234 4.74851 4.89484 5.26279 5.33173 5.78695 6.04930 6.05180 6.27264 6.71016 6.80935 7.07387 7.40502 7.62903 7.66747 7.74496 7.98227 8.28675 8.51741 9.00314 9.56822 11.08607 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.039274 B = 0.003351 C = 0.003094 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 712.762193 B = 8354.565425 C = 9046.880551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.889 5.889 2 C 0.059 3.941 3 Si 0.895 3.105 4 H -0.280 1.280 5 H -0.286 1.286 6 H -0.273 1.273 7 C -0.529 4.529 8 H 0.058 0.942 9 C 0.037 3.963 10 C -0.116 4.116 11 C 0.510 3.490 12 O -0.530 6.530 13 N -0.530 5.530 14 N -0.497 5.497 15 C 0.382 3.618 16 N -0.495 5.495 17 C 0.120 3.880 18 C -0.013 4.013 19 N -0.386 5.386 20 C 0.060 3.940 21 Cl -0.016 7.016 22 H 0.262 0.738 23 H 0.026 0.974 24 H 0.026 0.974 25 H 0.088 0.912 26 H 0.088 0.912 27 H 0.430 0.570 28 H 0.446 0.554 29 H 0.180 0.820 30 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.481 -21.485 -0.009 23.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.527 5.527 2 C -0.143 4.143 3 Si 0.722 3.278 4 H -0.206 1.206 5 H -0.212 1.212 6 H -0.198 1.198 7 C -0.568 4.568 8 H 0.076 0.924 9 C -0.001 4.001 10 C -0.158 4.158 11 C 0.299 3.701 12 O -0.403 6.403 13 N -0.281 5.281 14 N -0.222 5.222 15 C 0.139 3.861 16 N -0.220 5.220 17 C -0.042 4.042 18 C -0.175 4.175 19 N -0.102 5.102 20 C -0.118 4.118 21 Cl 0.011 6.989 22 H 0.071 0.929 23 H 0.044 0.956 24 H 0.044 0.956 25 H 0.106 0.894 26 H 0.106 0.894 27 H 0.272 0.728 28 H 0.293 0.707 29 H 0.197 0.803 30 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 7.303 -21.099 -0.005 22.327 hybrid contribution 0.407 0.735 -0.011 0.840 sum 7.710 -20.365 -0.015 21.775 Atomic orbital electron populations 1.69995 1.06086 1.26734 1.49888 1.25024 0.94844 0.99311 0.95160 0.86560 0.79760 0.83337 0.78109 1.20630 1.21208 1.19819 1.21172 0.93005 0.90761 1.51825 0.92402 1.18949 0.93112 0.89064 0.98934 1.21909 1.00905 0.89598 1.03373 1.22205 0.89234 0.83879 0.74752 1.90711 1.14166 1.86801 1.48634 1.45618 1.08814 0.95223 1.78456 1.43486 1.07390 0.94431 1.76904 1.18685 0.89626 0.84811 0.92957 1.68044 1.04483 1.30651 1.18801 1.23619 1.01800 0.87317 0.91430 1.23321 0.88704 1.00117 1.05347 1.67606 1.09635 1.26822 1.06114 1.21665 0.88776 0.89074 1.12313 1.98424 1.05454 1.98154 1.96826 0.92856 0.95570 0.95564 0.89386 0.89398 0.72798 0.70717 0.80285 0.80675 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.89 -26.82 13.29 55.43 0.74 -26.09 16 2 C 0.06 1.66 5.46 -17.82 -0.10 1.57 16 3 Si 0.89 21.20 29.54 -169.99 -5.02 16.18 16 4 H -0.28 -6.55 7.11 56.52 0.40 -6.14 16 5 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 6 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 7 C -0.53 -14.51 9.11 -34.44 -0.31 -14.82 16 8 H 0.06 1.49 7.74 -52.49 -0.41 1.08 16 9 C 0.04 0.96 4.26 -27.89 -0.12 0.84 16 10 C -0.12 -2.20 5.64 -27.88 -0.16 -2.36 16 11 C 0.51 9.34 7.95 -10.98 -0.09 9.25 16 12 O -0.53 -11.79 15.82 5.55 0.09 -11.71 16 13 N -0.53 -7.68 6.29 31.22 0.20 -7.49 16 14 N -0.50 -6.91 6.38 31.24 0.20 -6.72 16 15 C 0.38 4.74 7.60 -154.66 -1.18 3.56 16 16 N -0.49 -5.38 9.54 -12.21 -0.12 -5.50 16 17 C 0.12 0.90 11.21 -17.40 -0.20 0.70 16 18 C -0.01 -0.10 11.21 -17.39 -0.19 -0.30 16 19 N -0.39 -4.25 10.48 -10.01 -0.10 -4.35 16 20 C 0.06 0.71 7.31 -17.02 -0.12 0.59 16 21 Cl -0.02 -0.19 27.78 -51.86 -1.44 -1.63 16 22 H 0.26 7.43 8.31 -40.82 -0.34 7.09 16 23 H 0.03 0.74 8.10 -51.93 -0.42 0.31 16 24 H 0.03 0.74 8.10 -51.93 -0.42 0.32 16 25 H 0.09 1.49 8.14 -51.93 -0.42 1.06 16 26 H 0.09 1.48 8.14 -51.92 -0.42 1.06 16 27 H 0.43 5.22 7.97 -182.60 -1.46 3.76 16 28 H 0.45 6.43 6.68 -182.60 -1.22 5.21 16 29 H 0.18 0.60 8.06 -52.49 -0.42 0.18 16 30 H 0.18 0.70 8.06 -52.49 -0.42 0.27 16 LS Contribution 289.49 15.07 4.36 4.36 Total: -1.00 -33.61 289.49 -8.31 -41.92 By element: Atomic # 1 Polarization: 6.72 SS G_CDS: -4.75 Total: 1.97 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -2.46 Total: -0.97 kcal Atomic # 7 Polarization: -51.05 SS G_CDS: 0.91 Total: -50.14 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: 0.09 Total: -11.71 kcal Atomic # 14 Polarization: 21.20 SS G_CDS: -5.02 Total: 16.18 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -1.44 Total: -1.63 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -33.61 -8.31 -41.92 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291741607.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.391 kcal (2) G-P(sol) polarization free energy of solvation -33.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.314 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.921 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.470 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds