Wall clock time and date at job start Mon Mar 30 2020 00:49:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31515 * 1 3 3 Si 1.86800 * 120.00040 * 2 1 4 4 H 1.48495 * 109.47405 * 240.00267 * 3 2 1 5 5 H 1.48506 * 109.47027 * 0.02562 * 3 2 1 6 6 H 1.48500 * 109.47090 * 120.00272 * 3 2 1 7 7 C 1.37880 * 119.99924 * 180.02562 * 2 1 3 8 8 H 1.08002 * 119.99703 * 179.97438 * 7 2 1 9 9 C 1.50696 * 119.99722 * 359.97438 * 7 2 1 10 10 N 1.46904 * 109.46800 * 180.02562 * 9 7 2 11 11 C 1.46899 * 111.00029 * 180.02562 * 10 9 7 12 12 C 1.50703 * 109.47107 * 179.97438 * 11 10 9 13 13 C 1.38241 * 119.99281 * 259.99823 * 12 11 10 14 14 C 1.38323 * 119.98586 * 179.97438 * 13 12 11 15 15 Cl 1.73604 * 120.01264 * 179.97438 * 14 13 12 16 16 C 1.38377 * 119.97418 * 359.97438 * 14 13 12 17 17 C 1.38193 * 119.98778 * 0.02562 * 16 14 13 18 18 C 1.38216 * 119.99191 * 79.72219 * 12 11 10 19 19 N 1.48012 * 119.98808 * 359.97438 * 18 12 11 20 20 O 1.21809 * 120.00144 * 179.97438 * 19 18 12 21 21 O 1.21796 * 120.00040 * 0.02562 * 19 18 12 22 22 H 0.96998 * 120.00185 * 359.97438 * 1 2 3 23 23 H 1.08995 * 109.47455 * 60.00159 * 9 7 2 24 24 H 1.09003 * 109.47449 * 299.99392 * 9 7 2 25 25 H 1.00908 * 110.99583 * 303.94914 * 10 9 7 26 26 H 1.09002 * 109.47043 * 299.99792 * 11 10 9 27 27 H 1.09001 * 109.47354 * 59.99854 * 11 10 9 28 28 H 1.07999 * 120.00276 * 359.95449 * 13 12 11 29 29 H 1.08000 * 120.00461 * 180.02562 * 16 14 13 30 30 H 1.07999 * 119.99518 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 3.1029 1.6965 -1.2125 5 1 1.2841 2.7465 0.0006 6 1 3.1030 1.6964 1.2125 7 6 2.0045 -1.1941 -0.0005 8 1 3.0846 -1.1940 -0.0010 9 6 1.2510 -2.4991 -0.0005 10 7 2.2056 -3.6157 -0.0005 11 6 1.5053 -4.9070 -0.0011 12 6 2.5148 -6.0259 -0.0018 13 6 2.8233 -6.6777 -1.1812 14 6 3.7503 -7.7044 -1.1817 15 17 4.1377 -8.5238 -2.6623 16 6 4.3688 -8.0780 -0.0016 17 6 4.0596 -7.4257 1.1769 18 6 3.1363 -6.3964 1.1759 19 7 2.8105 -5.6937 2.4372 20 8 3.3577 -6.0204 3.4752 21 8 1.9946 -4.7895 2.4373 22 1 -0.4850 0.8400 0.0004 23 1 0.6240 -2.5567 -0.8902 24 1 0.6247 -2.5571 0.8897 25 1 2.8404 -3.5486 -0.7820 26 1 0.8801 -4.9817 0.8886 27 1 0.8807 -4.9812 -0.8913 28 1 2.3403 -6.3856 -2.1020 29 1 5.0929 -8.8792 -0.0014 30 1 4.5419 -7.7175 2.0981 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000379467652.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:49:48 Heat of formation + Delta-G solvation = 22.245403 kcal Electronic energy + Delta-G solvation = -17939.910811 eV Core-core repulsion = 14764.644256 eV Total energy + Delta-G solvation = -3175.266555 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.92497 -39.72288 -37.10354 -36.38430 -35.30260 -32.84800 -31.84070 -31.37154 -27.52539 -26.15331 -24.56816 -22.74544 -21.88839 -21.41476 -18.93379 -18.24519 -17.18075 -17.08979 -16.26025 -16.11460 -15.04904 -14.73013 -14.41329 -14.13095 -13.67843 -13.33392 -13.21781 -12.40196 -12.06641 -12.01074 -11.85694 -11.41960 -11.18634 -11.07551 -10.75313 -10.68249 -10.66691 -10.28068 -9.94796 -9.55217 -9.43265 -9.17745 -8.45741 -7.39946 -6.00943 -4.02557 -0.18099 0.63879 1.39932 1.44008 1.72827 2.96348 3.35809 3.39887 3.43380 4.10164 4.18783 4.45275 4.49401 4.55760 4.88894 5.18635 5.30407 5.35347 5.38471 5.48727 5.57202 5.87791 5.98541 6.09589 6.74079 7.20323 7.38919 7.75707 8.00595 8.11300 8.31648 8.53935 9.04575 9.61687 11.10137 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.020421 B = 0.004803 C = 0.004179 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1370.781115 B = 5828.826553 C = 6697.901515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.897 5.897 2 C 0.058 3.942 3 Si 0.899 3.101 4 H -0.278 1.278 5 H -0.287 1.287 6 H -0.276 1.276 7 C -0.514 4.514 8 H 0.060 0.940 9 C 0.200 3.800 10 N -0.672 5.672 11 C 0.076 3.924 12 C 0.009 3.991 13 C -0.111 4.111 14 C 0.009 3.991 15 Cl -0.049 7.049 16 C -0.120 4.120 17 C -0.046 4.046 18 C -0.024 4.024 19 N 0.025 4.975 20 O -0.197 6.197 21 O -0.089 6.089 22 H 0.262 0.738 23 H -0.013 1.013 24 H 0.038 0.962 25 H 0.325 0.675 26 H 0.109 0.891 27 H 0.037 0.963 28 H 0.154 0.846 29 H 0.153 0.847 30 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.073 -18.991 -3.241 20.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.536 5.536 2 C -0.144 4.144 3 Si 0.727 3.273 4 H -0.204 1.204 5 H -0.213 1.213 6 H -0.201 1.201 7 C -0.552 4.552 8 H 0.078 0.922 9 C 0.074 3.926 10 N -0.302 5.302 11 C -0.053 4.053 12 C 0.007 3.993 13 C -0.131 4.131 14 C -0.018 4.018 15 Cl -0.019 7.019 16 C -0.140 4.140 17 C -0.065 4.065 18 C -0.108 4.108 19 N 0.546 4.454 20 O -0.400 6.400 21 O -0.319 6.319 22 H 0.072 0.928 23 H 0.005 0.995 24 H 0.056 0.944 25 H 0.141 0.859 26 H 0.127 0.873 27 H 0.055 0.945 28 H 0.172 0.828 29 H 0.171 0.829 30 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 7.249 -19.321 -3.226 20.887 hybrid contribution 0.129 0.947 -0.806 1.250 sum 7.378 -18.374 -4.032 20.207 Atomic orbital electron populations 1.69944 1.06026 1.26912 1.50727 1.24948 0.94860 0.99241 0.95303 0.86550 0.79436 0.82726 0.78607 1.20403 1.21315 1.20109 1.21084 0.93388 0.90151 1.50611 0.92179 1.19571 0.90339 0.86484 0.96233 1.60738 1.21264 0.99863 1.48345 1.21378 0.92917 0.88010 1.02997 1.20093 0.94433 0.95093 0.89710 1.21087 0.98154 0.95230 0.98631 1.21267 0.97065 0.95011 0.88496 1.98411 1.93021 1.77487 1.33014 1.20985 1.01509 1.01795 0.89708 1.20973 0.93691 0.91857 1.00004 1.21043 1.04542 0.99613 0.85596 1.43418 0.99923 1.00214 1.01837 1.94492 1.54191 1.70690 1.20671 1.94672 1.25834 1.19007 1.92348 0.92836 0.99531 0.94361 0.85918 0.87346 0.94478 0.82813 0.82947 0.82295 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -26.71 13.29 55.43 0.74 -25.97 16 2 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 3 Si 0.90 21.84 29.54 -169.99 -5.02 16.82 16 4 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 5 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 6 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 7 C -0.51 -14.53 9.32 -34.44 -0.32 -14.85 16 8 H 0.06 1.68 7.81 -52.49 -0.41 1.27 16 9 C 0.20 5.14 5.44 -4.98 -0.03 5.11 16 10 N -0.67 -14.03 5.71 -116.34 -0.66 -14.69 16 11 C 0.08 1.29 4.83 -4.98 -0.02 1.26 16 12 C 0.01 0.13 5.39 -104.63 -0.56 -0.44 16 13 C -0.11 -1.24 9.45 -39.55 -0.37 -1.61 16 14 C 0.01 0.08 6.32 -39.50 -0.25 -0.17 16 15 Cl -0.05 -0.42 28.96 -51.86 -1.50 -1.92 16 16 C -0.12 -1.06 9.83 -39.55 -0.39 -1.44 16 17 C -0.05 -0.50 9.55 -39.59 -0.38 -0.87 16 18 C -0.02 -0.35 6.85 -79.95 -0.55 -0.89 16 19 N 0.02 0.44 4.45 33.96 0.15 0.59 16 20 O -0.20 -3.45 18.45 -29.46 -0.54 -4.00 16 21 O -0.09 -1.79 14.74 -29.46 -0.43 -2.23 16 22 H 0.26 7.39 8.31 -40.82 -0.34 7.05 16 23 H -0.01 -0.35 8.14 -51.93 -0.42 -0.77 16 24 H 0.04 1.07 8.14 -51.93 -0.42 0.65 16 25 H 0.32 6.43 8.71 -39.29 -0.34 6.09 16 26 H 0.11 1.97 5.90 -51.93 -0.31 1.66 16 27 H 0.04 0.58 8.00 -51.93 -0.42 0.17 16 28 H 0.15 1.50 8.04 -52.49 -0.42 1.07 16 29 H 0.15 0.89 8.06 -52.49 -0.42 0.47 16 30 H 0.16 1.44 7.61 -52.49 -0.40 1.04 16 LS Contribution 287.62 15.07 4.33 4.33 Total: -1.00 -31.07 287.62 -8.61 -39.68 By element: Atomic # 1 Polarization: 2.42 SS G_CDS: -2.70 Total: -0.27 kcal Atomic # 6 Polarization: -9.37 SS G_CDS: -2.97 Total: -12.34 kcal Atomic # 7 Polarization: -40.30 SS G_CDS: 0.22 Total: -40.08 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -0.98 Total: -6.23 kcal Atomic # 14 Polarization: 21.84 SS G_CDS: -5.02 Total: 16.82 kcal Atomic # 17 Polarization: -0.42 SS G_CDS: -1.50 Total: -1.92 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -31.07 -8.61 -39.68 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000379467652.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.928 kcal (2) G-P(sol) polarization free energy of solvation -31.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.612 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.683 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds