Wall clock time and date at job start Mon Mar 30 2020 01:32:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43208 * 179.97438 * 2 1 4 4 C 1.39677 * 120.11395 * 215.55372 * 3 2 1 5 5 C 1.37965 * 119.99685 * 179.97438 * 4 3 2 6 6 C 1.38250 * 120.23589 * 359.71511 * 5 4 3 7 7 C 1.50694 * 119.89087 * 180.27785 * 6 5 4 8 8 F 1.39903 * 109.47076 * 0.28333 * 7 6 5 9 9 F 1.39901 * 109.47439 * 120.27926 * 7 6 5 10 10 F 1.39901 * 109.47674 * 240.28417 * 7 6 5 11 11 C 1.38991 * 120.22668 * 0.56417 * 6 5 4 12 12 N 1.39705 * 120.00066 * 179.71701 * 11 6 5 13 13 C 1.46506 * 120.00270 * 179.72437 * 12 11 6 14 14 C 1.50703 * 109.47289 * 179.97438 * 13 12 11 15 15 H 1.07994 * 119.99399 * 0.02562 * 14 13 12 16 16 C 1.37874 * 119.99789 * 179.97438 * 14 13 12 17 17 N 1.31518 * 120.00144 * 0.02562 * 16 14 13 18 18 Si 1.86803 * 119.99733 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.46632 * 90.00476 * 18 16 14 20 20 H 1.48496 * 109.46690 * 210.00029 * 18 16 14 21 21 H 1.48498 * 109.47171 * 330.00226 * 18 16 14 22 22 C 1.38664 * 119.99930 * 359.44087 * 11 6 5 23 23 H 1.07999 * 120.00143 * 359.97438 * 4 3 2 24 24 H 1.08006 * 119.88692 * 180.02562 * 5 4 3 25 25 H 0.97001 * 120.00479 * 359.72055 * 12 11 6 26 26 H 1.09001 * 109.47060 * 300.00276 * 13 12 11 27 27 H 1.09004 * 109.47073 * 59.99765 * 13 12 11 28 28 H 0.96997 * 119.99752 * 179.97438 * 17 16 14 29 29 H 1.08000 * 120.11620 * 180.25961 * 22 11 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2684 0.9839 0.7026 5 6 4.6481 0.9820 0.7013 6 6 5.3422 0.0056 0.0113 7 6 6.8492 0.0072 0.0204 8 9 7.3097 1.0791 0.7925 9 9 7.3135 -1.1942 0.5665 10 9 7.3234 0.1382 -1.2893 11 6 4.6551 -0.9740 -0.6958 12 7 5.3613 -1.9549 -1.3963 13 6 4.6370 -2.9911 -2.1367 14 6 5.6237 -3.9178 -2.7992 15 1 6.6841 -3.7517 -2.6802 16 6 5.1724 -4.9781 -3.5562 17 7 3.8809 -5.1805 -3.7005 18 14 6.3954 -6.1263 -4.3780 19 1 6.7207 -7.2445 -3.4565 20 1 5.8023 -6.6699 -5.6260 21 1 7.6353 -5.3772 -4.7045 22 6 3.2684 -0.9811 -0.7012 23 1 2.7300 1.7458 1.2467 24 1 5.1878 1.7429 1.2455 25 1 6.3313 -1.9500 -1.3927 26 1 4.0105 -3.5586 -1.4485 27 1 4.0108 -2.5240 -2.8969 28 1 3.5635 -5.9262 -4.2334 29 1 2.7326 -1.7439 -1.2465 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000362687895.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:32:02 Heat of formation + Delta-G solvation = -103.569247 kcal Electronic energy + Delta-G solvation = -19941.076546 eV Core-core repulsion = 16220.930368 eV Total energy + Delta-G solvation = -3720.146178 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.067 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -49.99797 -47.53451 -47.40348 -39.62364 -36.65693 -35.30240 -32.88585 -31.99190 -29.69193 -26.90403 -26.24475 -23.53206 -22.54551 -21.20758 -19.12783 -18.28619 -18.27919 -18.21723 -16.71906 -15.59597 -15.21409 -14.74418 -14.42984 -14.36724 -14.33102 -14.05328 -13.87896 -13.79308 -13.64746 -13.59249 -13.33953 -13.30489 -12.68016 -12.59102 -12.18097 -12.05283 -11.51553 -11.23750 -11.04808 -10.96782 -10.31268 -9.90249 -9.57331 -9.11282 -8.69578 -7.15534 -6.33349 -4.39827 0.63830 1.59695 2.69768 2.87034 2.92474 3.17393 3.24317 3.26875 3.78313 3.84796 3.87007 4.12615 4.18668 4.29707 4.62939 4.90793 5.04851 5.17831 5.43775 5.51727 5.80846 6.04188 6.23604 6.35121 6.60563 6.88363 7.16102 7.41433 7.49487 7.72647 7.81500 8.25644 8.67118 9.27445 10.76956 Molecular weight = 270.07amu Principal moments of inertia in cm(-1) A = 0.014898 B = 0.006629 C = 0.004727 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1878.986742 B = 4222.585445 C = 5921.765153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.261 3.739 3 C 0.049 3.951 4 C -0.161 4.161 5 C -0.021 4.021 6 C -0.268 4.268 7 C 0.513 3.487 8 F -0.181 7.181 9 F -0.177 7.177 10 F -0.177 7.177 11 C 0.279 3.721 12 N -0.708 5.708 13 C 0.243 3.757 14 C -0.544 4.544 15 H 0.064 0.936 16 C 0.067 3.933 17 N -0.887 5.887 18 Si 0.905 3.095 19 H -0.277 1.277 20 H -0.283 1.283 21 H -0.271 1.271 22 C -0.150 4.150 23 H 0.133 0.867 24 H 0.139 0.861 25 H 0.397 0.603 26 H 0.030 0.970 27 H 0.030 0.970 28 H 0.268 0.732 29 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.678 11.147 7.970 14.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.093 5.093 2 C -0.055 4.055 3 C 0.045 3.955 4 C -0.184 4.184 5 C -0.040 4.040 6 C -0.277 4.277 7 C 0.458 3.542 8 F -0.163 7.163 9 F -0.159 7.159 10 F -0.159 7.159 11 C 0.164 3.836 12 N -0.327 5.327 13 C 0.122 3.878 14 C -0.582 4.582 15 H 0.083 0.917 16 C -0.137 4.137 17 N -0.524 5.524 18 Si 0.732 3.268 19 H -0.203 1.203 20 H -0.209 1.209 21 H -0.196 1.196 22 C -0.176 4.176 23 H 0.151 0.849 24 H 0.157 0.843 25 H 0.233 0.767 26 H 0.048 0.952 27 H 0.048 0.952 28 H 0.078 0.922 29 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.736 10.774 7.697 13.355 hybrid contribution 1.658 -0.754 -0.528 1.896 sum 3.394 10.020 7.169 12.779 Atomic orbital electron populations 1.81216 1.12090 1.07917 1.08088 1.25710 0.92673 0.93475 0.93614 1.15847 0.83959 0.96772 0.98969 1.20609 0.93252 1.00369 1.04211 1.20499 0.93703 0.95288 0.94490 1.19499 0.90214 1.04477 1.13475 1.18208 0.88877 0.73455 0.73617 1.93124 1.90611 1.56744 1.75790 1.93227 1.90551 1.46256 1.85827 1.93227 1.90258 1.95454 1.36940 1.17425 0.91318 0.86921 0.87950 1.45992 1.09190 1.27466 1.50060 1.19374 0.93144 0.84457 0.90798 1.21113 0.93067 1.11773 1.32256 0.91737 1.24903 0.95554 0.97367 0.95869 1.69925 1.12829 1.30271 1.39392 0.86376 0.80884 0.80649 0.78882 1.20319 1.20893 1.19609 1.20745 0.91774 1.01041 1.03995 0.84935 0.84308 0.76679 0.95200 0.95195 0.92241 0.83540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -6.69 18.54 41.84 0.78 -5.91 15 2 C 0.26 3.71 15.33 -22.47 -0.34 3.37 15 3 C 0.05 0.65 5.73 -106.96 -0.61 0.03 15 4 C -0.16 -1.77 9.75 -39.14 -0.38 -2.15 15 5 C -0.02 -0.24 9.41 -39.68 -0.37 -0.61 15 6 C -0.27 -3.78 5.39 -104.34 -0.56 -4.34 15 7 C 0.51 7.26 2.80 36.00 0.10 7.36 15 8 F -0.18 -2.28 15.96 2.25 0.04 -2.25 15 9 F -0.18 -2.71 16.24 2.25 0.04 -2.67 15 10 F -0.18 -2.71 16.22 2.25 0.04 -2.67 15 11 C 0.28 4.57 6.54 -83.83 -0.55 4.02 15 12 N -0.71 -13.57 5.46 -59.84 -0.33 -13.90 15 13 C 0.24 5.60 4.66 -5.19 -0.02 5.57 15 14 C -0.54 -13.91 9.28 -34.44 -0.32 -14.23 15 15 H 0.06 1.61 7.60 -52.49 -0.40 1.21 15 16 C 0.07 1.76 5.46 -17.82 -0.10 1.66 15 17 N -0.89 -24.30 13.29 55.43 0.74 -23.57 15 18 Si 0.91 20.17 29.54 -169.99 -5.02 15.15 15 19 H -0.28 -6.13 7.11 56.52 0.40 -5.73 15 20 H -0.28 -6.29 7.11 56.52 0.40 -5.88 15 21 H -0.27 -5.96 7.11 56.52 0.40 -5.56 15 22 C -0.15 -2.32 9.01 -38.95 -0.35 -2.67 15 23 H 0.13 1.11 8.06 -52.49 -0.42 0.69 15 24 H 0.14 1.22 7.14 -52.48 -0.37 0.85 15 25 H 0.40 7.51 5.72 -40.82 -0.23 7.28 15 26 H 0.03 0.73 7.95 -51.93 -0.41 0.32 15 27 H 0.03 0.73 7.95 -51.93 -0.41 0.32 15 28 H 0.27 6.96 8.31 -40.82 -0.34 6.62 15 29 H 0.15 2.43 6.73 -52.49 -0.35 2.08 15 LS Contribution 279.36 15.07 4.21 4.21 Total: -1.00 -26.63 279.36 -4.77 -31.40 By element: Atomic # 1 Polarization: 3.93 SS G_CDS: -1.74 Total: 2.19 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -3.51 Total: -1.99 kcal Atomic # 7 Polarization: -44.56 SS G_CDS: 1.19 Total: -43.38 kcal Atomic # 9 Polarization: -7.70 SS G_CDS: 0.11 Total: -7.59 kcal Atomic # 14 Polarization: 20.17 SS G_CDS: -5.02 Total: 15.15 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -26.63 -4.77 -31.40 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000362687895.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.165 kcal (2) G-P(sol) polarization free energy of solvation -26.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.795 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.774 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.404 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds