Wall clock time and date at job start Mon Mar 30 2020 00:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38195 * 119.55039 * 2 1 4 4 C 1.38602 * 119.24783 * 179.73735 * 3 2 1 5 5 C 1.39053 * 118.38765 * 0.52516 * 4 3 2 6 6 O 1.35933 * 120.47674 * 179.75673 * 5 4 3 7 7 C 1.42902 * 116.99897 * 359.97438 * 6 5 4 8 8 C 1.50700 * 109.46977 * 180.02562 * 7 6 5 9 9 O 1.21298 * 119.99756 * 359.97438 * 8 7 6 10 10 N 1.34770 * 120.00134 * 180.02562 * 8 7 6 11 11 C 1.37097 * 120.00169 * 180.02562 * 10 8 7 12 12 H 1.07999 * 120.00422 * 359.97438 * 11 10 8 13 13 C 1.38953 * 120.00337 * 179.97438 * 11 10 8 14 14 N 1.31407 * 120.00367 * 179.97438 * 13 11 10 15 15 Si 1.86803 * 119.99484 * 359.97438 * 13 11 10 16 16 H 1.48493 * 109.47241 * 90.00297 * 15 13 11 17 17 H 1.48509 * 109.47007 * 209.99926 * 15 13 11 18 18 H 1.48501 * 109.47588 * 329.99840 * 15 13 11 19 19 C 1.38863 * 119.04354 * 359.73631 * 5 4 3 20 20 Cl 1.73599 * 119.67048 * 180.02562 * 19 5 4 21 21 N 1.31888 * 119.54764 * 180.27145 * 2 1 3 22 22 H 1.09001 * 109.46953 * 269.72669 * 1 2 3 23 23 H 1.09000 * 109.47318 * 29.72266 * 1 2 3 24 24 H 1.09000 * 109.47161 * 149.72897 * 1 2 3 25 25 H 1.08006 * 120.37843 * 0.02562 * 3 2 1 26 26 H 1.07997 * 120.80394 * 180.23993 * 4 3 2 27 27 H 1.09004 * 109.47098 * 299.99662 * 7 6 5 28 28 H 1.09001 * 109.47112 * 60.00232 * 7 6 5 29 29 H 0.97006 * 120.00001 * 359.97438 * 10 8 7 30 30 H 0.96999 * 120.00205 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1886 1.2022 0.0000 4 6 3.5746 1.1949 0.0055 5 6 4.2293 -0.0319 -0.0003 6 8 5.5874 -0.0886 -0.0002 7 6 6.2887 1.1565 0.0056 8 6 7.7732 0.8969 0.0042 9 8 8.1896 -0.2423 -0.0007 10 7 8.6380 1.9305 0.0094 11 6 9.9885 1.6944 0.0076 12 1 10.3594 0.6801 0.0024 13 6 10.8802 2.7600 0.0125 14 7 12.1747 2.5337 0.0113 15 14 10.2388 4.5144 0.0208 16 1 10.0690 4.9728 1.4230 17 1 11.2076 5.3990 -0.6752 18 1 8.9300 4.5664 -0.6789 19 6 3.4756 -1.1982 -0.0058 20 17 4.2761 -2.7386 -0.0124 21 7 2.1575 -1.1473 -0.0054 22 1 -0.3633 -0.0049 1.0277 23 1 -0.3634 0.8924 -0.5095 24 1 -0.3633 -0.8875 -0.5180 25 1 1.6474 2.1369 0.0004 26 1 4.1325 2.1196 0.0096 27 1 6.0196 1.7292 -0.8820 28 1 6.0191 1.7213 0.8980 29 1 8.3050 2.8416 0.0137 30 1 12.7971 3.2776 0.0143 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000777553097.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:11 Heat of formation + Delta-G solvation = -39.581479 kcal Electronic energy + Delta-G solvation = -17528.941771 eV Core-core repulsion = 14350.994202 eV Total energy + Delta-G solvation = -3177.947570 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.87509 -38.99393 -37.66797 -36.52995 -34.13057 -32.45061 -32.33624 -31.83610 -29.06921 -26.89854 -24.64580 -23.75396 -22.20911 -19.66838 -18.65581 -18.41565 -17.30287 -16.38575 -16.27512 -15.65085 -15.05375 -14.82423 -14.58405 -14.26307 -13.65883 -13.55740 -13.05822 -12.84664 -12.75411 -12.43945 -12.25447 -11.83723 -11.54512 -11.36560 -11.11908 -11.11251 -10.70381 -10.08880 -9.90782 -9.88623 -9.71808 -8.70577 -8.34863 -8.32360 -6.42273 -3.95467 0.74291 0.95066 1.87491 2.81763 2.92276 2.97850 3.07899 3.37103 3.50025 3.99420 4.17637 4.33312 4.49673 4.54562 4.78813 4.96734 5.03718 5.07255 5.29473 5.33348 5.38640 5.57106 5.64986 5.67503 5.73159 6.13004 7.02239 7.43111 7.56480 7.97263 8.44187 8.80820 9.25926 9.61679 10.70139 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.030247 B = 0.004255 C = 0.003740 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 925.476817 B = 6579.085241 C = 7484.115213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.094 3.906 3 C -0.126 4.126 4 C -0.157 4.157 5 C 0.101 3.899 6 O -0.262 6.262 7 C 0.044 3.956 8 C 0.448 3.552 9 O -0.550 6.550 10 N -0.579 5.579 11 C -0.309 4.309 12 H 0.123 0.877 13 C 0.045 3.955 14 N -0.874 5.874 15 Si 0.880 3.120 16 H -0.269 1.269 17 H -0.274 1.274 18 H -0.269 1.269 19 C 0.148 3.852 20 Cl -0.011 7.011 21 N -0.442 5.442 22 H 0.077 0.923 23 H 0.075 0.925 24 H 0.077 0.923 25 H 0.144 0.856 26 H 0.151 0.849 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.372 0.628 30 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.060 2.345 0.029 22.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.044 4.044 3 C -0.146 4.146 4 C -0.184 4.184 5 C 0.050 3.950 6 O -0.172 6.172 7 C -0.035 4.035 8 C 0.233 3.767 9 O -0.431 6.431 10 N -0.220 5.220 11 C -0.437 4.437 12 H 0.140 0.860 13 C -0.159 4.159 14 N -0.513 5.513 15 Si 0.706 3.294 16 H -0.194 1.194 17 H -0.199 1.199 18 H -0.195 1.195 19 C -0.018 4.018 20 Cl 0.018 6.982 21 N -0.155 5.155 22 H 0.096 0.904 23 H 0.094 0.906 24 H 0.096 0.904 25 H 0.162 0.838 26 H 0.169 0.831 27 H 0.100 0.900 28 H 0.100 0.900 29 H 0.205 0.795 30 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -21.776 0.560 0.020 21.784 hybrid contribution 0.237 2.415 0.002 2.426 sum -21.540 2.974 0.021 21.744 Atomic orbital electron populations 1.20640 0.88040 1.03541 1.03145 1.21047 0.97050 0.87129 0.99141 1.21861 0.93725 0.99511 0.99490 1.21773 0.95576 0.97113 1.03902 1.19705 0.84921 0.93254 0.97094 1.86342 1.12741 1.31345 1.86778 1.22661 0.93462 0.84930 1.02461 1.19067 0.85548 0.86357 0.85726 1.90640 1.78259 1.21191 1.52962 1.42009 1.06959 1.06221 1.66785 1.19433 0.78103 0.97465 1.48681 0.85986 1.25039 0.95100 0.98442 0.97318 1.69609 1.00920 1.32511 1.48299 0.86673 0.79023 0.84693 0.79010 1.19428 1.19936 1.19484 1.20892 0.88673 0.87034 1.05184 1.98430 1.76659 1.26728 1.96413 1.66909 1.06565 1.30180 1.11810 0.90442 0.90576 0.90407 0.83849 0.83135 0.89998 0.89983 0.79521 0.91354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.67 10.17 36.01 0.37 -0.31 16 2 C 0.09 1.01 6.78 -82.58 -0.56 0.45 16 3 C -0.13 -1.18 9.73 -39.46 -0.38 -1.56 16 4 C -0.16 -1.75 9.14 -39.14 -0.36 -2.11 16 5 C 0.10 1.50 6.70 -39.05 -0.26 1.24 16 6 O -0.26 -4.66 9.14 -39.44 -0.36 -5.02 16 7 C 0.04 0.71 5.24 36.01 0.19 0.89 16 8 C 0.45 10.05 7.86 -10.99 -0.09 9.97 16 9 O -0.55 -15.09 16.08 -14.37 -0.23 -15.32 16 10 N -0.58 -13.24 5.09 -10.96 -0.06 -13.29 16 11 C -0.31 -8.49 10.16 -14.93 -0.15 -8.64 16 12 H 0.12 3.87 7.39 -52.49 -0.39 3.48 16 13 C 0.05 1.19 5.50 -17.47 -0.10 1.10 16 14 N -0.87 -24.85 13.96 55.50 0.77 -24.08 16 15 Si 0.88 18.40 27.74 -169.99 -4.71 13.68 16 16 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 17 H -0.27 -5.78 7.11 56.52 0.40 -5.38 16 18 H -0.27 -5.02 6.52 56.52 0.37 -4.66 16 19 C 0.15 2.27 7.29 -17.28 -0.13 2.15 16 20 Cl -0.01 -0.17 28.66 -51.86 -1.49 -1.66 16 21 N -0.44 -6.14 10.25 -6.50 -0.07 -6.21 16 22 H 0.08 0.47 8.14 -51.93 -0.42 0.04 16 23 H 0.08 0.36 8.07 -51.93 -0.42 -0.06 16 24 H 0.08 0.57 8.14 -51.93 -0.42 0.14 16 25 H 0.14 0.83 8.06 -52.48 -0.42 0.41 16 26 H 0.15 1.29 6.45 -52.49 -0.34 0.95 16 27 H 0.08 1.05 7.70 -51.93 -0.40 0.65 16 28 H 0.08 1.04 7.70 -51.93 -0.40 0.64 16 29 H 0.37 7.19 5.76 -40.82 -0.24 6.95 16 30 H 0.28 7.20 8.31 -40.82 -0.34 6.86 16 LS Contribution 285.92 15.07 4.31 4.31 Total: -1.00 -33.55 285.92 -5.92 -39.47 By element: Atomic # 1 Polarization: 7.57 SS G_CDS: -2.62 Total: 4.95 kcal Atomic # 6 Polarization: 4.64 SS G_CDS: -1.47 Total: 3.17 kcal Atomic # 7 Polarization: -44.23 SS G_CDS: 0.65 Total: -43.58 kcal Atomic # 8 Polarization: -19.75 SS G_CDS: -0.59 Total: -20.34 kcal Atomic # 14 Polarization: 18.40 SS G_CDS: -4.71 Total: 13.68 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.49 Total: -1.66 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -33.55 -5.92 -39.47 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000777553097.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.113 kcal (2) G-P(sol) polarization free energy of solvation -33.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds