Wall clock time and date at job start Mon Mar 30 2020 00:48:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34754 * 116.99954 * 2 1 4 4 O 1.21507 * 119.99631 * 0.02562 * 3 2 1 5 5 C 1.47470 * 119.99914 * 180.02562 * 3 2 1 6 6 C 1.39801 * 120.08631 * 180.02562 * 5 3 2 7 7 C 1.37678 * 119.92451 * 180.27519 * 6 5 3 8 8 C 1.38991 * 120.11030 * 359.49219 * 7 6 5 9 9 O 1.35722 * 119.91228 * 180.25630 * 8 7 6 10 10 C 1.42897 * 117.00228 * 0.24974 * 9 8 7 11 11 C 1.50694 * 109.47334 * 180.02562 * 10 9 8 12 12 H 1.08004 * 120.00250 * 0.02562 * 11 10 9 13 13 C 1.37882 * 120.00300 * 180.02562 * 11 10 9 14 14 N 1.31520 * 119.99549 * 359.97438 * 13 11 10 15 15 Si 1.86793 * 120.00153 * 179.97438 * 13 11 10 16 16 H 1.48498 * 109.47219 * 59.99935 * 15 13 11 17 17 H 1.48502 * 109.47162 * 179.97438 * 15 13 11 18 18 H 1.48494 * 109.47389 * 299.99667 * 15 13 11 19 19 C 1.39096 * 120.17520 * 0.50364 * 8 7 6 20 20 Cl 1.73602 * 119.96073 * 179.73095 * 19 8 7 21 21 C 1.37788 * 120.07046 * 359.75172 * 19 8 7 22 22 H 1.09005 * 109.46694 * 299.99684 * 1 2 3 23 23 H 1.08999 * 109.47036 * 59.99467 * 1 2 3 24 24 H 1.08996 * 109.47155 * 179.97438 * 1 2 3 25 25 H 1.08002 * 120.03464 * 359.97438 * 6 5 3 26 26 H 1.08005 * 119.94896 * 179.73974 * 7 6 5 27 27 H 1.09006 * 109.47025 * 299.99949 * 10 9 8 28 28 H 1.08999 * 109.46914 * 59.99758 * 10 9 8 29 29 H 0.96998 * 119.99762 * 180.02562 * 14 13 11 30 30 H 1.08008 * 120.04866 * 180.02562 * 21 19 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0638 1.2007 0.0000 4 8 1.4019 2.2197 0.0005 5 6 3.5365 1.2778 -0.0006 6 6 4.1730 2.5225 0.0000 7 6 5.5481 2.5907 -0.0063 8 6 6.3041 1.4244 -0.0025 9 8 7.6594 1.4963 -0.0034 10 6 8.2398 2.8020 -0.0029 11 6 9.7421 2.6840 -0.0047 12 1 10.2073 1.7093 -0.0066 13 6 10.5230 3.8204 -0.0040 14 7 9.9566 5.0074 -0.0022 15 14 12.3852 3.6741 -0.0055 16 1 12.8229 2.9388 -1.2192 17 1 12.9884 5.0311 -0.0050 18 1 12.8248 2.9362 1.2058 19 6 5.6753 0.1836 -0.0029 20 17 6.6250 -1.2696 -0.0052 21 6 4.2996 0.1068 -0.0020 22 1 -0.3633 0.5138 0.8901 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 3.5867 3.4295 0.0004 26 1 6.0403 3.5521 -0.0101 27 1 7.9172 3.3435 -0.8922 28 1 7.9185 3.3421 0.8877 29 1 10.5059 5.8069 -0.0021 30 1 3.8117 -0.8568 -0.0019 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299138874.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:48:16 Heat of formation + Delta-G solvation = -112.116567 kcal Electronic energy + Delta-G solvation = -17499.753473 eV Core-core repulsion = 14286.367795 eV Total energy + Delta-G solvation = -3213.385678 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.57126 -39.49915 -37.08938 -36.43891 -35.98599 -33.05267 -30.88599 -30.49398 -28.03913 -27.42195 -24.05299 -23.32219 -21.88042 -20.77641 -18.28398 -17.47891 -17.01293 -16.55553 -16.39746 -15.48208 -15.05043 -14.96023 -14.63633 -14.02197 -13.82306 -13.51571 -13.13935 -12.72008 -12.48308 -12.24936 -11.96930 -11.28774 -11.12563 -11.08590 -11.05194 -10.90969 -10.79549 -10.45767 -10.40552 -10.27019 -9.45570 -8.84733 -8.70192 -7.88436 -6.34494 -4.39041 0.83911 1.27946 2.37936 2.57695 2.66453 3.21630 3.24922 3.27565 3.78195 3.83462 4.30515 4.71215 4.93842 4.98456 5.02416 5.03258 5.09051 5.22644 5.35004 5.52323 5.80277 5.97295 6.19779 6.23560 6.43016 6.62372 6.71792 6.94413 7.54072 7.72015 7.79281 8.13886 8.70580 9.26622 10.76524 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.030723 B = 0.004243 C = 0.003738 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 911.142623 B = 6597.307352 C = 7488.002927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.357 6.357 3 C 0.519 3.481 4 O -0.515 6.515 5 C -0.186 4.186 6 C -0.004 4.004 7 C -0.217 4.217 8 C 0.204 3.796 9 O -0.291 6.291 10 C 0.187 3.813 11 C -0.528 4.528 12 H 0.073 0.927 13 C 0.063 3.937 14 N -0.893 5.893 15 Si 0.915 3.085 16 H -0.272 1.272 17 H -0.284 1.284 18 H -0.272 1.272 19 C -0.102 4.102 20 Cl -0.055 7.055 21 C -0.014 4.014 22 H 0.062 0.938 23 H 0.062 0.938 24 H 0.100 0.900 25 H 0.141 0.859 26 H 0.154 0.846 27 H 0.028 0.972 28 H 0.029 0.971 29 H 0.269 0.731 30 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.199 -8.801 0.002 16.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.274 6.274 3 C 0.366 3.634 4 O -0.405 6.405 5 C -0.188 4.188 6 C -0.022 4.022 7 C -0.236 4.236 8 C 0.152 3.848 9 O -0.201 6.201 10 C 0.115 3.885 11 C -0.565 4.565 12 H 0.091 0.909 13 C -0.140 4.140 14 N -0.531 5.531 15 Si 0.742 3.258 16 H -0.198 1.198 17 H -0.209 1.209 18 H -0.198 1.198 19 C -0.129 4.129 20 Cl -0.027 7.027 21 C -0.033 4.033 22 H 0.081 0.919 23 H 0.081 0.919 24 H 0.119 0.881 25 H 0.159 0.841 26 H 0.171 0.829 27 H 0.046 0.954 28 H 0.046 0.954 29 H 0.079 0.921 30 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -14.110 -8.584 0.001 16.516 hybrid contribution 0.741 0.275 0.001 0.790 sum -13.369 -8.309 0.003 15.740 Atomic orbital electron populations 1.23244 0.76273 1.03561 1.02545 1.86557 1.23329 1.32913 1.84619 1.21010 0.88864 0.81244 0.72290 1.90823 1.66751 1.35981 1.46906 1.18649 0.88659 0.94272 1.17250 1.21086 0.93791 0.96641 0.90678 1.21417 0.93815 0.98855 1.09511 1.19348 0.85820 0.91908 0.87704 1.86226 1.13485 1.37156 1.83257 1.20885 0.94109 0.76005 0.97472 1.20890 0.88692 0.94051 1.52898 0.90918 1.24926 1.00055 0.94599 0.94443 1.69927 1.36455 0.97651 1.49069 0.86267 0.83119 0.77348 0.79098 1.19768 1.20943 1.19763 1.20033 0.91299 0.86563 1.15035 1.98353 1.72387 1.34647 1.97277 1.21019 0.90576 0.98785 0.92938 0.91915 0.91922 0.88124 0.84110 0.82872 0.95379 0.95372 0.92107 0.83504 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.32 10.57 101.05 1.07 1.38 16 2 O -0.36 -4.28 9.81 -40.64 -0.40 -4.67 16 3 C 0.52 7.39 7.89 34.49 0.27 7.66 16 4 O -0.51 -8.30 16.13 -19.27 -0.31 -8.61 16 5 C -0.19 -2.73 5.87 -104.98 -0.62 -3.35 16 6 C 0.00 -0.05 9.58 -39.20 -0.38 -0.43 16 7 C -0.22 -3.72 9.01 -39.51 -0.36 -4.07 16 8 C 0.20 3.85 6.69 -38.98 -0.26 3.59 16 9 O -0.29 -6.54 9.56 -18.87 -0.18 -6.72 16 10 C 0.19 4.64 4.49 36.00 0.16 4.80 16 11 C -0.53 -14.39 9.43 -34.44 -0.32 -14.71 16 12 H 0.07 1.97 7.81 -52.48 -0.41 1.56 16 13 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 14 N -0.89 -24.87 13.29 55.43 0.74 -24.13 16 15 Si 0.92 20.68 29.54 -169.99 -5.02 15.66 16 16 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 17 H -0.28 -6.30 7.11 56.52 0.40 -5.89 16 18 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 19 C -0.10 -1.69 6.32 -39.43 -0.25 -1.94 16 20 Cl -0.06 -0.89 28.49 -51.86 -1.48 -2.37 16 21 C -0.01 -0.20 9.38 -39.17 -0.37 -0.57 16 22 H 0.06 0.52 8.14 -51.93 -0.42 0.09 16 23 H 0.06 0.52 8.14 -51.93 -0.42 0.09 16 24 H 0.10 0.54 8.14 -51.93 -0.42 0.12 16 25 H 0.14 1.94 7.64 -52.49 -0.40 1.54 16 26 H 0.15 2.68 6.28 -52.48 -0.33 2.35 16 27 H 0.03 0.71 7.64 -51.93 -0.40 0.32 16 28 H 0.03 0.72 7.66 -51.93 -0.40 0.32 16 29 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 30 H 0.15 1.74 7.60 -52.48 -0.40 1.34 16 LS Contribution 290.20 15.07 4.37 4.37 Total: -1.00 -29.11 290.20 -6.16 -35.28 By element: Atomic # 1 Polarization: -0.03 SS G_CDS: -2.74 Total: -2.77 kcal Atomic # 6 Polarization: -4.90 SS G_CDS: -1.15 Total: -6.05 kcal Atomic # 7 Polarization: -24.87 SS G_CDS: 0.74 Total: -24.13 kcal Atomic # 8 Polarization: -19.11 SS G_CDS: -0.89 Total: -20.00 kcal Atomic # 14 Polarization: 20.68 SS G_CDS: -5.02 Total: 15.66 kcal Atomic # 17 Polarization: -0.89 SS G_CDS: -1.48 Total: -2.37 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -29.11 -6.16 -35.28 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299138874.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.839 kcal (2) G-P(sol) polarization free energy of solvation -29.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds