Wall clock time and date at job start Mon Mar 30 2020 00:46:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.08993 * 109.47057 * 2 1 4 4 O 1.42900 * 109.47053 * 120.00099 * 2 1 3 5 5 C 1.35907 * 116.99734 * 275.21208 * 4 2 1 6 6 C 1.38760 * 120.04445 * 185.47438 * 5 4 2 7 7 C 1.38130 * 119.96445 * 179.97438 * 6 5 4 8 8 C 1.38270 * 120.07215 * 359.97438 * 7 6 5 9 9 C 1.38358 * 120.09521 * 0.02562 * 8 7 6 10 10 Cl 1.73601 * 119.98536 * 180.02562 * 9 8 7 11 11 C 1.38288 * 120.03408 * 359.72097 * 9 8 7 12 12 C 1.50696 * 109.46896 * 239.99645 * 2 1 3 13 13 O 1.21206 * 120.00254 * 244.99942 * 12 2 1 14 14 O 1.34318 * 120.00129 * 64.99952 * 12 2 1 15 15 C 1.34917 * 117.00340 * 179.97438 * 14 12 2 16 16 H 1.08005 * 119.99594 * 0.02562 * 15 14 12 17 17 C 1.38746 * 120.00284 * 180.02562 * 15 14 12 18 18 N 1.31439 * 120.00091 * 0.02562 * 17 15 14 19 19 Si 1.86806 * 120.00302 * 180.02562 * 17 15 14 20 20 H 1.48504 * 109.46889 * 89.99966 * 19 17 15 21 21 H 1.48496 * 109.47084 * 210.00086 * 19 17 15 22 22 H 1.48496 * 109.46807 * 329.99877 * 19 17 15 23 23 H 1.08998 * 109.47508 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47459 * 300.00423 * 1 2 3 25 25 H 1.09004 * 109.47171 * 59.99894 * 1 2 3 26 26 H 1.07996 * 120.02017 * 0.02562 * 6 5 4 27 27 H 1.08000 * 119.96448 * 179.97438 * 7 6 5 28 28 H 1.08003 * 119.94889 * 179.97438 * 8 7 6 29 29 H 1.07996 * 120.04056 * 180.30544 * 11 9 8 30 30 H 0.97001 * 120.00222 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 8 2.0063 -0.6737 1.1668 5 6 2.1082 0.0615 2.3053 6 6 2.6695 -0.4967 3.4449 7 6 2.7728 0.2522 4.6009 8 6 2.3179 1.5577 4.6237 9 6 1.7578 2.1171 3.4889 10 17 1.1882 3.7567 3.5205 11 6 1.6571 1.3728 2.3278 12 6 2.0322 -0.7105 -1.2304 13 8 2.6525 -1.7461 -1.1215 14 8 1.7926 -0.1961 -2.4478 15 6 2.2702 -0.8814 -3.5073 16 1 2.8171 -1.8001 -3.3541 17 6 2.0589 -0.4061 -4.7935 18 7 1.3938 0.7122 -4.9799 19 14 2.7196 -1.3554 -6.2605 20 1 1.6981 -2.3304 -6.7199 21 1 3.0322 -0.4098 -7.3620 22 1 3.9538 -2.0806 -5.8655 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5139 -0.8900 26 1 3.0262 -1.5159 3.4278 27 1 3.2093 -0.1825 5.4880 28 1 2.3993 2.1413 5.5288 29 1 1.2244 1.8110 1.4406 30 1 1.2464 1.0447 -5.8792 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000843448610.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:02 Heat of formation + Delta-G solvation = -116.078496 kcal Electronic energy + Delta-G solvation = -17812.114999 eV Core-core repulsion = 14598.557518 eV Total energy + Delta-G solvation = -3213.557481 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.80113 -40.79279 -38.85152 -37.43534 -37.11654 -34.42795 -33.29980 -31.77469 -30.74139 -27.82292 -25.84354 -24.06319 -23.47869 -21.75988 -20.02037 -19.57622 -18.60911 -17.56923 -17.11505 -16.97598 -16.44437 -16.16217 -16.08707 -15.82080 -14.93535 -14.81606 -14.34366 -14.15541 -13.70887 -13.45406 -13.30013 -13.11176 -12.83317 -12.72062 -12.42886 -12.24644 -12.14665 -12.02932 -11.96251 -11.89311 -11.06147 -10.74469 -9.94492 -9.34171 -8.59464 -6.40417 0.07976 0.25380 1.05147 1.19950 1.28186 1.44701 1.53748 1.59407 2.20764 2.58413 2.77136 2.91456 3.54977 3.77376 3.80762 3.91885 4.08003 4.23857 4.34094 4.48691 4.59247 4.66207 4.68679 5.02776 5.08862 5.11334 5.20546 5.31902 5.60089 5.75454 6.18184 6.52150 6.84814 7.61664 8.60368 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.030763 B = 0.004162 C = 0.003814 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 909.976048 B = 6725.726493 C = 7339.188938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.114 3.886 3 H 0.115 0.885 4 O -0.306 6.306 5 C 0.121 3.879 6 C -0.155 4.155 7 C -0.055 4.055 8 C -0.145 4.145 9 C -0.003 4.003 10 Cl -0.064 7.064 11 C -0.215 4.215 12 C 0.396 3.604 13 O -0.569 6.569 14 O -0.228 6.228 15 C -0.426 4.426 16 H 0.082 0.918 17 C 0.002 3.998 18 N -0.896 5.896 19 Si 1.018 2.982 20 H -0.258 1.258 21 H -0.258 1.258 22 H -0.265 1.265 23 H 0.066 0.934 24 H 0.101 0.899 25 H 0.086 0.914 26 H 0.143 0.857 27 H 0.178 0.822 28 H 0.162 0.838 29 H 0.141 0.859 30 H 0.281 0.719 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.770 4.184 17.729 18.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.056 3.944 3 H 0.133 0.867 4 O -0.220 6.220 5 C 0.076 3.924 6 C -0.174 4.174 7 C -0.073 4.073 8 C -0.164 4.164 9 C -0.030 4.030 10 Cl -0.035 7.035 11 C -0.235 4.235 12 C 0.243 3.757 13 O -0.466 6.466 14 O -0.136 6.136 15 C -0.501 4.501 16 H 0.099 0.901 17 C -0.199 4.199 18 N -0.532 5.532 19 Si 0.836 3.164 20 H -0.183 1.183 21 H -0.182 1.182 22 H -0.189 1.189 23 H 0.085 0.915 24 H 0.120 0.880 25 H 0.105 0.895 26 H 0.161 0.839 27 H 0.195 0.805 28 H 0.179 0.821 29 H 0.159 0.841 30 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.708 4.024 17.536 18.005 hybrid contribution 0.129 -0.125 -1.011 1.027 sum -0.578 3.899 16.525 16.988 Atomic orbital electron populations 1.22241 0.90102 1.04256 1.05214 1.21492 0.97074 0.95720 0.80073 0.86727 1.86161 1.81528 1.38014 1.16276 1.19273 0.96163 0.90247 0.86724 1.20893 1.02793 1.02570 0.91137 1.21322 0.95943 0.92450 0.97568 1.21343 1.00649 0.96496 0.97873 1.20789 1.00384 0.86548 0.95296 1.98378 1.87622 1.18827 1.98721 1.21263 1.08126 0.94154 0.99929 1.23664 0.80519 0.85164 0.86401 1.90548 1.42221 1.26212 1.87637 1.83856 1.66622 1.49841 1.13270 1.21460 1.37549 1.08067 0.83057 0.90052 1.26524 0.95835 0.97269 1.00251 1.70053 1.37976 1.20736 1.24478 0.84624 0.78853 0.77718 0.75158 1.18290 1.18150 1.18905 0.91537 0.88040 0.89545 0.83943 0.80493 0.82088 0.84130 0.90906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -5.18 9.15 71.98 0.66 -4.52 16 2 C 0.11 4.40 2.75 29.85 0.08 4.48 16 3 H 0.12 4.00 6.31 -2.39 -0.02 3.99 16 4 O -0.31 -11.48 9.34 -73.51 -0.69 -12.17 16 5 C 0.12 3.57 6.60 22.50 0.15 3.72 16 6 C -0.16 -3.65 9.99 22.37 0.22 -3.42 16 7 C -0.06 -0.91 10.04 22.25 0.22 -0.68 16 8 C -0.15 -2.50 9.83 22.31 0.22 -2.28 16 9 C 0.00 -0.08 6.32 22.31 0.14 0.07 16 10 Cl -0.06 -1.33 28.95 -2.72 -0.08 -1.41 16 11 C -0.22 -5.66 8.02 22.39 0.18 -5.48 16 12 C 0.40 20.65 7.23 71.23 0.52 21.16 16 13 O -0.57 -33.15 15.74 27.21 0.43 -32.72 16 14 O -0.23 -13.36 9.74 14.83 0.14 -13.21 16 15 C -0.43 -25.87 9.64 67.94 0.66 -25.21 16 16 H 0.08 5.06 6.86 -2.91 -0.02 5.04 16 17 C 0.00 0.14 5.49 84.87 0.47 0.60 16 18 N -0.90 -51.82 13.67 21.62 0.30 -51.52 16 19 Si 1.02 42.92 29.55 68.60 2.03 44.95 16 20 H -0.26 -10.28 7.11 99.48 0.71 -9.57 16 21 H -0.26 -9.98 7.11 99.48 0.71 -9.27 16 22 H -0.26 -11.03 7.11 99.48 0.71 -10.32 16 23 H 0.07 2.20 8.14 -2.39 -0.02 2.18 16 24 H 0.10 2.56 6.91 -2.39 -0.02 2.55 16 25 H 0.09 2.88 8.14 -2.39 -0.02 2.86 16 26 H 0.14 3.14 8.06 -2.91 -0.02 3.12 16 27 H 0.18 1.52 8.06 -2.91 -0.02 1.50 16 28 H 0.16 1.87 8.06 -2.91 -0.02 1.85 16 29 H 0.14 3.66 5.43 -2.91 -0.02 3.65 16 30 H 0.28 14.70 8.31 -92.71 -0.77 13.93 16 Total: -1.00 -72.99 287.64 6.82 -66.17 By element: Atomic # 1 Polarization: 10.31 SS G_CDS: 1.17 Total: 11.49 kcal Atomic # 6 Polarization: -15.08 SS G_CDS: 3.51 Total: -11.57 kcal Atomic # 7 Polarization: -51.82 SS G_CDS: 0.30 Total: -51.52 kcal Atomic # 8 Polarization: -57.99 SS G_CDS: -0.11 Total: -58.10 kcal Atomic # 14 Polarization: 42.92 SS G_CDS: 2.03 Total: 44.95 kcal Atomic # 17 Polarization: -1.33 SS G_CDS: -0.08 Total: -1.41 kcal Total: -72.99 6.82 -66.17 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000843448610.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.904 kcal (2) G-P(sol) polarization free energy of solvation -72.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -66.174 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.078 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds