Wall clock time and date at job start Mon Mar 30 2020 00:46:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42898 * 109.47563 * 2 1 4 4 C 1.35645 * 116.99803 * 179.97438 * 3 2 1 5 5 C 1.38619 * 120.15138 * 0.02629 * 4 3 2 6 6 C 1.38219 * 120.08028 * 180.02562 * 5 4 3 7 7 Cl 1.73604 * 119.80852 * 179.97438 * 6 5 4 8 8 C 1.38720 * 120.38218 * 359.97438 * 6 5 4 9 9 C 1.37693 * 120.29486 * 359.95155 * 8 6 5 10 10 C 1.39833 * 119.91450 * 0.07111 * 9 8 6 11 11 C 1.47291 * 120.18900 * 180.22439 * 10 9 8 12 12 O 1.21549 * 119.99997 * 179.72380 * 11 10 9 13 13 O 1.34789 * 119.99922 * 359.72716 * 11 10 9 14 14 C 1.34865 * 116.99950 * 179.97438 * 13 11 10 15 15 H 1.08000 * 119.99641 * 359.97438 * 14 13 11 16 16 C 1.38785 * 119.99858 * 180.02562 * 14 13 11 17 17 N 1.31431 * 120.00243 * 0.02562 * 16 14 13 18 18 Si 1.86797 * 119.99990 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.47423 * 89.99901 * 18 16 14 20 20 H 1.48508 * 109.47258 * 209.99747 * 18 16 14 21 21 H 1.48505 * 109.47120 * 329.99597 * 18 16 14 22 22 H 1.08998 * 109.46852 * 299.99902 * 1 2 3 23 23 H 1.09009 * 109.47033 * 59.99472 * 1 2 3 24 24 H 1.08998 * 109.47550 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.46852 * 240.00098 * 2 1 3 26 26 H 1.08996 * 109.46769 * 120.00622 * 2 1 3 27 27 H 1.07999 * 119.96064 * 359.97438 * 5 4 3 28 28 H 1.07995 * 119.85446 * 180.02562 * 8 6 5 29 29 H 1.08004 * 120.04413 * 180.02562 * 9 8 6 30 30 H 0.97002 * 120.00464 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.3512 1.5248 0.0005 5 6 4.1984 0.4276 0.0005 6 6 5.5685 0.6103 0.0016 7 17 6.6229 -0.7688 0.0022 8 6 6.1058 1.8892 0.0022 9 6 5.2787 2.9901 0.0007 10 6 3.8908 2.8196 0.0001 11 6 3.0005 3.9929 -0.0065 12 8 1.7946 3.8408 -0.0121 13 8 3.5230 5.2354 -0.0064 14 6 2.6527 6.2657 -0.0132 15 1 1.5898 6.0745 -0.0187 16 6 3.1231 7.5714 -0.0140 17 7 4.4166 7.8039 -0.0087 18 14 1.9176 8.9983 -0.0226 19 1 1.5919 9.3796 1.3751 20 1 2.5276 10.1574 -0.7225 21 1 0.6751 8.5924 -0.7274 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5140 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 1.8933 -0.5138 -0.8900 26 1 1.8933 -0.5139 0.8899 27 1 3.7874 -0.5711 0.0005 28 1 7.1775 2.0220 0.0026 29 1 5.7014 3.9839 0.0007 30 1 4.7454 8.7165 -0.0089 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000778891308.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:18 Heat of formation + Delta-G solvation = -100.484996 kcal Electronic energy + Delta-G solvation = -17994.140729 eV Core-core repulsion = 14781.259433 eV Total energy + Delta-G solvation = -3212.881296 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.22472 -38.58507 -37.56213 -36.26368 -35.01321 -32.18240 -31.83684 -30.87146 -29.47674 -25.59731 -24.05373 -23.29218 -21.62185 -20.30892 -18.21653 -17.70318 -16.89375 -16.04936 -16.02600 -15.15151 -14.91280 -14.45906 -14.29939 -14.04267 -13.46489 -13.44464 -12.71453 -12.61120 -12.58932 -12.01939 -11.72944 -11.58488 -11.43019 -11.12884 -11.04100 -10.96393 -10.55195 -10.43759 -10.36995 -9.82546 -8.95507 -8.78263 -8.58222 -8.09191 -6.44363 -4.06040 0.93688 1.47776 2.04871 3.11620 3.19079 3.25132 3.29124 3.35494 3.91386 4.24112 4.48466 4.82960 4.93596 4.98699 5.09774 5.16241 5.22349 5.24707 5.50458 5.65665 5.79299 5.83724 5.93716 6.13262 6.24280 6.45175 6.77741 6.86818 7.37615 7.55562 7.94583 8.75015 9.04932 9.86571 10.73698 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.020261 B = 0.005389 C = 0.004270 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1381.630148 B = 5194.685728 C = 6555.861749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.046 3.954 3 O -0.270 6.270 4 C 0.188 3.812 5 C -0.220 4.220 6 C 0.018 3.982 7 Cl -0.075 7.075 8 C -0.161 4.161 9 C -0.022 4.022 10 C -0.119 4.119 11 C 0.435 3.565 12 O -0.531 6.531 13 O -0.210 6.210 14 C -0.370 4.370 15 H 0.097 0.903 16 C 0.040 3.960 17 N -0.861 5.861 18 Si 0.944 3.056 19 H -0.273 1.273 20 H -0.278 1.278 21 H -0.266 1.266 22 H 0.068 0.932 23 H 0.068 0.932 24 H 0.074 0.926 25 H 0.060 0.940 26 H 0.060 0.940 27 H 0.140 0.860 28 H 0.138 0.862 29 H 0.158 0.842 30 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.381 -15.027 0.024 15.090 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.029 4.029 3 O -0.181 6.181 4 C 0.140 3.860 5 C -0.239 4.239 6 C -0.009 4.009 7 Cl -0.046 7.046 8 C -0.180 4.180 9 C -0.040 4.040 10 C -0.121 4.121 11 C 0.283 3.717 12 O -0.428 6.428 13 O -0.118 6.118 14 C -0.446 4.446 15 H 0.115 0.885 16 C -0.164 4.164 17 N -0.498 5.498 18 Si 0.769 3.231 19 H -0.198 1.198 20 H -0.203 1.203 21 H -0.190 1.190 22 H 0.087 0.913 23 H 0.087 0.913 24 H 0.093 0.907 25 H 0.078 0.922 26 H 0.078 0.922 27 H 0.158 0.842 28 H 0.156 0.844 29 H 0.176 0.824 30 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 1.126 -14.841 0.016 14.883 hybrid contribution -0.265 0.255 0.006 0.368 sum 0.861 -14.585 0.022 14.611 Atomic orbital electron populations 1.21724 0.92559 1.02199 1.04152 1.22880 0.96474 0.82573 1.01016 1.86471 1.17241 1.27860 1.86558 1.18788 0.83111 0.91875 0.92260 1.20883 0.91962 0.98711 1.12387 1.20753 0.90241 0.88229 1.01713 1.98354 1.66213 1.43251 1.96777 1.20898 1.00903 0.89920 1.06276 1.21476 0.90969 1.00003 0.91581 1.18979 0.93404 0.89927 1.09769 1.20354 0.86819 0.84172 0.80403 1.90687 1.15551 1.86498 1.50078 1.83892 1.39738 1.12556 1.75567 1.21288 0.89948 0.82331 1.51078 0.88518 1.25349 0.96995 0.97719 0.96327 1.69974 1.12342 1.21504 1.46015 0.85655 0.79475 0.79219 0.78772 1.19848 1.20305 1.19034 0.91281 0.91280 0.90743 0.92153 0.92153 0.84250 0.84420 0.82410 0.91979 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.67 10.28 37.16 0.38 -1.29 16 2 C 0.05 0.58 5.46 37.16 0.20 0.79 16 3 O -0.27 -5.00 8.21 -40.53 -0.33 -5.34 16 4 C 0.19 3.42 6.70 -38.68 -0.26 3.16 16 5 C -0.22 -3.21 8.80 -39.45 -0.35 -3.56 16 6 C 0.02 0.25 6.32 -39.41 -0.25 0.00 16 7 Cl -0.07 -0.88 28.94 -51.86 -1.50 -2.39 16 8 C -0.16 -2.36 9.80 -39.60 -0.39 -2.75 16 9 C -0.02 -0.39 9.61 -39.18 -0.38 -0.76 16 10 C -0.12 -2.48 5.89 -104.85 -0.62 -3.09 16 11 C 0.44 11.34 7.82 34.41 0.27 11.61 16 12 O -0.53 -14.93 14.41 -26.63 -0.38 -15.31 16 13 O -0.21 -6.03 8.99 -21.83 -0.20 -6.22 16 14 C -0.37 -10.95 9.65 30.93 0.30 -10.66 16 15 H 0.10 2.89 6.86 -52.49 -0.36 2.53 16 16 C 0.04 1.12 5.49 -17.52 -0.10 1.03 16 17 N -0.86 -24.80 13.67 55.49 0.76 -24.04 16 18 Si 0.94 21.17 29.55 -169.99 -5.02 16.15 16 19 H -0.27 -5.95 7.11 56.52 0.40 -5.55 16 20 H -0.28 -5.98 7.11 56.52 0.40 -5.58 16 21 H -0.27 -5.88 7.11 56.52 0.40 -5.48 16 22 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 23 H 0.07 0.83 8.14 -51.92 -0.42 0.41 16 24 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 25 H 0.06 0.66 7.66 -51.93 -0.40 0.26 16 26 H 0.06 0.65 7.66 -51.93 -0.40 0.26 16 27 H 0.14 1.65 6.30 -52.49 -0.33 1.32 16 28 H 0.14 1.67 8.06 -52.49 -0.42 1.25 16 29 H 0.16 2.90 7.61 -52.48 -0.40 2.50 16 30 H 0.27 7.13 8.31 -40.82 -0.34 6.79 16 LS Contribution 287.80 15.07 4.34 4.34 Total: -1.00 -32.82 287.80 -6.23 -39.05 By element: Atomic # 1 Polarization: 1.99 SS G_CDS: -2.71 Total: -0.73 kcal Atomic # 6 Polarization: -4.34 SS G_CDS: -1.18 Total: -5.52 kcal Atomic # 7 Polarization: -24.80 SS G_CDS: 0.76 Total: -24.04 kcal Atomic # 8 Polarization: -25.96 SS G_CDS: -0.91 Total: -26.87 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -5.02 Total: 16.15 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.50 Total: -2.39 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -32.82 -6.23 -39.05 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000778891308.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.432 kcal (2) G-P(sol) polarization free energy of solvation -32.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.053 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds