Wall clock time and date at job start Mon Mar 30 2020 01:00:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.50706 * 109.47238 * 120.00339 * 2 1 3 5 5 N 1.31936 * 119.01019 * 299.72956 * 4 2 1 6 6 C 1.32163 * 121.07817 * 179.71422 * 5 4 2 7 7 C 1.38954 * 119.12966 * 0.54570 * 6 5 4 8 8 Cl 1.73599 * 120.88877 * 179.71053 * 7 6 5 9 9 C 1.39746 * 118.21566 * 359.73288 * 7 6 5 10 10 C 1.48164 * 120.56585 * 179.97438 * 9 7 6 11 11 O 1.21451 * 119.99966 * 0.02562 * 10 9 7 12 12 O 1.34655 * 119.99614 * 180.02562 * 10 9 7 13 13 C 1.34789 * 116.99867 * 180.02562 * 12 10 9 14 14 H 1.08000 * 120.00073 * 359.97438 * 13 12 10 15 15 C 1.38892 * 119.99961 * 179.97438 * 13 12 10 16 16 N 1.31365 * 120.00191 * 359.97438 * 15 13 12 17 17 Si 1.86803 * 119.99910 * 179.97438 * 15 13 12 18 18 H 1.48504 * 109.46910 * 60.00316 * 17 15 13 19 19 H 1.48507 * 109.47087 * 179.97438 * 17 15 13 20 20 H 1.48495 * 109.47201 * 299.99848 * 17 15 13 21 21 N 1.31504 * 119.01621 * 119.99770 * 4 2 1 22 22 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 23 23 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 24 24 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.47533 * 239.99846 * 2 1 3 26 26 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 27 27 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 28 28 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 29 29 H 1.07997 * 120.43415 * 180.25455 * 6 5 4 30 30 H 0.97000 * 120.00079 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0324 -0.7105 1.2305 5 7 1.7062 -0.2399 2.4191 6 6 2.1195 -0.8338 3.5250 7 6 2.9197 -1.9656 3.4264 8 17 3.4944 -2.7774 4.8492 9 6 3.2498 -2.4323 2.1512 10 6 4.1003 -3.6342 1.9856 11 8 4.5165 -4.2229 2.9629 12 8 4.4117 -4.0737 0.7515 13 6 5.1884 -5.1723 0.6710 14 1 5.5318 -5.6580 1.5724 15 6 5.5472 -5.6797 -0.5711 16 7 5.1291 -5.0892 -1.6676 17 14 6.6243 -7.2019 -0.6826 18 1 5.9441 -8.3396 -0.0131 19 1 6.8607 -7.5376 -2.1098 20 1 7.9237 -6.9389 -0.0136 21 7 2.7871 -1.7779 1.0873 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 1.8934 -0.5138 -0.8899 26 1 1.6768 1.9562 0.8900 27 1 3.1300 1.4424 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.8429 -0.4420 4.4926 30 1 5.3794 -5.4438 -2.5351 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000744674055.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:00:02 Heat of formation + Delta-G solvation = -34.989498 kcal Electronic energy + Delta-G solvation = -18084.202142 eV Core-core repulsion = 14906.453696 eV Total energy + Delta-G solvation = -3177.748447 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.04813 -38.87783 -36.56186 -35.44379 -35.11219 -33.69044 -32.34340 -30.69824 -27.12994 -26.44677 -24.84303 -24.30089 -21.84507 -19.92297 -18.16121 -17.69218 -17.28123 -15.90508 -15.45545 -15.36404 -14.71688 -14.45217 -14.24741 -14.07390 -13.83790 -13.01445 -12.64773 -12.18839 -11.93728 -11.78738 -11.78644 -11.36446 -11.09961 -11.08692 -10.90412 -10.79438 -10.77071 -10.54690 -10.34441 -10.00185 -9.50749 -8.95663 -8.73583 -8.71317 -6.61789 -4.19226 0.60864 0.98031 2.23487 3.04002 3.08992 3.14013 3.31600 3.59439 3.91660 4.07230 4.07497 4.23093 4.85471 4.93412 5.00589 5.01278 5.17640 5.33776 5.56069 5.66567 5.81215 5.86444 5.98923 6.17311 6.25223 6.41818 6.59785 6.94092 7.19673 7.74213 8.13230 8.54182 8.83511 9.67798 10.53517 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.017622 B = 0.006399 C = 0.004845 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1588.542237 B = 4374.524208 C = 5777.310474 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.028 4.028 3 C -0.139 4.139 4 C 0.318 3.682 5 N -0.502 5.502 6 C 0.157 3.843 7 C -0.120 4.120 8 Cl -0.010 7.010 9 C 0.193 3.807 10 C 0.417 3.583 11 O -0.527 6.527 12 O -0.173 6.173 13 C -0.366 4.366 14 H 0.103 0.897 15 C 0.043 3.957 16 N -0.836 5.836 17 Si 0.950 3.050 18 H -0.266 1.266 19 H -0.276 1.276 20 H -0.266 1.266 21 N -0.460 5.460 22 H 0.065 0.935 23 H 0.065 0.935 24 H 0.055 0.945 25 H 0.103 0.897 26 H 0.065 0.935 27 H 0.055 0.945 28 H 0.065 0.935 29 H 0.179 0.821 30 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.822 9.628 4.761 12.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.048 4.048 3 C -0.197 4.197 4 C 0.050 3.950 5 N -0.217 5.217 6 C -0.011 4.011 7 C -0.152 4.152 8 Cl 0.019 6.981 9 C 0.047 3.953 10 C 0.264 3.736 11 O -0.424 6.424 12 O -0.076 6.076 13 C -0.442 4.442 14 H 0.121 0.879 15 C -0.165 4.165 16 N -0.470 5.470 17 Si 0.773 3.227 18 H -0.191 1.191 19 H -0.201 1.201 20 H -0.191 1.191 21 N -0.176 5.176 22 H 0.084 0.916 23 H 0.084 0.916 24 H 0.074 0.926 25 H 0.121 0.879 26 H 0.084 0.916 27 H 0.074 0.926 28 H 0.084 0.916 29 H 0.196 0.804 30 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -6.932 9.796 4.044 12.664 hybrid contribution 0.867 -1.230 0.842 1.725 sum -6.065 8.566 4.886 11.577 Atomic orbital electron populations 1.21786 0.93086 1.02285 1.02572 1.20001 0.96481 0.95750 0.92547 1.21783 1.01232 0.94138 1.02573 1.23294 0.89774 0.88856 0.93062 1.68145 1.23208 1.31913 0.98446 1.23215 0.90414 0.89070 0.98355 1.22764 1.02982 0.98629 0.90863 1.98402 1.87007 1.77937 1.34754 1.20921 0.93322 0.93698 0.87358 1.19912 0.84586 0.85219 0.83911 1.90734 1.54513 1.57399 1.39736 1.83950 1.56126 1.40355 1.27214 1.21507 1.26027 1.01912 0.94790 0.87950 1.25539 0.97643 0.99474 0.93870 1.69989 1.40379 1.38563 0.98083 0.85639 0.79626 0.79563 0.77826 1.19118 1.20079 1.19114 1.68640 1.09304 1.07209 1.32462 0.91604 0.91606 0.92621 0.87927 0.91601 0.92629 0.91604 0.80416 0.91406 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.59 9.09 37.16 0.34 -1.25 16 2 C -0.03 -0.38 3.25 -91.77 -0.30 -0.68 16 3 C -0.14 -1.59 9.08 37.15 0.34 -1.25 16 4 C 0.32 5.46 6.34 -157.32 -1.00 4.46 16 5 N -0.50 -7.78 9.78 -10.70 -0.10 -7.88 16 6 C 0.16 2.31 11.14 -17.14 -0.19 2.12 16 7 C -0.12 -2.18 6.40 -38.75 -0.25 -2.42 16 8 Cl -0.01 -0.17 26.25 -51.86 -1.36 -1.53 16 9 C 0.19 4.26 6.79 -82.63 -0.56 3.70 16 10 C 0.42 10.89 7.90 34.81 0.27 11.16 16 11 O -0.53 -13.99 13.39 -19.23 -0.26 -14.25 16 12 O -0.17 -5.06 9.59 -21.25 -0.20 -5.27 16 13 C -0.37 -10.63 9.65 30.97 0.30 -10.33 16 14 H 0.10 2.93 6.86 -52.49 -0.36 2.57 16 15 C 0.04 1.16 5.50 -17.51 -0.10 1.07 16 16 N -0.84 -23.83 13.67 55.49 0.76 -23.07 16 17 Si 0.95 20.49 29.55 -169.99 -5.02 15.46 16 18 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 19 H -0.28 -5.68 7.11 56.52 0.40 -5.28 16 20 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 21 N -0.46 -9.76 10.11 -7.33 -0.07 -9.83 16 22 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 23 H 0.06 0.73 8.01 -51.93 -0.42 0.31 16 24 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 25 H 0.10 1.50 8.09 -51.93 -0.42 1.08 16 26 H 0.06 0.73 8.00 -51.93 -0.42 0.31 16 27 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 28 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.18 1.85 8.06 -52.49 -0.42 1.43 16 30 H 0.28 7.13 8.31 -40.82 -0.34 6.79 16 LS Contribution 288.70 15.07 4.35 4.35 Total: -1.00 -31.85 288.70 -5.92 -37.77 By element: Atomic # 1 Polarization: 0.55 SS G_CDS: -2.86 Total: -2.31 kcal Atomic # 6 Polarization: 7.71 SS G_CDS: -1.14 Total: 6.57 kcal Atomic # 7 Polarization: -41.36 SS G_CDS: 0.58 Total: -40.78 kcal Atomic # 8 Polarization: -19.05 SS G_CDS: -0.46 Total: -19.52 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -5.02 Total: 15.46 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.36 Total: -1.53 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -31.85 -5.92 -37.77 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000744674055.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.776 kcal (2) G-P(sol) polarization free energy of solvation -31.847 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.765 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds