Wall clock time and date at job start Mon Mar 30 2020 00:59:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38151 * 120.03433 * 2 1 4 4 C 1.38253 * 120.09750 * 179.79011 * 3 2 1 5 5 N 1.48004 * 119.92398 * 180.22949 * 4 3 2 6 6 O 1.21803 * 119.99725 * 180.23136 * 5 4 3 7 7 O 1.21798 * 119.99950 * 0.23424 * 5 4 3 8 8 C 1.38319 * 120.15174 * 0.46333 * 4 3 2 9 9 C 1.38169 * 120.06020 * 359.78932 * 8 4 3 10 10 Cl 1.73602 * 120.04512 * 180.02562 * 9 8 4 11 11 C 1.38838 * 120.02665 * 180.27068 * 2 1 3 12 12 N 1.39746 * 120.08198 * 0.02562 * 11 2 1 13 13 C 1.46905 * 110.99714 * 266.06362 * 12 11 2 14 14 C 1.50706 * 109.47185 * 175.29353 * 13 12 11 15 15 H 1.08001 * 119.99695 * 0.02562 * 14 13 12 16 16 C 1.37875 * 119.99853 * 179.97438 * 14 13 12 17 17 N 1.31510 * 119.99988 * 359.97438 * 16 14 13 18 18 Si 1.86799 * 119.99563 * 180.02562 * 16 14 13 19 19 H 1.48500 * 109.47619 * 0.02562 * 18 16 14 20 20 H 1.48501 * 109.47373 * 120.00197 * 18 16 14 21 21 H 1.48501 * 109.47146 * 239.99553 * 18 16 14 22 22 H 1.09005 * 109.47167 * 269.72585 * 1 2 3 23 23 H 1.09000 * 109.47428 * 149.72560 * 1 2 3 24 24 H 1.09001 * 109.46919 * 29.72469 * 1 2 3 25 25 H 1.08001 * 119.95288 * 0.02562 * 3 2 1 26 26 H 1.08002 * 119.96728 * 179.76761 * 8 4 3 27 27 H 1.00900 * 111.00613 * 142.10812 * 12 11 2 28 28 H 1.08996 * 109.46877 * 295.29075 * 13 12 11 29 29 H 1.08996 * 109.47082 * 55.29435 * 13 12 11 30 30 H 0.97008 * 119.99624 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1985 1.1960 0.0000 4 6 3.5810 1.1975 0.0044 5 7 4.3179 2.4811 0.0095 6 8 5.5359 2.4840 0.0091 7 8 3.7063 3.5344 0.0142 8 6 4.2771 0.0023 -0.0009 9 6 3.5921 -1.1976 -0.0062 10 17 4.4661 -2.6975 -0.0121 11 6 2.2018 -1.2020 -0.0057 12 7 1.5053 -2.4136 -0.0119 13 6 1.3241 -2.9236 1.3537 14 6 0.4724 -4.1664 1.3170 15 1 0.1031 -4.5402 0.3734 16 6 0.1656 -4.8268 2.4878 17 7 0.6166 -4.3724 3.6365 18 14 -0.8894 -6.3676 2.4420 19 1 -1.2653 -6.6687 1.0373 20 1 -0.1236 -7.5089 3.0044 21 1 -2.1176 -6.1507 3.2480 22 1 -0.3634 -0.0049 1.0277 23 1 -0.3634 -0.8875 -0.5181 24 1 -0.3633 0.8925 -0.5096 25 1 1.6583 2.1312 0.0004 26 1 5.3571 0.0070 -0.0012 27 1 1.9698 -3.0947 -0.5937 28 1 2.2965 -3.1622 1.7845 29 1 0.8332 -2.1647 1.9629 30 1 0.4004 -4.8369 4.4603 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309703611.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:03 Heat of formation + Delta-G solvation = 8.503798 kcal Electronic energy + Delta-G solvation = -17952.449301 eV Core-core repulsion = 14776.586865 eV Total energy + Delta-G solvation = -3175.862436 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -42.13067 -39.95608 -36.67435 -36.49784 -35.71299 -33.03582 -32.54853 -30.40927 -27.45846 -27.07945 -25.14490 -22.74660 -22.26536 -21.24006 -18.90330 -18.65269 -17.49874 -17.30387 -16.32156 -15.93310 -15.20597 -15.00506 -14.23857 -13.81015 -13.40937 -13.11738 -12.87877 -12.54247 -12.08101 -11.77206 -11.70279 -11.55184 -11.52940 -11.23935 -11.11373 -11.02564 -10.98828 -10.85831 -10.28356 -9.67148 -9.11670 -9.01626 -8.70512 -7.98418 -6.25317 -4.29694 -0.12207 0.79732 1.35428 1.37453 2.02921 3.13638 3.18498 3.26906 3.30654 4.19848 4.34717 4.40336 4.55689 4.75406 4.95576 5.11798 5.31730 5.44782 5.51615 5.71964 5.86640 5.91920 6.21898 6.38381 6.51660 6.84209 6.94537 7.43397 7.69554 7.74646 7.80678 8.14345 8.76646 9.36296 10.85248 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.027854 B = 0.005013 C = 0.004565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1004.993038 B = 5584.165764 C = 6132.637833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.068 4.068 3 C -0.044 4.044 4 C -0.060 4.060 5 N 0.038 4.962 6 O -0.170 6.170 7 O -0.166 6.166 8 C -0.042 4.042 9 C -0.088 4.088 10 Cl -0.035 7.035 11 C 0.191 3.809 12 N -0.644 5.644 13 C 0.202 3.798 14 C -0.521 4.521 15 H 0.067 0.933 16 C 0.061 3.939 17 N -0.893 5.893 18 Si 0.902 3.098 19 H -0.271 1.271 20 H -0.283 1.283 21 H -0.282 1.282 22 H 0.079 0.921 23 H 0.094 0.906 24 H 0.064 0.936 25 H 0.156 0.844 26 H 0.156 0.844 27 H 0.353 0.647 28 H 0.008 0.992 29 H 0.035 0.965 30 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.708 7.620 -7.423 11.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.071 4.071 3 C -0.064 4.064 4 C -0.144 4.144 5 N 0.556 4.444 6 O -0.384 6.384 7 O -0.381 6.381 8 C -0.062 4.062 9 C -0.118 4.118 10 Cl -0.006 7.006 11 C 0.089 3.911 12 N -0.272 5.272 13 C 0.080 3.920 14 C -0.560 4.560 15 H 0.085 0.915 16 C -0.142 4.142 17 N -0.531 5.531 18 Si 0.730 3.270 19 H -0.195 1.195 20 H -0.209 1.209 21 H -0.208 1.208 22 H 0.097 0.903 23 H 0.113 0.887 24 H 0.083 0.917 25 H 0.174 0.826 26 H 0.174 0.826 27 H 0.175 0.825 28 H 0.026 0.974 29 H 0.053 0.947 30 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 2.781 7.044 -7.227 10.469 hybrid contribution 0.780 -0.934 0.330 1.261 sum 3.561 6.111 -6.897 9.879 Atomic orbital electron populations 1.20725 0.88025 1.03737 1.03626 1.19737 0.97968 0.89260 1.00086 1.20898 0.90665 1.00177 0.94680 1.20697 0.92268 0.83033 1.18384 1.43487 1.01108 1.02718 0.97104 1.94524 0.95661 1.94260 1.53966 1.94514 1.69882 1.19932 1.53806 1.20604 1.01799 0.88572 0.95259 1.21583 0.93027 0.88151 1.09079 1.98408 1.75272 1.30050 1.96822 1.19297 0.87928 0.94541 0.89304 1.58323 1.48840 1.02870 1.17156 1.19779 0.96942 0.95589 0.79674 1.21073 1.32156 1.08997 0.93755 0.91457 1.24963 0.96089 0.97949 0.95195 1.69958 1.44970 1.40190 0.97993 0.86369 0.79958 0.82377 0.78307 1.19516 1.20934 1.20827 0.90265 0.88750 0.91684 0.82643 0.82625 0.82486 0.97408 0.94708 0.92596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.36 9.77 36.01 0.35 -1.01 16 2 C -0.07 -0.98 5.90 -104.43 -0.62 -1.59 16 3 C -0.04 -0.59 9.20 -39.61 -0.36 -0.95 16 4 C -0.06 -0.86 6.85 -79.92 -0.55 -1.40 16 5 N 0.04 0.59 4.45 33.98 0.15 0.74 16 6 O -0.17 -2.68 18.44 -29.46 -0.54 -3.22 16 7 O -0.17 -2.57 18.44 -29.46 -0.54 -3.11 16 8 C -0.04 -0.59 9.33 -39.58 -0.37 -0.96 16 9 C -0.09 -1.34 6.33 -39.31 -0.25 -1.59 16 10 Cl -0.03 -0.52 27.24 -51.86 -1.41 -1.94 16 11 C 0.19 3.11 5.24 -83.73 -0.44 2.67 16 12 N -0.64 -11.91 5.15 -59.49 -0.31 -12.21 16 13 C 0.20 4.67 5.31 -4.97 -0.03 4.64 16 14 C -0.52 -13.30 9.36 -34.44 -0.32 -13.63 16 15 H 0.07 1.69 7.81 -52.49 -0.41 1.28 16 16 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 17 N -0.89 -24.87 13.29 55.43 0.74 -24.14 16 18 Si 0.90 20.26 29.54 -169.99 -5.02 15.24 16 19 H -0.27 -5.95 7.11 56.52 0.40 -5.54 16 20 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 21 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 22 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 23 H 0.09 1.35 7.46 -51.93 -0.39 0.97 16 24 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 25 H 0.16 1.73 7.60 -52.49 -0.40 1.33 16 26 H 0.16 1.97 7.60 -52.49 -0.40 1.57 16 27 H 0.35 6.30 7.69 -39.29 -0.30 6.00 16 28 H 0.01 0.20 7.71 -51.93 -0.40 -0.20 16 29 H 0.03 0.87 8.12 -51.93 -0.42 0.45 16 30 H 0.26 6.98 8.31 -40.82 -0.34 6.64 16 LS Contribution 289.16 15.07 4.36 4.36 Total: -1.00 -27.15 289.16 -7.96 -35.10 By element: Atomic # 1 Polarization: 4.20 SS G_CDS: -2.70 Total: 1.51 kcal Atomic # 6 Polarization: -9.65 SS G_CDS: -2.68 Total: -12.33 kcal Atomic # 7 Polarization: -36.19 SS G_CDS: 0.58 Total: -35.61 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.09 Total: -6.33 kcal Atomic # 14 Polarization: 20.26 SS G_CDS: -5.02 Total: 15.24 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.41 Total: -1.94 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -27.15 -7.96 -35.10 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309703611.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.606 kcal (2) G-P(sol) polarization free energy of solvation -27.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.461 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.957 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.102 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.504 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds