Wall clock time and date at job start Mon Mar 30 2020 01:30:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 O 1.45206 * 109.47114 * 234.65585 * 3 2 1 5 5 C 1.34866 * 116.99980 * 176.79222 * 4 3 2 6 6 O 1.21590 * 120.00075 * 5.47758 * 5 4 3 7 7 C 1.46709 * 119.99774 * 185.47261 * 5 4 3 8 8 C 1.36214 * 125.44728 * 174.78259 * 7 5 4 9 9 C 1.41664 * 107.74339 * 180.02562 * 8 7 5 10 10 C 1.40044 * 133.33901 * 179.97438 * 9 8 7 11 11 C 1.36559 * 119.83100 * 180.02562 * 10 9 8 12 12 C 1.38867 * 120.60163 * 359.97438 * 11 10 9 13 13 C 1.37835 * 120.63663 * 0.28626 * 12 11 10 14 14 C 1.39088 * 119.81860 * 359.47484 * 13 12 11 15 15 N 1.37815 * 133.15442 * 180.18904 * 14 13 12 16 16 C 1.36869 * 125.62543 * 0.28608 * 15 14 13 17 17 H 1.08003 * 120.00895 * 135.89624 * 16 15 14 18 18 C 1.39026 * 119.99821 * 315.90017 * 16 15 14 19 19 N 1.31339 * 120.00507 * 157.83127 * 18 16 15 20 20 Si 1.86808 * 119.99699 * 337.83297 * 18 16 15 21 21 H 1.48502 * 109.47061 * 95.71645 * 20 18 16 22 22 H 1.48500 * 109.46831 * 215.71068 * 20 18 16 23 23 H 1.48496 * 109.47093 * 335.71549 * 20 18 16 24 24 H 1.09000 * 109.47249 * 114.65615 * 3 2 1 25 25 H 1.09003 * 109.47706 * 354.65634 * 3 2 1 26 26 H 1.07994 * 126.13019 * 0.05153 * 8 7 5 27 27 H 1.08002 * 120.08276 * 359.97438 * 10 9 8 28 28 H 1.07997 * 119.70109 * 179.97438 * 11 10 9 29 29 H 1.08002 * 119.67941 * 180.02562 * 12 11 10 30 30 H 1.08003 * 120.09502 * 179.65548 * 13 12 11 31 31 H 0.96997 * 120.00511 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 8 3.0916 0.7928 1.1167 5 6 4.4269 0.8412 1.3002 6 8 5.1710 0.3211 0.4914 7 6 4.9815 1.5214 2.4758 8 6 6.2983 1.5512 2.8232 9 6 6.4132 2.3070 4.0158 10 6 7.4984 2.6689 4.8236 11 6 7.2906 3.4242 5.9422 12 6 6.0110 3.8386 6.2876 13 6 4.9264 3.4906 5.5115 14 6 5.1135 2.7261 4.3646 15 7 4.2514 2.2349 3.4082 16 6 2.8957 2.4218 3.3855 17 1 2.4011 2.6775 2.4600 18 6 2.1552 2.2826 4.5538 19 7 0.9806 2.8606 4.6598 20 14 2.8308 1.2732 5.9732 21 1 3.5030 2.1731 6.9446 22 1 1.7166 0.5602 6.6480 23 1 3.8099 0.2842 5.4552 24 1 2.9711 0.4295 -0.9340 25 1 2.9719 -1.0224 0.0957 26 1 7.1094 1.0829 2.2856 27 1 8.4971 2.3508 4.5630 28 1 8.1289 3.7018 6.5638 29 1 5.8637 4.4359 7.1754 30 1 3.9344 3.8130 5.7914 31 1 0.4641 2.7638 5.4750 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000729766682.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:39 Heat of formation + Delta-G solvation = 15.531713 kcal Electronic energy + Delta-G solvation = -19844.840968 eV Core-core repulsion = 16671.716135 eV Total energy + Delta-G solvation = -3173.124833 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.079 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.93095 -39.67587 -36.79831 -36.28782 -35.75495 -33.65994 -31.47643 -29.70430 -29.12305 -28.09767 -24.99086 -23.79936 -21.25174 -20.84768 -19.46447 -18.51714 -17.99579 -17.44253 -16.41589 -15.89992 -15.65446 -15.20185 -14.57894 -14.23698 -13.77317 -13.61042 -13.28792 -13.10733 -13.03711 -12.82683 -12.44943 -12.18645 -12.17004 -11.95116 -11.48108 -11.09048 -11.07161 -10.60342 -10.52117 -10.34888 -10.32944 -9.99030 -9.52326 -8.80193 -7.51133 -7.11172 -7.01958 -4.63087 1.32151 2.14532 2.38082 2.53857 2.77599 2.94986 3.05654 3.15281 3.46833 3.77201 3.81362 3.92387 4.11574 4.49206 4.69342 5.03467 5.15663 5.41370 5.53061 5.64224 5.79270 6.07189 6.13437 6.26045 6.45134 6.57544 6.64251 6.74101 7.08058 7.16250 7.25838 7.46037 7.49873 7.51253 7.76110 8.02839 8.18935 8.58127 8.89911 10.02242 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.018465 B = 0.008171 C = 0.006063 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1516.034592 B = 3425.988052 C = 4617.392139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.214 3.786 3 C 0.162 3.838 4 O -0.324 6.324 5 C 0.553 3.447 6 O -0.517 6.517 7 C -0.018 4.018 8 C -0.150 4.150 9 C -0.126 4.126 10 C -0.076 4.076 11 C -0.156 4.156 12 C -0.131 4.131 13 C -0.095 4.095 14 C 0.057 3.943 15 N -0.255 5.255 16 C -0.342 4.342 17 H 0.129 0.871 18 C 0.086 3.914 19 N -0.813 5.813 20 Si 0.865 3.135 21 H -0.246 1.246 22 H -0.278 1.278 23 H -0.253 1.253 24 H 0.115 0.885 25 H 0.114 0.886 26 H 0.141 0.859 27 H 0.112 0.888 28 H 0.110 0.890 29 H 0.113 0.887 30 H 0.119 0.881 31 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.164 -2.407 -1.176 7.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.080 5.080 2 C -0.105 4.105 3 C 0.084 3.916 4 O -0.239 6.239 5 C 0.400 3.600 6 O -0.407 6.407 7 C -0.130 4.130 8 C -0.177 4.177 9 C -0.130 4.130 10 C -0.095 4.095 11 C -0.175 4.175 12 C -0.152 4.152 13 C -0.114 4.114 14 C -0.057 4.057 15 N 0.082 4.918 16 C -0.469 4.469 17 H 0.146 0.854 18 C -0.130 4.130 19 N -0.440 5.440 20 Si 0.688 3.312 21 H -0.171 1.171 22 H -0.204 1.204 23 H -0.177 1.177 24 H 0.133 0.867 25 H 0.132 0.868 26 H 0.159 0.841 27 H 0.130 0.870 28 H 0.128 0.872 29 H 0.131 0.869 30 H 0.137 0.863 31 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 5.039 -2.478 -1.409 5.789 hybrid contribution 0.354 -0.501 0.634 0.883 sum 5.393 -2.979 -0.774 6.210 Atomic orbital electron populations 1.81200 1.12445 1.07645 1.06701 1.28353 0.94267 0.93747 0.94085 1.19885 0.81645 0.98585 0.91442 1.86974 1.25005 1.64696 1.47182 1.19944 0.79312 0.76874 0.83837 1.90832 1.59922 1.46129 1.43787 1.19101 0.91894 1.06080 0.95929 1.20388 0.93579 1.06002 0.97739 1.17921 0.92721 1.04751 0.97649 1.20161 0.96686 0.98218 0.94436 1.20381 0.96474 1.02215 0.98406 1.20607 0.92258 1.02436 0.99868 1.20204 0.99272 0.98725 0.93245 1.18411 0.89167 1.02663 0.95495 1.40392 1.05837 1.30022 1.15507 1.19476 0.78442 1.49470 0.99515 0.85382 1.25480 0.95029 0.94319 0.98146 1.69711 1.11941 1.33757 1.28616 0.86967 0.79722 0.82203 0.82264 1.17076 1.20430 1.17669 0.86720 0.86819 0.84084 0.86976 0.87152 0.86863 0.86337 0.90100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -7.11 18.54 42.15 0.78 -6.33 16 2 C 0.21 3.26 15.83 -20.76 -0.33 2.93 16 3 C 0.16 2.10 5.96 34.37 0.20 2.30 16 4 O -0.32 -5.97 8.14 -40.95 -0.33 -6.30 16 5 C 0.55 10.79 7.90 34.15 0.27 11.06 16 6 O -0.52 -9.79 16.65 -19.33 -0.32 -10.12 16 7 C -0.02 -0.38 6.76 -82.27 -0.56 -0.94 16 8 C -0.15 -3.01 10.55 -39.00 -0.41 -3.42 16 9 C -0.13 -2.59 6.16 -106.89 -0.66 -3.25 16 10 C -0.08 -1.33 10.06 -39.51 -0.40 -1.73 16 11 C -0.16 -2.57 9.97 -39.95 -0.40 -2.97 16 12 C -0.13 -2.35 10.02 -39.50 -0.40 -2.75 16 13 C -0.09 -2.01 7.04 -39.41 -0.28 -2.29 16 14 C 0.06 1.29 5.21 -83.84 -0.44 0.86 16 15 N -0.25 -6.03 2.37 -56.10 -0.13 -6.16 16 16 C -0.34 -8.61 8.93 -15.01 -0.13 -8.75 16 17 H 0.13 3.41 7.34 -52.48 -0.39 3.02 16 18 C 0.09 2.15 4.81 -17.47 -0.08 2.07 16 19 N -0.81 -20.98 13.95 55.50 0.77 -20.20 16 20 Si 0.87 19.64 24.72 -169.99 -4.20 15.44 16 21 H -0.25 -5.31 5.87 56.52 0.33 -4.97 16 22 H -0.28 -6.20 7.11 56.52 0.40 -5.79 16 23 H -0.25 -6.04 7.11 56.52 0.40 -5.63 16 24 H 0.12 1.17 8.14 -51.93 -0.42 0.74 16 25 H 0.11 1.18 8.13 -51.93 -0.42 0.76 16 26 H 0.14 2.47 8.06 -52.49 -0.42 2.04 16 27 H 0.11 1.61 8.06 -52.49 -0.42 1.19 16 28 H 0.11 1.46 8.06 -52.49 -0.42 1.03 16 29 H 0.11 1.71 8.06 -52.49 -0.42 1.29 16 30 H 0.12 2.58 6.18 -52.48 -0.32 2.26 16 31 H 0.29 6.85 8.31 -40.82 -0.34 6.51 16 LS Contribution 283.97 15.07 4.28 4.28 Total: -1.00 -28.59 283.97 -5.21 -33.80 By element: Atomic # 1 Polarization: 4.90 SS G_CDS: -2.45 Total: 2.45 kcal Atomic # 6 Polarization: -3.25 SS G_CDS: -3.60 Total: -6.86 kcal Atomic # 7 Polarization: -34.11 SS G_CDS: 1.42 Total: -32.69 kcal Atomic # 8 Polarization: -15.77 SS G_CDS: -0.66 Total: -16.42 kcal Atomic # 14 Polarization: 19.64 SS G_CDS: -4.20 Total: 15.44 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -28.59 -5.21 -33.80 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000729766682.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.335 kcal (2) G-P(sol) polarization free energy of solvation -28.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.741 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.803 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds