Wall clock time and date at job start Mon Mar 30 2020 00:46:18
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
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* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= -1
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.53000 * 1
3 3 O 1.42898 * 109.47563 * 2 1
4 4 C 1.35645 * 116.99803 * 179.97438 * 3 2 1
5 5 C 1.38619 * 120.15138 * 0.02629 * 4 3 2
6 6 C 1.38219 * 120.08028 * 180.02562 * 5 4 3
7 7 Cl 1.73604 * 119.80852 * 179.97438 * 6 5 4
8 8 C 1.38720 * 120.38218 * 359.97438 * 6 5 4
9 9 C 1.37693 * 120.29486 * 359.95155 * 8 6 5
10 10 C 1.39833 * 119.91450 * 0.07111 * 9 8 6
11 11 C 1.47291 * 120.18900 * 180.22439 * 10 9 8
12 12 O 1.21549 * 119.99997 * 179.72380 * 11 10 9
13 13 O 1.34789 * 119.99922 * 359.72716 * 11 10 9
14 14 C 1.34865 * 116.99950 * 179.97438 * 13 11 10
15 15 H 1.08000 * 119.99641 * 359.97438 * 14 13 11
16 16 C 1.38785 * 119.99858 * 180.02562 * 14 13 11
17 17 N 1.31431 * 120.00243 * 0.02562 * 16 14 13
18 18 Si 1.86797 * 119.99990 * 180.02562 * 16 14 13
19 19 H 1.48498 * 109.47423 * 89.99901 * 18 16 14
20 20 H 1.48508 * 109.47258 * 209.99747 * 18 16 14
21 21 H 1.48505 * 109.47120 * 329.99597 * 18 16 14
22 22 H 1.08998 * 109.46852 * 299.99902 * 1 2 3
23 23 H 1.09009 * 109.47033 * 59.99472 * 1 2 3
24 24 H 1.08998 * 109.47550 * 179.97438 * 1 2 3
25 25 H 1.08998 * 109.46852 * 240.00098 * 2 1 3
26 26 H 1.08996 * 109.46769 * 120.00622 * 2 1 3
27 27 H 1.07999 * 119.96064 * 359.97438 * 5 4 3
28 28 H 1.07995 * 119.85446 * 180.02562 * 8 6 5
29 29 H 1.08004 * 120.04413 * 180.02562 * 9 8 6
30 30 H 0.97002 * 120.00464 * 180.02562 * 17 16 14
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5300 0.0000 0.0000
3 8 2.0064 1.3472 0.0000
4 6 3.3512 1.5248 0.0005
5 6 4.1984 0.4276 0.0005
6 6 5.5685 0.6103 0.0016
7 17 6.6229 -0.7688 0.0022
8 6 6.1058 1.8892 0.0022
9 6 5.2787 2.9901 0.0007
10 6 3.8908 2.8196 0.0001
11 6 3.0005 3.9929 -0.0065
12 8 1.7946 3.8408 -0.0121
13 8 3.5230 5.2354 -0.0064
14 6 2.6527 6.2657 -0.0132
15 1 1.5898 6.0745 -0.0187
16 6 3.1231 7.5714 -0.0140
17 7 4.4166 7.8039 -0.0087
18 14 1.9176 8.9983 -0.0226
19 1 1.5919 9.3796 1.3751
20 1 2.5276 10.1574 -0.7225
21 1 0.6751 8.5924 -0.7274
22 1 -0.3633 0.5138 0.8900
23 1 -0.3633 0.5140 -0.8900
24 1 -0.3634 -1.0276 -0.0005
25 1 1.8933 -0.5138 -0.8900
26 1 1.8933 -0.5139 0.8899
27 1 3.7874 -0.5711 0.0005
28 1 7.1775 2.0220 0.0026
29 1 5.7014 3.9839 0.0007
30 1 4.7454 8.7165 -0.0089
RHF calculation, no. of doubly occupied orbitals= 46
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
ZINC000778891308.mol2 30
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Mon Mar 30 2020 00:46:18
Heat of formation + Delta-G solvation = -120.275433 kcal
Electronic energy + Delta-G solvation = -17994.998906 eV
Core-core repulsion = 14781.259433 eV
Total energy + Delta-G solvation = -3213.739473 eV
No. of doubly occupied orbitals = 46
Molecular weight
(most abundant/longest-lived isotopes) = 270.049 amu
Computer time = 0.26 seconds
Orbital eigenvalues (eV)
-41.68431 -40.47340 -38.81565 -37.46055 -37.07932 -34.31110 -32.91722 -32.24531
-30.76344 -27.66662 -25.28332 -24.81974 -22.80628 -22.01841 -19.85007 -19.58693
-18.61876 -17.38622 -17.23776 -16.85352 -16.42360 -16.35622 -16.10128 -15.52416
-14.71842 -14.67345 -14.45133 -13.70070 -13.67269 -13.47907 -13.28499 -13.18966
-12.94580 -12.49979 -12.26513 -12.17665 -12.15897 -12.06421 -11.97992 -11.61635
-11.00785 -10.69259 -10.07952 -9.41974 -8.55192 -6.31403 -0.46685 0.19295
0.88768 1.34274 1.36301 1.51621 1.71274 2.09172 2.13273 2.57295
2.69714 3.02816 3.61054 3.84994 3.93627 4.02720 4.08599 4.18180
4.32370 4.43764 4.56014 4.82649 4.90634 4.93066 5.05691 5.12561
5.19689 5.25269 5.46025 5.82606 6.32321 6.64876 6.89821 7.76063
8.65645
Molecular weight = 270.05amu
Principal moments of inertia in cm(-1)
A = 0.020261 B = 0.005389 C = 0.004270
Principal moments of inertia in units of 10**(-40)*gram-cm**2
A = 1381.630148 B = 5194.685728 C = 6555.861749
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.148 4.148
2 C 0.033 3.967
3 O -0.309 6.309
4 C 0.187 3.813
5 C -0.205 4.205
6 C 0.033 3.967
7 Cl -0.039 7.039
8 C -0.151 4.151
9 C -0.021 4.021
10 C -0.166 4.166
11 C 0.435 3.565
12 O -0.562 6.562
13 O -0.235 6.235
14 C -0.418 4.418
15 H 0.079 0.921
16 C -0.002 4.002
17 N -0.898 5.898
18 Si 1.018 2.982
19 H -0.260 1.260
20 H -0.257 1.257
21 H -0.265 1.265
22 H 0.052 0.948
23 H 0.052 0.948
24 H 0.114 0.886
25 H 0.084 0.916
26 H 0.084 0.916
27 H 0.175 0.825
28 H 0.169 0.831
29 H 0.142 0.858
30 H 0.280 0.720
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 2.246 -17.232 0.044 17.378
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.205 4.205
2 C -0.041 4.041
3 O -0.221 6.221
4 C 0.139 3.861
5 C -0.224 4.224
6 C 0.005 3.995
7 Cl -0.010 7.010
8 C -0.170 4.170
9 C -0.040 4.040
10 C -0.168 4.168
11 C 0.284 3.716
12 O -0.460 6.460
13 O -0.144 6.144
14 C -0.493 4.493
15 H 0.097 0.903
16 C -0.202 4.202
17 N -0.535 5.535
18 Si 0.836 3.164
19 H -0.184 1.184
20 H -0.181 1.181
21 H -0.190 1.190
22 H 0.071 0.929
23 H 0.071 0.929
24 H 0.132 0.868
25 H 0.102 0.898
26 H 0.102 0.898
27 H 0.193 0.807
28 H 0.187 0.813
29 H 0.160 0.840
30 H 0.090 0.910
Dipole moment (debyes) X Y Z Total
from point charges 2.012 -17.083 0.039 17.202
hybrid contribution -0.450 0.612 0.000 0.760
sum 1.562 -16.471 0.039 16.545
Atomic orbital electron populations
1.21791 0.91902 1.04231 1.02585 1.23328 0.97140 0.80407 1.03217
1.86436 1.17578 1.31638 1.86435 1.18883 0.83762 0.91660 0.91836
1.21147 0.91733 0.98981 1.10571 1.20915 0.90658 0.89140 0.98744
1.98381 1.65052 1.41194 1.96372 1.21112 1.01923 0.89116 1.04823
1.21348 0.90135 1.00666 0.91831 1.18890 0.93950 0.89047 1.14927
1.21401 0.87455 0.84752 0.77994 1.90628 1.17226 1.87002 1.51171
1.83916 1.40023 1.13504 1.76977 1.21440 0.89590 0.83723 1.54587
0.90289 1.26519 0.99242 0.99807 0.94673 1.70050 1.14172 1.22842
1.46433 0.84629 0.76770 0.75402 0.79560 1.18415 1.18132 1.18957
0.92852 0.92873 0.86807 0.89791 0.89775 0.80749 0.81336 0.84002
0.91046
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.15 -3.15 10.28 71.98 0.74 -2.41 16
2 C 0.03 0.77 5.46 71.98 0.39 1.16 16
3 O -0.31 -11.51 8.21 -68.66 -0.56 -12.07 16
4 C 0.19 6.75 6.70 22.86 0.15 6.90 16
5 C -0.21 -5.38 8.80 22.36 0.20 -5.18 16
6 C 0.03 0.80 6.32 22.38 0.14 0.95 16
7 Cl -0.04 -0.75 28.94 -2.72 -0.08 -0.83 16
8 C -0.15 -4.10 9.80 22.26 0.22 -3.88 16
9 C -0.02 -0.77 9.61 22.53 0.22 -0.55 16
10 C -0.17 -7.19 5.89 -20.02 -0.12 -7.31 16
11 C 0.43 24.21 7.82 70.20 0.55 24.76 16
12 O -0.56 -33.73 14.41 26.69 0.38 -33.34 16
13 O -0.24 -14.49 8.99 10.65 0.10 -14.39 16
14 C -0.42 -26.23 9.65 67.95 0.66 -25.57 16
15 H 0.08 5.07 6.86 -2.91 -0.02 5.05 16
16 C 0.00 -0.11 5.49 84.88 0.47 0.36 16
17 N -0.90 -53.23 13.67 21.63 0.30 -52.94 16
18 Si 1.02 44.17 29.55 68.60 2.03 46.20 16
19 H -0.26 -10.64 7.11 99.48 0.71 -9.94 16
20 H -0.26 -10.24 7.11 99.48 0.71 -9.53 16
21 H -0.27 -11.36 7.11 99.48 0.71 -10.65 16
22 H 0.05 1.28 8.14 -2.39 -0.02 1.26 16
23 H 0.05 1.28 8.14 -2.38 -0.02 1.26 16
24 H 0.11 1.48 8.14 -2.39 -0.02 1.46 16
25 H 0.08 1.55 7.66 -2.39 -0.02 1.53 16
26 H 0.08 1.55 7.66 -2.39 -0.02 1.53 16
27 H 0.18 3.29 6.30 -2.91 -0.02 3.27 16
28 H 0.17 3.51 8.06 -2.91 -0.02 3.49 16
29 H 0.14 5.53 7.61 -2.91 -0.02 5.51 16
30 H 0.28 14.98 8.31 -92.71 -0.77 14.21 16
Total: -1.00 -76.63 287.80 6.95 -69.68
By element:
Atomic # 1 Polarization: 7.29 SS G_CDS: 1.17 Total: 8.47 kcal
Atomic # 6 Polarization: -14.39 SS G_CDS: 3.61 Total: -10.77 kcal
Atomic # 7 Polarization: -53.23 SS G_CDS: 0.30 Total: -52.94 kcal
Atomic # 8 Polarization: -59.72 SS G_CDS: -0.08 Total: -59.81 kcal
Atomic # 14 Polarization: 44.17 SS G_CDS: 2.03 Total: 46.20 kcal
Atomic # 17 Polarization: -0.75 SS G_CDS: -0.08 Total: -0.83 kcal
Total: -76.63 6.95 -69.68 kcal
The number of atoms in the molecule is 30
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
ZINC000778891308.mol2 30
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -50.590 kcal
(2) G-P(sol) polarization free energy of solvation -76.630 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.221 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.945 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -69.685 kcal
(6) G-S(sol) free energy of system = (1) + (5) -120.275 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.26 seconds