Wall clock time and date at job start Mon Mar 30 2020 01:27:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35691 * 117.00091 * 2 1 4 4 C 1.38488 * 120.10716 * 359.97438 * 3 2 1 5 5 C 1.38286 * 120.26390 * 179.97438 * 4 3 2 6 6 C 1.38405 * 120.48084 * 0.02562 * 5 4 3 7 7 F 1.35095 * 119.89739 * 179.97438 * 6 5 4 8 8 C 1.38671 * 120.20218 * 359.97438 * 6 5 4 9 9 O 1.35705 * 120.13329 * 180.02562 * 8 6 5 10 10 C 1.42907 * 117.00252 * 89.99573 * 9 8 6 11 11 C 1.40330 * 119.73082 * 359.78246 * 8 6 5 12 12 C 1.47057 * 120.22994 * 180.23654 * 11 8 6 13 13 O 1.21576 * 119.99507 * 270.23007 * 12 11 8 14 14 O 1.34809 * 120.00215 * 90.23173 * 12 11 8 15 15 C 1.34869 * 117.00358 * 179.97438 * 14 12 11 16 16 H 1.08008 * 119.99711 * 0.02562 * 15 14 12 17 17 C 1.38770 * 120.00435 * 179.97438 * 15 14 12 18 18 N 1.31435 * 120.00297 * 180.02562 * 17 15 14 19 19 Si 1.86808 * 119.99847 * 0.02562 * 17 15 14 20 20 H 1.48507 * 109.46925 * 89.99964 * 19 17 15 21 21 H 1.48494 * 109.46985 * 209.99558 * 19 17 15 22 22 H 1.48497 * 109.47039 * 330.00083 * 19 17 15 23 23 H 1.09002 * 109.47382 * 300.00423 * 1 2 3 24 24 H 1.09001 * 109.46938 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.46926 * 60.00530 * 1 2 3 26 26 H 1.08003 * 119.86723 * 0.02562 * 4 3 2 27 27 H 1.08005 * 119.76189 * 180.02562 * 5 4 3 28 28 H 1.08996 * 109.46743 * 179.97438 * 10 9 8 29 29 H 1.08993 * 109.46892 * 300.00006 * 10 9 8 30 30 H 1.09001 * 109.46761 * 60.00215 * 10 9 8 31 31 H 0.97010 * 119.99992 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2090 0.0000 4 6 1.2930 2.3719 -0.0005 5 6 1.9175 3.6057 0.0000 6 6 3.2987 3.6935 0.0005 7 9 3.8965 4.9050 0.0005 8 6 4.0709 2.5417 0.0011 9 8 5.4251 2.6294 0.0021 10 6 6.0716 2.6714 1.2759 11 6 3.4463 1.2851 0.0057 12 6 4.2545 0.0566 0.0116 13 8 4.5931 -0.4533 -1.0389 14 8 4.6200 -0.5043 1.1817 15 6 5.3601 -1.6299 1.1165 16 1 5.6337 -2.0414 0.1561 17 6 5.7709 -2.2589 2.2833 18 7 6.4925 -3.3555 2.2198 19 14 5.2982 -1.5468 3.9444 20 1 4.0032 -2.1277 4.3816 21 1 6.3492 -1.8748 4.9408 22 1 5.1661 -0.0720 3.8313 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 -0.8901 26 1 0.2145 2.3149 -0.0005 27 1 1.3230 4.5075 0.0000 28 1 7.1501 2.7408 1.1338 29 1 5.7214 3.5405 1.8326 30 1 5.8365 1.7643 1.8327 31 1 6.7794 -3.7954 3.0355 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000869815307.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:32 Heat of formation + Delta-G solvation = -157.661413 kcal Electronic energy + Delta-G solvation = -21076.667403 eV Core-core repulsion = 17432.970376 eV Total energy + Delta-G solvation = -3643.697026 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.078 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.80328 -40.53445 -38.94376 -38.48958 -36.38974 -35.26964 -32.31520 -31.19868 -29.61122 -27.39299 -26.83784 -25.74238 -23.72418 -22.07520 -20.48250 -18.54761 -17.98725 -17.60905 -17.45960 -16.53702 -16.33731 -15.90530 -15.57607 -15.06268 -14.84038 -14.74762 -14.45765 -14.13718 -13.97585 -13.07134 -13.00259 -12.56953 -12.46225 -12.33761 -12.09330 -11.63257 -11.26050 -11.21643 -10.87722 -10.51802 -10.44111 -10.00060 -9.73187 -9.32475 -8.90208 -8.67842 -8.15316 -6.36905 -4.11346 0.81845 1.04883 3.01080 3.06237 3.19069 3.24793 3.30719 3.34424 3.83417 3.89533 4.23176 4.32641 4.66144 4.80465 5.02249 5.08058 5.12751 5.20199 5.24245 5.43700 5.44624 5.61252 5.76726 5.86025 5.95528 6.05917 6.30995 6.36455 7.22600 7.45137 7.70413 8.04124 8.58565 9.00574 9.65758 10.71525 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.017737 B = 0.007865 C = 0.006480 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1578.222045 B = 3559.343502 C = 4320.063070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.296 6.296 3 C 0.168 3.832 4 C -0.193 4.193 5 C -0.090 4.090 6 C 0.039 3.961 7 F -0.132 7.132 8 C 0.139 3.861 9 O -0.321 6.321 10 C 0.031 3.969 11 C -0.106 4.106 12 C 0.472 3.528 13 O -0.515 6.515 14 O -0.243 6.243 15 C -0.377 4.377 16 H 0.111 0.889 17 C 0.068 3.932 18 N -0.872 5.872 19 Si 0.901 3.099 20 H -0.272 1.272 21 H -0.281 1.281 22 H -0.261 1.261 23 H 0.059 0.941 24 H 0.105 0.895 25 H 0.058 0.942 26 H 0.147 0.853 27 H 0.146 0.854 28 H 0.101 0.899 29 H 0.047 0.953 30 H 0.065 0.935 31 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.887 13.582 0.333 18.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.208 6.208 3 C 0.121 3.879 4 C -0.211 4.211 5 C -0.109 4.109 6 C 0.019 3.981 7 F -0.111 7.111 8 C 0.093 3.907 9 O -0.238 6.238 10 C -0.062 4.062 11 C -0.108 4.108 12 C 0.316 3.684 13 O -0.409 6.409 14 O -0.152 6.152 15 C -0.453 4.453 16 H 0.128 0.872 17 C -0.136 4.136 18 N -0.512 5.512 19 Si 0.726 3.274 20 H -0.198 1.198 21 H -0.206 1.206 22 H -0.185 1.185 23 H 0.077 0.923 24 H 0.123 0.877 25 H 0.077 0.923 26 H 0.164 0.836 27 H 0.164 0.836 28 H 0.120 0.880 29 H 0.066 0.934 30 H 0.084 0.916 31 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -11.441 13.112 0.045 17.402 hybrid contribution -0.317 0.447 0.900 1.053 sum -11.758 13.559 0.944 17.972 Atomic orbital electron populations 1.23183 0.77846 1.04670 1.01313 1.86228 1.21682 1.25549 1.87334 1.18743 0.90036 0.85222 0.93903 1.20981 1.00564 0.90675 1.08913 1.20846 0.91892 0.98832 0.99335 1.17633 0.90864 0.79862 1.09737 1.91481 1.84032 1.41139 1.94422 1.18266 0.84365 0.89243 0.98848 1.86012 1.13828 1.93575 1.30361 1.23216 0.98049 1.01699 0.83284 1.18758 0.90703 0.92699 1.08677 1.19688 0.81211 0.84084 0.83405 1.90727 1.54431 1.62732 1.32972 1.83636 1.60679 1.39098 1.31746 1.20666 1.28680 0.98679 0.97265 0.87172 1.24502 0.95375 0.95014 0.98687 1.69603 1.34525 1.17201 1.29847 0.86293 0.78532 0.80510 0.82053 1.19754 1.20634 1.18530 0.92283 0.87699 0.92324 0.83578 0.83636 0.88036 0.93399 0.91599 0.91015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.25 9.81 101.05 0.99 1.25 16 2 O -0.30 -5.08 9.95 -18.78 -0.19 -5.26 16 3 C 0.17 2.87 6.70 -38.70 -0.26 2.61 16 4 C -0.19 -2.36 9.02 -39.47 -0.36 -2.71 16 5 C -0.09 -1.08 10.00 -39.50 -0.39 -1.47 16 6 C 0.04 0.60 7.29 -39.36 -0.29 0.31 16 7 F -0.13 -1.98 17.10 2.25 0.04 -1.94 16 8 C 0.14 2.61 5.74 -38.64 -0.22 2.39 16 9 O -0.32 -6.35 9.73 -18.82 -0.18 -6.53 16 10 C 0.03 0.52 11.13 101.05 1.12 1.64 16 11 C -0.11 -2.20 5.77 -104.75 -0.60 -2.81 16 12 C 0.47 12.28 6.39 34.31 0.22 12.49 16 13 O -0.52 -15.02 16.36 -19.33 -0.32 -15.34 16 14 O -0.24 -6.71 8.31 -21.89 -0.18 -6.90 16 15 C -0.38 -11.44 10.11 30.93 0.31 -11.13 16 16 H 0.11 3.69 7.09 -52.48 -0.37 3.32 16 17 C 0.07 1.96 5.49 -17.52 -0.10 1.86 16 18 N -0.87 -25.91 13.96 55.48 0.77 -25.14 16 19 Si 0.90 21.46 28.62 -169.99 -4.86 16.59 16 20 H -0.27 -6.34 7.11 56.52 0.40 -5.93 16 21 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 22 H -0.26 -6.03 7.11 56.52 0.40 -5.63 16 23 H 0.06 0.48 7.66 -51.93 -0.40 0.08 16 24 H 0.10 0.93 8.14 -51.93 -0.42 0.51 16 25 H 0.06 0.47 7.66 -51.93 -0.40 0.07 16 26 H 0.15 1.21 6.28 -52.48 -0.33 0.88 16 27 H 0.15 1.20 8.06 -52.48 -0.42 0.77 16 28 H 0.10 1.45 8.14 -51.93 -0.42 1.02 16 29 H 0.05 0.67 8.14 -51.93 -0.42 0.24 16 30 H 0.07 1.24 7.87 -51.93 -0.41 0.83 16 31 H 0.28 7.56 8.31 -40.82 -0.34 7.22 16 LS Contribution 290.16 15.07 4.37 4.37 Total: -1.00 -35.46 290.16 -2.85 -38.31 By element: Atomic # 1 Polarization: 0.13 SS G_CDS: -2.73 Total: -2.60 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: 0.43 Total: 4.43 kcal Atomic # 7 Polarization: -25.91 SS G_CDS: 0.77 Total: -25.14 kcal Atomic # 8 Polarization: -33.16 SS G_CDS: -0.87 Total: -34.03 kcal Atomic # 9 Polarization: -1.98 SS G_CDS: 0.04 Total: -1.94 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -4.86 Total: 16.59 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -35.46 -2.85 -38.31 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000869815307.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.348 kcal (2) G-P(sol) polarization free energy of solvation -35.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds