Wall clock time and date at job start Mon Mar 30 2020 00:46:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 H 1.09003 * 109.47574 * 2 1 4 4 O 1.42904 * 109.47279 * 239.99888 * 2 1 3 5 5 C 1.35922 * 116.99682 * 84.82857 * 4 2 1 6 6 C 1.38721 * 120.04669 * 354.62442 * 5 4 2 7 7 C 1.38139 * 119.96413 * 179.97438 * 6 5 4 8 8 C 1.38366 * 120.03776 * 0.02562 * 7 6 5 9 9 Cl 1.73601 * 119.95832 * 179.97438 * 8 7 6 10 10 C 1.38370 * 120.08901 * 0.25077 * 8 7 6 11 11 C 1.38143 * 120.03833 * 359.49492 * 10 8 7 12 12 C 1.50700 * 109.47278 * 120.00202 * 2 1 3 13 13 O 1.21211 * 120.00392 * 119.99536 * 12 2 1 14 14 O 1.34316 * 119.99891 * 300.00037 * 12 2 1 15 15 C 1.34926 * 117.00047 * 180.02562 * 14 12 2 16 16 H 1.07996 * 119.99758 * 359.97438 * 15 14 12 17 17 C 1.38751 * 119.99738 * 180.02562 * 15 14 12 18 18 N 1.31438 * 120.00291 * 359.97438 * 17 15 14 19 19 Si 1.86805 * 119.99468 * 179.97438 * 17 15 14 20 20 H 1.48500 * 109.47295 * 59.99914 * 19 17 15 21 21 H 1.48497 * 109.46536 * 179.97438 * 19 17 15 22 22 H 1.48494 * 109.46909 * 299.99577 * 19 17 15 23 23 H 1.09004 * 109.47152 * 299.99968 * 1 2 3 24 24 H 1.09001 * 109.47594 * 59.99671 * 1 2 3 25 25 H 1.09003 * 109.47574 * 179.97438 * 1 2 3 26 26 H 1.08001 * 120.01830 * 359.97438 * 6 5 4 27 27 H 1.07999 * 119.98299 * 179.97438 * 7 6 5 28 28 H 1.08000 * 119.98219 * 179.72167 * 10 8 7 29 29 H 1.07997 * 120.02404 * 180.25826 * 11 10 8 30 30 H 0.96993 * 120.00190 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 8 2.0063 -0.6737 -1.1668 5 6 2.1091 0.0618 -2.3052 6 6 1.6547 1.3723 -2.3288 7 6 1.7605 2.1184 -3.4865 8 6 2.3188 1.5592 -4.6224 9 17 2.4500 2.4985 -6.0764 10 6 2.7673 0.2504 -4.6026 11 6 2.6681 -0.4972 -3.4452 12 6 2.0323 -0.7104 1.2304 13 8 2.7291 -1.6960 1.1192 14 8 1.7078 -0.2516 2.4504 15 6 2.1907 -0.9335 3.5097 16 1 2.8077 -1.8062 3.3544 17 6 1.8936 -0.5143 4.7986 18 7 1.1422 0.5475 4.9875 19 14 2.5616 -1.4589 6.2652 20 1 4.0459 -1.4574 6.2206 21 1 2.1039 -0.8116 7.5209 22 1 2.0663 -2.8581 6.2200 23 1 -0.3634 0.5138 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3634 -1.0277 -0.0005 26 1 1.2186 1.8090 -1.4425 27 1 1.4065 3.1386 -3.5054 28 1 3.1987 -0.1858 -5.4914 29 1 3.0221 -1.5174 -3.4288 30 1 0.9348 0.8408 5.8885 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000758702779.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:00 Heat of formation + Delta-G solvation = -97.507897 kcal Electronic energy + Delta-G solvation = -17691.290168 eV Core-core repulsion = 14478.537969 eV Total energy + Delta-G solvation = -3212.752199 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.45970 -39.04226 -37.69279 -36.30051 -35.11776 -32.42301 -31.91787 -30.97171 -29.48666 -25.77751 -24.28949 -23.12752 -22.25771 -20.10529 -18.43257 -17.78037 -16.89033 -16.55850 -15.79935 -15.51674 -14.86139 -14.57898 -14.37382 -14.30945 -13.70845 -13.37623 -13.30639 -12.72613 -12.38242 -12.05552 -11.95108 -11.70514 -11.54170 -11.26121 -11.16528 -10.79246 -10.71160 -10.51368 -10.41412 -9.91556 -9.26084 -9.06690 -8.65930 -8.17541 -6.49903 -4.18429 1.08730 1.12728 2.04144 2.85178 3.05949 3.16205 3.21946 3.37448 3.51540 3.95824 4.42862 4.62715 4.68589 4.92820 4.99649 5.10576 5.22748 5.25702 5.36855 5.71076 5.75846 5.78039 5.99145 6.09582 6.15747 6.32909 6.41063 6.58381 7.29909 7.39128 7.84984 8.58352 8.98514 9.70520 10.67557 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.050150 B = 0.003470 C = 0.003371 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 558.196027 B = 8066.124918 C = 8305.365684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.102 3.898 3 H 0.100 0.900 4 O -0.282 6.282 5 C 0.148 3.852 6 C -0.202 4.202 7 C -0.067 4.067 8 C -0.080 4.080 9 Cl -0.080 7.080 10 C -0.070 4.070 11 C -0.141 4.141 12 C 0.399 3.601 13 O -0.534 6.534 14 O -0.206 6.206 15 C -0.384 4.384 16 H 0.097 0.903 17 C 0.045 3.955 18 N -0.864 5.864 19 Si 0.946 3.054 20 H -0.269 1.269 21 H -0.278 1.278 22 H -0.269 1.269 23 H 0.093 0.907 24 H 0.067 0.933 25 H 0.071 0.929 26 H 0.143 0.857 27 H 0.135 0.865 28 H 0.138 0.862 29 H 0.142 0.858 30 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.717 3.915 -16.112 16.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.045 3.955 3 H 0.117 0.883 4 O -0.195 6.195 5 C 0.101 3.899 6 C -0.221 4.221 7 C -0.086 4.086 8 C -0.107 4.107 9 Cl -0.051 7.051 10 C -0.089 4.089 11 C -0.160 4.160 12 C 0.244 3.756 13 O -0.430 6.430 14 O -0.113 6.113 15 C -0.460 4.460 16 H 0.115 0.885 17 C -0.160 4.160 18 N -0.500 5.500 19 Si 0.770 3.230 20 H -0.194 1.194 21 H -0.203 1.203 22 H -0.194 1.194 23 H 0.112 0.888 24 H 0.086 0.914 25 H 0.090 0.910 26 H 0.161 0.839 27 H 0.153 0.847 28 H 0.156 0.844 29 H 0.160 0.840 30 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -0.580 3.665 -16.013 16.437 hybrid contribution 0.245 -0.105 0.638 0.692 sum -0.335 3.559 -15.375 15.785 Atomic orbital electron populations 1.22299 0.92365 1.04282 1.03898 1.21586 0.95637 0.96200 0.82076 0.88267 1.86208 1.80382 1.37160 1.15712 1.19202 0.93456 0.90190 0.87048 1.21391 1.06568 0.94265 0.99896 1.20820 0.96988 1.00073 0.90695 1.20741 1.07744 0.93472 0.88749 1.98349 1.97108 1.72920 1.36741 1.20818 0.98132 0.91860 0.98079 1.20424 1.03444 1.01701 0.90445 1.22417 0.82412 0.85193 0.85580 1.90598 1.38263 1.26957 1.87159 1.83837 1.63627 1.51779 1.12071 1.21218 1.32064 1.11224 0.81520 0.88530 1.25339 0.96239 0.96530 0.97873 1.69969 1.34366 1.22730 1.22956 0.85702 0.79325 0.79173 0.78761 1.19381 1.20288 1.19370 0.88840 0.91432 0.90961 0.83914 0.84698 0.84412 0.84042 0.91863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.65 9.10 37.15 0.34 -2.31 16 2 C 0.10 1.88 2.75 -27.89 -0.08 1.80 16 3 H 0.10 1.60 6.32 -51.93 -0.33 1.28 16 4 O -0.28 -5.10 9.33 -39.41 -0.37 -5.47 16 5 C 0.15 2.16 6.60 -39.22 -0.26 1.90 16 6 C -0.20 -2.54 8.24 -39.44 -0.32 -2.87 16 7 C -0.07 -0.75 9.82 -39.57 -0.39 -1.13 16 8 C -0.08 -0.90 6.32 -39.49 -0.25 -1.15 16 9 Cl -0.08 -0.81 28.95 -51.86 -1.50 -2.31 16 10 C -0.07 -0.77 9.82 -39.57 -0.39 -1.15 16 11 C -0.14 -1.79 9.99 -39.44 -0.39 -2.19 16 12 C 0.40 9.84 7.28 36.01 0.26 10.10 16 13 O -0.53 -14.75 15.74 -25.78 -0.41 -15.15 16 14 O -0.21 -5.70 9.65 -20.73 -0.20 -5.90 16 15 C -0.38 -11.15 9.65 30.92 0.30 -10.85 16 16 H 0.10 2.83 6.86 -52.49 -0.36 2.47 16 17 C 0.04 1.23 5.49 -17.53 -0.10 1.13 16 18 N -0.86 -24.50 13.67 55.48 0.76 -23.74 16 19 Si 0.95 20.86 29.55 -169.99 -5.02 15.84 16 20 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 21 H -0.28 -5.86 7.11 56.52 0.40 -5.46 16 22 H -0.27 -5.81 7.11 56.52 0.40 -5.40 16 23 H 0.09 1.50 8.11 -51.93 -0.42 1.08 16 24 H 0.07 0.83 6.90 -51.93 -0.36 0.48 16 25 H 0.07 1.16 8.14 -51.93 -0.42 0.73 16 26 H 0.14 1.64 5.42 -52.49 -0.28 1.36 16 27 H 0.14 1.22 8.06 -52.49 -0.42 0.80 16 28 H 0.14 1.18 8.06 -52.49 -0.42 0.75 16 29 H 0.14 1.65 8.06 -52.49 -0.42 1.23 16 30 H 0.27 7.07 8.31 -40.82 -0.34 6.73 16 LS Contribution 287.50 15.07 4.33 4.33 Total: -1.00 -32.22 287.50 -6.26 -38.48 By element: Atomic # 1 Polarization: 3.21 SS G_CDS: -2.58 Total: 0.63 kcal Atomic # 6 Polarization: -5.44 SS G_CDS: -1.28 Total: -6.72 kcal Atomic # 7 Polarization: -24.50 SS G_CDS: 0.76 Total: -23.74 kcal Atomic # 8 Polarization: -25.55 SS G_CDS: -0.97 Total: -26.52 kcal Atomic # 14 Polarization: 20.86 SS G_CDS: -5.02 Total: 15.84 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.50 Total: -2.31 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -32.22 -6.26 -38.48 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000758702779.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.023 kcal (2) G-P(sol) polarization free energy of solvation -32.221 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.244 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.508 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds