Wall clock time and date at job start Mon Mar 30 2020 01:08:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34752 * 117.00040 * 2 1 4 4 O 1.21511 * 120.00078 * 359.97438 * 3 2 1 5 5 C 1.47405 * 120.00136 * 179.97438 * 3 2 1 6 6 C 1.39645 * 120.47266 * 359.97438 * 5 3 2 7 7 N 1.31652 * 120.52526 * 180.02562 * 6 5 3 8 8 C 1.32607 * 121.65887 * 0.02562 * 7 6 5 9 9 N 1.38495 * 119.53590 * 179.97438 * 8 7 6 10 10 C 1.46495 * 119.99952 * 359.97438 * 9 8 7 11 11 C 1.50701 * 109.46857 * 179.97438 * 10 9 8 12 12 H 1.07995 * 120.00191 * 0.02562 * 11 10 9 13 13 C 1.37879 * 120.00056 * 179.97438 * 11 10 9 14 14 N 1.31519 * 119.99817 * 0.02562 * 13 11 10 15 15 Si 1.86798 * 120.00184 * 180.02562 * 13 11 10 16 16 H 1.48499 * 109.47284 * 89.99816 * 15 13 11 17 17 H 1.48504 * 109.47001 * 210.00062 * 15 13 11 18 18 H 1.48499 * 109.46892 * 330.00242 * 15 13 11 19 19 C 1.39474 * 120.92558 * 359.97438 * 8 7 6 20 20 Cl 1.73601 * 120.31874 * 180.02562 * 19 8 7 21 21 C 1.36950 * 119.36383 * 359.97438 * 19 8 7 22 22 H 1.08996 * 109.47404 * 179.97438 * 1 2 3 23 23 H 1.08998 * 109.47292 * 300.00280 * 1 2 3 24 24 H 1.09005 * 109.46828 * 60.00406 * 1 2 3 25 25 H 1.07991 * 119.73596 * 359.74143 * 6 5 3 26 26 H 0.97002 * 119.99753 * 179.97438 * 9 8 7 27 27 H 1.08996 * 109.47141 * 299.99735 * 10 9 8 28 28 H 1.09008 * 109.47318 * 60.00005 * 10 9 8 29 29 H 0.96996 * 119.99484 * 180.02562 * 14 13 11 30 30 H 1.07994 * 120.75888 * 180.02562 * 21 19 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0638 1.2006 0.0000 4 8 1.4020 2.2197 -0.0005 5 6 3.5358 1.2778 0.0006 6 6 4.3060 0.1130 0.0017 7 7 5.6208 0.1807 0.0027 8 6 6.2578 1.3437 0.0032 9 7 7.6426 1.3637 0.0048 10 6 8.3933 0.1057 0.0065 11 6 9.8708 0.4024 0.0074 12 1 10.2160 1.4257 0.0072 13 6 10.7818 -0.6325 0.0095 14 7 10.3613 -1.8787 0.0102 15 14 12.6132 -0.2647 0.0114 16 1 13.0969 -0.1658 1.4119 17 1 13.3381 -1.3567 -0.6867 18 1 12.8606 1.0208 -0.6896 19 6 5.5528 2.5472 0.0022 20 17 6.4028 4.0608 0.0022 21 6 4.1835 2.5233 0.0001 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 3.8193 -0.8510 0.0063 26 1 8.1154 2.2107 0.0049 27 1 8.1372 -0.4690 0.8965 28 1 8.1392 -0.4702 -0.8835 29 1 11.0023 -2.6067 0.0121 30 1 3.6151 3.4415 -0.0012 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000882274752.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:08:21 Heat of formation + Delta-G solvation = -59.164817 kcal Electronic energy + Delta-G solvation = -17472.001914 eV Core-core repulsion = 14293.205147 eV Total energy + Delta-G solvation = -3178.796767 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.63931 -39.58881 -36.46554 -36.40434 -35.52493 -32.85675 -32.11731 -30.40142 -27.96185 -26.76852 -23.83735 -23.81771 -21.87421 -20.92780 -18.13084 -18.05256 -16.99358 -16.33552 -16.20722 -15.99265 -14.99781 -14.74878 -14.59474 -14.13191 -13.45584 -13.32938 -13.07487 -12.78855 -12.51691 -12.22193 -12.15098 -11.81830 -11.07756 -11.03322 -10.96465 -10.84748 -10.66386 -10.34295 -10.03099 -9.50961 -9.44266 -9.23383 -8.65183 -7.30115 -6.26751 -4.34241 0.88907 1.31873 2.17515 2.68800 2.77977 3.19480 3.26042 3.28252 3.68589 3.98168 4.26482 4.64938 4.87737 4.94693 5.01497 5.07994 5.10239 5.15122 5.36791 5.42629 5.79983 6.01998 6.35769 6.42999 6.99792 7.34977 7.42321 7.56903 7.79815 7.82113 8.03655 8.45118 8.75436 9.32033 10.83074 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.026801 B = 0.004321 C = 0.003731 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1044.467050 B = 6477.913261 C = 7501.933937 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.039 3.961 2 O -0.357 6.357 3 C 0.528 3.472 4 O -0.524 6.524 5 C -0.275 4.275 6 C 0.231 3.769 7 N -0.530 5.530 8 C 0.450 3.550 9 N -0.667 5.667 10 C 0.250 3.750 11 C -0.550 4.550 12 H 0.063 0.937 13 C 0.068 3.932 14 N -0.883 5.883 15 Si 0.904 3.096 16 H -0.278 1.278 17 H -0.283 1.283 18 H -0.272 1.272 19 C -0.184 4.184 20 Cl -0.063 7.063 21 C 0.043 3.957 22 H 0.100 0.900 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.172 0.828 26 H 0.408 0.592 27 H 0.036 0.964 28 H 0.036 0.964 29 H 0.267 0.733 30 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.389 5.099 -0.013 15.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.274 6.274 3 C 0.374 3.626 4 O -0.414 6.414 5 C -0.283 4.283 6 C 0.066 3.934 7 N -0.248 5.248 8 C 0.206 3.794 9 N -0.287 5.287 10 C 0.129 3.871 11 C -0.589 4.589 12 H 0.081 0.919 13 C -0.137 4.137 14 N -0.520 5.520 15 Si 0.731 3.269 16 H -0.204 1.204 17 H -0.209 1.209 18 H -0.197 1.197 19 C -0.219 4.219 20 Cl -0.034 7.034 21 C 0.017 3.983 22 H 0.119 0.881 23 H 0.080 0.920 24 H 0.080 0.920 25 H 0.189 0.811 26 H 0.245 0.755 27 H 0.054 0.946 28 H 0.054 0.946 29 H 0.077 0.923 30 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -13.681 4.395 -0.017 14.369 hybrid contribution 0.532 1.372 0.009 1.471 sum -13.149 5.766 -0.008 14.358 Atomic orbital electron populations 1.23224 0.76325 1.03535 1.02420 1.86545 1.23260 1.32829 1.84727 1.20747 0.88524 0.81203 0.72122 1.90806 1.66859 1.36021 1.47701 1.19415 0.89934 0.94889 1.24104 1.23021 0.87930 0.97873 0.84578 1.67747 1.09971 1.24480 1.22624 1.18619 0.87209 0.87400 0.86182 1.45905 1.00729 1.13133 1.68961 1.19351 0.89699 0.79490 0.98513 1.21191 0.90220 0.93499 1.53952 0.91867 1.24902 0.99634 0.94713 0.94411 1.69959 1.35029 0.98530 1.48445 0.86398 0.83955 0.78178 0.78339 1.20361 1.20883 1.19687 1.20741 0.92911 0.86873 1.21395 1.98337 1.77291 1.30172 1.97640 1.20837 0.91484 0.97873 0.88082 0.88120 0.92013 0.92022 0.81098 0.75451 0.94586 0.94579 0.92305 0.83429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.33 10.57 101.05 1.07 1.40 16 2 O -0.36 -4.27 9.83 -40.63 -0.40 -4.67 16 3 C 0.53 7.45 7.89 34.46 0.27 7.73 16 4 O -0.52 -8.36 16.20 -19.27 -0.31 -8.68 16 5 C -0.28 -4.03 5.89 -104.83 -0.62 -4.65 16 6 C 0.23 3.49 10.79 -17.10 -0.18 3.30 16 7 N -0.53 -9.87 9.53 -12.10 -0.12 -9.99 16 8 C 0.45 8.42 7.47 -155.21 -1.16 7.26 16 9 N -0.67 -13.66 5.64 -61.60 -0.35 -14.01 16 10 C 0.25 6.17 5.42 -5.20 -0.03 6.14 16 11 C -0.55 -14.43 9.28 -34.44 -0.32 -14.75 16 12 H 0.06 1.58 7.60 -52.49 -0.40 1.19 16 13 C 0.07 1.81 5.46 -17.82 -0.10 1.71 16 14 N -0.88 -24.83 13.29 55.43 0.74 -24.10 16 15 Si 0.90 20.36 29.54 -169.99 -5.02 15.34 16 16 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 17 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 18 H -0.27 -6.01 7.11 56.52 0.40 -5.61 16 19 C -0.18 -2.97 6.32 -39.59 -0.25 -3.22 16 20 Cl -0.06 -0.91 27.57 -51.86 -1.43 -2.34 16 21 C 0.04 0.63 9.44 -39.24 -0.37 0.26 16 22 H 0.10 0.56 8.14 -51.93 -0.42 0.14 16 23 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 24 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 25 H 0.17 2.10 7.61 -52.49 -0.40 1.70 16 26 H 0.41 7.79 6.94 -40.82 -0.28 7.50 16 27 H 0.04 0.97 8.14 -51.93 -0.42 0.54 16 28 H 0.04 0.97 8.14 -51.92 -0.42 0.55 16 29 H 0.27 7.07 8.31 -40.82 -0.34 6.73 16 30 H 0.15 1.98 7.72 -52.49 -0.41 1.57 16 LS Contribution 290.31 15.07 4.37 4.37 Total: -1.00 -29.17 290.31 -6.94 -36.10 By element: Atomic # 1 Polarization: 5.52 SS G_CDS: -2.73 Total: 2.78 kcal Atomic # 6 Polarization: 6.87 SS G_CDS: -1.69 Total: 5.18 kcal Atomic # 7 Polarization: -48.37 SS G_CDS: 0.27 Total: -48.09 kcal Atomic # 8 Polarization: -12.63 SS G_CDS: -0.71 Total: -13.35 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.02 Total: 15.34 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.43 Total: -2.34 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -29.17 -6.94 -36.10 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000882274752.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.063 kcal (2) G-P(sol) polarization free energy of solvation -29.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.935 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.102 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds