Wall clock time and date at job start Mon Mar 30 2020 00:59:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38640 * 120.80523 * 2 1 4 4 C 1.38165 * 119.24991 * 180.27439 * 3 2 1 5 5 N 1.31912 * 120.90091 * 359.71746 * 4 3 2 6 6 C 1.31896 * 121.75961 * 0.02562 * 5 4 3 7 7 Cl 1.73602 * 119.67143 * 179.97438 * 6 5 4 8 8 C 1.38906 * 120.65354 * 0.02562 * 6 5 4 9 9 O 1.35933 * 120.47320 * 179.97438 * 8 6 5 10 10 C 1.42905 * 117.00265 * 90.00020 * 9 8 6 11 11 C 1.50703 * 109.47264 * 179.97438 * 10 9 8 12 12 O 1.21289 * 119.99727 * 359.97438 * 11 10 9 13 13 N 1.34775 * 119.99773 * 179.97438 * 11 10 9 14 14 C 1.37091 * 119.99763 * 179.97438 * 13 11 10 15 15 H 1.07998 * 120.00286 * 0.02562 * 14 13 11 16 16 C 1.38956 * 120.00028 * 180.02562 * 14 13 11 17 17 N 1.31411 * 119.99913 * 0.02562 * 16 14 13 18 18 Si 1.86798 * 120.00028 * 180.02562 * 16 14 13 19 19 H 1.48500 * 109.47454 * 59.99812 * 18 16 14 20 20 H 1.48496 * 109.47302 * 179.97438 * 18 16 14 21 21 H 1.48503 * 109.47261 * 299.99805 * 18 16 14 22 22 H 1.09000 * 109.47646 * 270.24479 * 1 2 3 23 23 H 1.08995 * 109.47064 * 30.25159 * 1 2 3 24 24 H 1.09007 * 109.46813 * 150.24988 * 1 2 3 25 25 H 1.07998 * 120.37579 * 359.97286 * 3 2 1 26 26 H 1.07997 * 119.54933 * 179.70488 * 4 3 2 27 27 H 1.09001 * 109.47103 * 300.00113 * 10 9 8 28 28 H 1.09004 * 109.47054 * 59.99617 * 10 9 8 29 29 H 0.96998 * 120.00166 * 0.02562 * 13 11 10 30 30 H 0.96997 * 119.99770 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2170 1.1908 0.0000 4 6 3.5981 1.1533 -0.0058 5 7 4.2446 0.0035 -0.0057 6 6 3.6073 -1.1513 -0.0006 7 17 4.5127 -2.6325 -0.0014 8 6 2.2189 -1.1939 0.0043 9 8 1.5658 -2.3861 0.0090 10 6 1.2585 -2.9526 1.2845 11 6 0.5395 -4.2630 1.0922 12 8 0.3122 -4.6713 -0.0271 13 7 0.1492 -4.9810 2.1638 14 6 -0.5054 -6.1728 1.9889 15 1 -0.7079 -6.5365 0.9923 16 6 -0.9083 -6.9129 3.0937 17 7 -0.6624 -6.4702 4.3063 18 14 -1.7996 -8.5372 2.8553 19 1 -0.9311 -9.4715 2.0951 20 1 -2.1183 -9.1261 4.1807 21 1 -3.0574 -8.3056 2.1006 22 1 -0.3634 0.0044 1.0276 23 1 -0.3633 0.8877 -0.5177 24 1 -0.3633 -0.8923 -0.5100 25 1 1.6964 2.1370 -0.0004 26 1 4.1560 2.0780 -0.0106 27 1 2.1817 -3.1222 1.8387 28 1 0.6207 -2.2670 1.8424 29 1 0.3307 -4.6542 3.0589 30 1 -0.9434 -6.9870 5.0776 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000779811888.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:19 Heat of formation + Delta-G solvation = -46.493218 kcal Electronic energy + Delta-G solvation = -17845.414203 eV Core-core repulsion = 14667.166917 eV Total energy + Delta-G solvation = -3178.247285 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.74647 -38.60741 -37.26692 -36.59310 -34.02626 -33.74448 -31.36599 -30.58303 -28.46712 -27.43779 -24.59394 -23.28105 -22.37221 -19.62060 -18.12781 -17.77259 -17.44857 -16.76268 -16.03388 -15.18619 -14.88258 -14.67393 -14.49029 -14.01362 -13.47274 -13.27745 -13.20828 -12.99294 -12.53558 -12.19818 -11.80988 -11.64049 -11.59499 -11.18526 -11.10119 -10.47955 -10.44893 -10.28078 -9.59926 -9.57941 -9.45544 -8.87634 -8.47401 -8.05920 -6.48389 -3.90032 0.65502 0.87720 1.82598 3.13632 3.16713 3.23633 3.29171 3.62262 3.76611 4.16592 4.29963 4.46917 4.69107 4.78372 4.98545 5.14809 5.16912 5.30549 5.42954 5.48568 5.56328 5.71705 5.89608 6.01489 6.08343 6.22672 7.33756 7.49308 7.55441 7.96423 8.51487 9.09560 9.41974 9.92746 10.68994 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.030352 B = 0.004455 C = 0.004147 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 922.288923 B = 6283.093103 C = 6750.850446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.047 4.047 3 C -0.162 4.162 4 C 0.107 3.893 5 N -0.472 5.472 6 C 0.158 3.842 7 Cl -0.014 7.014 8 C 0.068 3.932 9 O -0.290 6.290 10 C 0.059 3.941 11 C 0.443 3.557 12 O -0.572 6.572 13 N -0.555 5.555 14 C -0.301 4.301 15 H 0.105 0.895 16 C 0.025 3.975 17 N -0.899 5.899 18 Si 0.933 3.067 19 H -0.272 1.272 20 H -0.284 1.284 21 H -0.272 1.272 22 H 0.081 0.919 23 H 0.076 0.924 24 H 0.087 0.913 25 H 0.145 0.855 26 H 0.167 0.833 27 H 0.071 0.929 28 H 0.070 0.930 29 H 0.393 0.607 30 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.240 15.691 -3.327 16.874 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.056 4.056 3 C -0.182 4.182 4 C -0.049 4.049 5 N -0.185 5.185 6 C -0.007 4.007 7 Cl 0.014 6.986 8 C 0.020 3.980 9 O -0.205 6.205 10 C -0.019 4.019 11 C 0.228 3.772 12 O -0.455 6.455 13 N -0.193 5.193 14 C -0.430 4.430 15 H 0.123 0.877 16 C -0.177 4.177 17 N -0.540 5.540 18 Si 0.760 3.240 19 H -0.198 1.198 20 H -0.209 1.209 21 H -0.198 1.198 22 H 0.099 0.901 23 H 0.094 0.906 24 H 0.106 0.894 25 H 0.163 0.837 26 H 0.184 0.816 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.227 0.773 30 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 5.944 15.047 -4.050 16.678 hybrid contribution -0.917 -0.552 0.755 1.309 sum 5.027 14.495 -3.295 15.692 Atomic orbital electron populations 1.20827 0.88798 1.04455 1.03503 1.20773 0.98068 0.91536 0.95182 1.22099 0.95232 0.98540 1.02312 1.22643 0.91748 0.95004 0.95534 1.67065 1.40963 0.97244 1.13226 1.22344 0.88496 0.89501 1.00338 1.98437 1.75282 1.28712 1.96147 1.19253 0.89034 0.87424 1.02254 1.86176 1.74852 1.31064 1.28360 1.22512 0.99946 0.95671 0.83791 1.19271 0.85732 0.86059 0.86146 1.90568 1.59707 1.71477 1.23757 1.41694 1.50887 1.19753 1.06968 1.19669 1.32364 0.95954 0.95050 0.87724 1.25282 0.97900 0.99995 0.94521 1.69602 1.46881 1.39690 0.97850 0.85877 0.79733 0.81058 0.77341 1.19773 1.20897 1.19780 0.90095 0.90560 0.89412 0.83725 0.81611 0.91100 0.91226 0.77314 0.91653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.27 9.86 36.00 0.35 -0.91 16 2 C -0.05 -0.58 5.93 -104.19 -0.62 -1.20 16 3 C -0.16 -1.53 9.81 -39.46 -0.39 -1.91 16 4 C 0.11 1.09 11.17 -17.54 -0.20 0.90 16 5 N -0.47 -6.52 10.34 -10.24 -0.11 -6.63 16 6 C 0.16 2.45 7.29 -17.28 -0.13 2.32 16 7 Cl -0.01 -0.23 28.66 -51.86 -1.49 -1.72 16 8 C 0.07 1.07 5.72 -39.05 -0.22 0.84 16 9 O -0.29 -5.43 8.24 -39.44 -0.32 -5.76 16 10 C 0.06 1.08 6.54 36.01 0.24 1.32 16 11 C 0.44 10.64 7.86 -10.98 -0.09 10.55 16 12 O -0.57 -16.03 16.08 -14.36 -0.23 -16.26 16 13 N -0.56 -13.96 5.29 -10.96 -0.06 -14.01 16 14 C -0.30 -8.30 9.68 -14.93 -0.14 -8.44 16 15 H 0.10 3.02 7.16 -52.49 -0.38 2.64 16 16 C 0.03 0.66 5.50 -17.47 -0.10 0.57 16 17 N -0.90 -23.99 13.05 55.50 0.72 -23.26 16 18 Si 0.93 20.73 29.55 -169.99 -5.02 15.70 16 19 H -0.27 -6.04 7.11 56.52 0.40 -5.64 16 20 H -0.28 -6.14 7.11 56.52 0.40 -5.73 16 21 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 22 H 0.08 0.78 8.14 -51.93 -0.42 0.36 16 23 H 0.08 0.60 8.10 -51.93 -0.42 0.18 16 24 H 0.09 1.14 7.62 -51.93 -0.40 0.74 16 25 H 0.14 0.85 8.06 -52.49 -0.42 0.43 16 26 H 0.17 1.06 8.06 -52.49 -0.42 0.63 16 27 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 28 H 0.07 1.09 8.14 -51.93 -0.42 0.67 16 29 H 0.39 9.32 7.90 -40.82 -0.32 9.00 16 30 H 0.27 6.91 8.31 -40.82 -0.34 6.57 16 LS Contribution 291.52 15.07 4.39 4.39 Total: -1.00 -32.29 291.52 -6.16 -38.45 By element: Atomic # 1 Polarization: 7.83 SS G_CDS: -2.76 Total: 5.06 kcal Atomic # 6 Polarization: 5.31 SS G_CDS: -1.29 Total: 4.03 kcal Atomic # 7 Polarization: -44.46 SS G_CDS: 0.56 Total: -43.90 kcal Atomic # 8 Polarization: -21.46 SS G_CDS: -0.56 Total: -22.02 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.02 Total: 15.70 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -1.49 Total: -1.72 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -32.29 -6.16 -38.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000779811888.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.042 kcal (2) G-P(sol) polarization free energy of solvation -32.289 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds