Wall clock time and date at job start Mon Mar 30 2020 01:02:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31001 * 1 3 3 C 1.50696 * 120.00368 * 2 1 4 4 N 1.46500 * 109.46986 * 124.99712 * 3 2 1 5 5 C 1.46502 * 119.99757 * 265.11747 * 4 3 2 6 6 C 1.50696 * 109.47634 * 263.23411 * 5 4 3 7 7 H 1.08007 * 119.99906 * 359.97438 * 6 5 4 8 8 C 1.37877 * 120.00198 * 180.02562 * 6 5 4 9 9 N 1.31518 * 119.99927 * 180.02562 * 8 6 5 10 10 Si 1.86795 * 120.00128 * 359.97438 * 8 6 5 11 11 H 1.48504 * 109.46918 * 90.00078 * 10 8 6 12 12 H 1.48499 * 109.47388 * 210.00387 * 10 8 6 13 13 H 1.48504 * 109.47248 * 330.00651 * 10 8 6 14 14 C 1.34773 * 120.00167 * 85.12523 * 4 3 2 15 15 O 1.21584 * 120.00287 * 4.12215 * 14 4 3 16 16 C 1.47524 * 120.00027 * 184.12461 * 14 4 3 17 17 C 1.36783 * 126.92781 * 173.29236 * 16 14 4 18 18 C 1.41410 * 103.83617 * 180.02562 * 17 16 14 19 19 Cl 1.73598 * 126.72443 * 180.02562 * 18 17 16 20 20 N 1.30227 * 106.55136 * 359.97438 * 18 17 16 21 21 O 1.20882 * 111.95991 * 359.69902 * 20 18 17 22 22 H 1.07999 * 119.99584 * 0.02562 * 1 2 3 23 23 H 1.08003 * 120.00184 * 179.97438 * 1 2 3 24 24 H 1.07999 * 119.99584 * 179.97438 * 2 1 3 25 25 H 1.08998 * 109.46854 * 4.99464 * 3 2 1 26 26 H 1.09003 * 109.47054 * 244.99410 * 3 2 1 27 27 H 1.09000 * 109.47084 * 23.23675 * 5 4 3 28 28 H 1.09008 * 109.46906 * 143.23032 * 5 4 3 29 29 H 0.97000 * 120.00122 * 179.97438 * 9 8 6 30 30 H 1.07997 * 128.08037 * 0.03832 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0636 1.3050 0.0000 4 7 2.9938 1.3317 1.1315 5 6 2.5951 1.9615 2.3927 6 6 3.1226 3.3723 2.4387 7 1 3.6977 3.7610 1.6113 8 6 2.8718 4.1667 3.5374 9 7 3.3318 5.3981 3.5773 10 14 1.8777 3.4942 4.9688 11 1 2.7918 2.8557 5.9496 12 1 1.1434 4.6048 5.6266 13 1 0.9076 2.4875 4.4681 14 6 4.2163 0.7772 1.0121 15 8 4.5755 0.3216 -0.0564 16 6 5.1188 0.7230 2.1778 17 6 6.3270 0.0861 2.2529 18 6 6.7646 0.3455 3.5723 19 17 8.2458 -0.1936 4.2995 20 7 5.8392 1.0689 4.1346 21 8 4.9220 1.2955 3.3805 22 1 -0.5399 0.9353 -0.0004 23 1 -0.5400 -0.9353 -0.0004 24 1 1.8499 -0.9353 0.0004 25 1 1.3587 2.1315 0.0895 26 1 2.6215 1.4024 -0.9314 27 1 1.5074 1.9777 2.4628 28 1 3.0045 1.3931 3.2280 29 1 3.1551 5.9571 4.3501 30 1 6.8294 -0.4819 1.4839 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000823090458.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:02:20 Heat of formation + Delta-G solvation = 58.011180 kcal Electronic energy + Delta-G solvation = -18586.913758 eV Core-core repulsion = 15413.198123 eV Total energy + Delta-G solvation = -3173.715635 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -44.78926 -39.41156 -36.99893 -35.93795 -33.76658 -33.31306 -32.35088 -31.52824 -28.30322 -26.36693 -23.51079 -23.27122 -22.32406 -20.43019 -19.51436 -17.62892 -17.31429 -16.92674 -16.14176 -16.05953 -15.08846 -14.74540 -14.39658 -14.07771 -13.53897 -13.23482 -13.03842 -12.58681 -12.48941 -12.17811 -11.83784 -11.77761 -11.23988 -11.05942 -10.87961 -10.69516 -10.33882 -9.93643 -9.84227 -9.65211 -9.50568 -9.26411 -8.71256 -8.08896 -6.21896 -4.25046 1.09202 1.58016 2.05980 2.31077 2.98611 3.22644 3.26768 3.31576 3.39073 3.69100 4.28712 4.46724 4.95697 4.98459 5.10185 5.17028 5.27247 5.34473 5.71528 5.83685 5.98148 6.09992 6.23890 6.59746 6.72453 6.78977 7.06582 7.36573 7.72472 8.13486 8.31264 8.44355 8.80933 9.36454 10.90485 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.013445 B = 0.008601 C = 0.005862 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2082.036356 B = 3254.743060 C = 4775.720958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C -0.162 4.162 3 C 0.144 3.856 4 N -0.568 5.568 5 C 0.201 3.799 6 C -0.544 4.544 7 H 0.079 0.921 8 C 0.086 3.914 9 N -0.887 5.887 10 Si 0.864 3.136 11 H -0.267 1.267 12 H -0.283 1.283 13 H -0.263 1.263 14 C 0.603 3.397 15 O -0.537 6.537 16 C -0.044 4.044 17 C -0.159 4.159 18 C 0.041 3.959 19 Cl 0.016 6.984 20 N -0.336 5.336 21 O 0.183 5.817 22 H 0.099 0.901 23 H 0.095 0.905 24 H 0.108 0.892 25 H 0.093 0.907 26 H 0.089 0.911 27 H 0.045 0.955 28 H 0.038 0.962 29 H 0.267 0.733 30 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.682 -11.223 -2.239 11.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C -0.181 4.181 3 C 0.022 3.978 4 N -0.296 5.296 5 C 0.080 3.920 6 C -0.582 4.582 7 H 0.097 0.903 8 C -0.119 4.119 9 N -0.524 5.524 10 Si 0.690 3.310 11 H -0.192 1.192 12 H -0.208 1.208 13 H -0.188 1.188 14 C 0.388 3.612 15 O -0.416 6.416 16 C -0.110 4.110 17 C -0.183 4.183 18 C -0.141 4.141 19 Cl 0.043 6.957 20 N -0.033 5.033 21 O 0.103 5.897 22 H 0.118 0.882 23 H 0.114 0.886 24 H 0.126 0.874 25 H 0.112 0.888 26 H 0.107 0.893 27 H 0.063 0.937 28 H 0.055 0.945 29 H 0.077 0.923 30 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 0.898 -10.784 -1.361 10.907 hybrid contribution 0.038 -0.530 0.455 0.700 sum 0.936 -11.314 -0.907 11.389 Atomic orbital electron populations 1.23830 0.95716 1.01845 1.01052 1.23367 0.96157 0.99164 0.99407 1.20590 0.92002 0.95359 0.89884 1.47902 1.12600 1.53379 1.15769 1.20155 0.97205 0.94476 0.80136 1.21217 1.36221 0.94953 1.05777 0.90290 1.24764 0.94916 0.94496 0.97707 1.69873 1.44662 1.07450 1.30369 0.87023 0.81048 0.79297 0.83622 1.19245 1.20836 1.18797 1.16505 0.80977 0.79137 0.84617 1.90790 1.75187 1.49924 1.25719 1.24144 0.98054 0.99469 0.89351 1.22545 0.94960 1.04503 0.96283 1.23925 0.93831 1.03610 0.92776 1.98377 1.26833 1.87616 1.82837 1.73896 0.97639 1.13939 1.17871 1.85569 1.33061 1.53594 1.17484 0.88244 0.88627 0.87445 0.88839 0.89296 0.93699 0.94490 0.92268 0.79513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.24 14.32 29.01 0.42 -1.82 16 2 C -0.16 -2.26 9.81 -36.03 -0.35 -2.62 16 3 C 0.14 2.33 5.80 -5.20 -0.03 2.30 16 4 N -0.57 -10.99 2.47 -177.67 -0.44 -11.43 16 5 C 0.20 4.32 3.81 -5.19 -0.02 4.30 16 6 C -0.54 -14.02 9.01 -34.44 -0.31 -14.33 16 7 H 0.08 2.28 8.06 -52.48 -0.42 1.85 16 8 C 0.09 2.30 5.47 -17.82 -0.10 2.21 16 9 N -0.89 -25.71 13.96 55.43 0.77 -24.94 16 10 Si 0.86 19.97 27.47 -169.99 -4.67 15.30 16 11 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 12 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 13 H -0.26 -5.66 6.54 56.52 0.37 -5.29 16 14 C 0.60 11.84 7.57 -12.48 -0.09 11.75 16 15 O -0.54 -10.86 16.55 5.29 0.09 -10.77 16 16 C -0.04 -0.84 6.86 -36.32 -0.25 -1.09 16 17 C -0.16 -2.61 10.96 -38.90 -0.43 -3.04 16 18 C 0.04 0.69 7.97 -17.03 -0.14 0.56 16 19 Cl 0.02 0.22 29.33 -51.86 -1.52 -1.31 16 20 N -0.34 -6.79 12.05 32.82 0.40 -6.39 16 21 O 0.18 3.86 7.35 15.53 0.11 3.97 16 22 H 0.10 1.13 7.84 -52.49 -0.41 0.71 16 23 H 0.10 0.98 8.06 -52.48 -0.42 0.56 16 24 H 0.11 1.51 8.06 -52.49 -0.42 1.09 16 25 H 0.09 1.45 7.69 -51.93 -0.40 1.05 16 26 H 0.09 1.43 7.52 -51.93 -0.39 1.04 16 27 H 0.05 0.93 7.08 -51.93 -0.37 0.57 16 28 H 0.04 0.81 4.89 -51.92 -0.25 0.55 16 29 H 0.27 7.30 8.31 -40.82 -0.34 6.96 16 30 H 0.19 2.50 8.06 -52.49 -0.42 2.07 16 LS Contribution 287.08 15.07 4.33 4.33 Total: -1.00 -28.91 287.08 -4.91 -33.83 By element: Atomic # 1 Polarization: 1.89 SS G_CDS: -2.68 Total: -0.79 kcal Atomic # 6 Polarization: -0.48 SS G_CDS: -1.30 Total: -1.79 kcal Atomic # 7 Polarization: -43.49 SS G_CDS: 0.73 Total: -42.76 kcal Atomic # 8 Polarization: -7.01 SS G_CDS: 0.20 Total: -6.80 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -4.67 Total: 15.30 kcal Atomic # 17 Polarization: 0.22 SS G_CDS: -1.52 Total: -1.31 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -28.91 -4.91 -33.83 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000823090458.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.839 kcal (2) G-P(sol) polarization free energy of solvation -28.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.926 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.828 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds