Wall clock time and date at job start Mon Mar 30 2020 00:46:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09006 * 109.46716 * 2 1 4 4 O 1.42897 * 109.47256 * 240.00943 * 2 1 3 5 5 C 1.35930 * 117.00317 * 84.99418 * 4 2 1 6 6 C 1.38702 * 120.05894 * 354.51082 * 5 4 2 7 7 C 1.38153 * 119.95572 * 179.74237 * 6 5 4 8 8 C 1.38277 * 120.07873 * 0.53382 * 7 6 5 9 9 C 1.38256 * 120.11566 * 359.72313 * 8 7 6 10 10 C 1.38257 * 120.04088 * 0.02562 * 9 8 7 11 11 Cl 1.73604 * 120.03313 * 179.97438 * 10 9 8 12 12 C 1.50696 * 109.47517 * 120.00038 * 2 1 3 13 13 O 1.21213 * 119.99717 * 119.99912 * 12 2 1 14 14 O 1.34309 * 120.00330 * 300.28237 * 12 2 1 15 15 C 1.34916 * 117.00161 * 179.72209 * 14 12 2 16 16 H 1.08004 * 119.99975 * 359.97438 * 15 14 12 17 17 C 1.38750 * 120.00394 * 179.97438 * 15 14 12 18 18 N 1.31433 * 120.00475 * 179.97438 * 17 15 14 19 19 Si 1.86802 * 119.99578 * 0.02562 * 17 15 14 20 20 H 1.48504 * 109.47040 * 90.00075 * 19 17 15 21 21 H 1.48500 * 109.46963 * 209.99733 * 19 17 15 22 22 H 1.48497 * 109.47393 * 330.00062 * 19 17 15 23 23 H 1.09001 * 109.47710 * 59.99518 * 1 2 3 24 24 H 1.09005 * 109.46700 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47417 * 299.99266 * 1 2 3 26 26 H 1.08003 * 120.02093 * 0.02562 * 6 5 4 27 27 H 1.08000 * 119.96281 * 180.25578 * 7 6 5 28 28 H 1.07995 * 119.94690 * 179.74213 * 8 7 6 29 29 H 1.07995 * 119.97499 * 179.97438 * 9 8 7 30 30 H 0.96999 * 120.00192 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 8 2.0063 -0.6734 -1.1668 5 6 2.1124 0.0631 -2.3044 6 6 1.6592 1.3737 -2.3283 7 6 1.7730 2.1220 -3.4840 8 6 2.3280 1.5624 -4.6202 9 6 2.7759 0.2545 -4.6014 10 6 2.6692 -0.4971 -3.4459 11 17 3.2310 -2.1396 -3.4228 12 6 2.0324 -0.7104 1.2304 13 8 2.7293 -1.6959 1.1191 14 8 1.7033 -0.2549 2.4503 15 6 2.1814 -0.9403 3.5095 16 1 2.7984 -1.8130 3.3542 17 6 1.8803 -0.5241 4.7984 18 7 2.3456 -1.1921 5.8303 19 14 0.8125 0.9849 5.0671 20 1 -0.6139 0.5767 5.1322 21 1 1.1975 1.6432 6.3413 22 1 1.0048 1.9342 3.9415 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5137 0.8900 26 1 1.2219 1.8105 -1.4426 27 1 1.4239 3.1439 -3.5015 28 1 2.4121 2.1480 -5.5237 29 1 3.2086 -0.1804 -5.4902 30 1 2.1348 -0.9013 6.7314 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000914640315.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:07 Heat of formation + Delta-G solvation = -90.931487 kcal Electronic energy + Delta-G solvation = -18023.604517 eV Core-core repulsion = 14811.137492 eV Total energy + Delta-G solvation = -3212.467024 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.53844 -39.19090 -37.60762 -36.30632 -35.29033 -32.50467 -31.98171 -30.86480 -29.72297 -25.95339 -24.34932 -22.98026 -22.33901 -19.95554 -18.54725 -18.04592 -16.90622 -16.44713 -15.91199 -15.66015 -15.03618 -14.72490 -14.53956 -14.12271 -14.02667 -13.20482 -13.10621 -12.60175 -12.44178 -12.18986 -12.03514 -11.73017 -11.52073 -11.39489 -11.17647 -10.96460 -10.73415 -10.52966 -10.41559 -9.77261 -9.20133 -9.02024 -8.74096 -8.27496 -6.42006 -4.18860 0.97656 1.16550 2.20277 2.74760 3.04760 3.21286 3.27437 3.31932 3.47059 4.10926 4.18827 4.58648 4.69257 4.80239 4.96173 5.02241 5.07340 5.16420 5.27553 5.52906 5.57759 5.74331 5.92410 6.01376 6.12173 6.20931 6.24921 6.48195 7.24528 7.63781 7.98590 8.54535 8.94495 9.57424 10.66235 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.030029 B = 0.004897 C = 0.004361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 932.221618 B = 5716.162957 C = 6419.011259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.101 3.899 3 H 0.101 0.899 4 O -0.272 6.272 5 C 0.148 3.852 6 C -0.204 4.204 7 C -0.074 4.074 8 C -0.153 4.153 9 C -0.074 4.074 10 C -0.071 4.071 11 Cl -0.053 7.053 12 C 0.411 3.589 13 O -0.512 6.512 14 O -0.245 6.245 15 C -0.383 4.383 16 H 0.111 0.889 17 C 0.068 3.932 18 N -0.871 5.871 19 Si 0.904 3.096 20 H -0.272 1.272 21 H -0.281 1.281 22 H -0.260 1.260 23 H 0.069 0.931 24 H 0.075 0.925 25 H 0.089 0.911 26 H 0.141 0.859 27 H 0.131 0.869 28 H 0.131 0.869 29 H 0.138 0.862 30 H 0.281 0.719 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.701 8.424 -19.205 21.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.044 3.956 3 H 0.118 0.882 4 O -0.185 6.185 5 C 0.101 3.899 6 C -0.223 4.223 7 C -0.093 4.093 8 C -0.172 4.172 9 C -0.093 4.093 10 C -0.098 4.098 11 Cl -0.024 7.024 12 C 0.255 3.745 13 O -0.405 6.405 14 O -0.154 6.154 15 C -0.458 4.458 16 H 0.129 0.871 17 C -0.136 4.136 18 N -0.510 5.510 19 Si 0.729 3.271 20 H -0.197 1.197 21 H -0.206 1.206 22 H -0.184 1.184 23 H 0.088 0.912 24 H 0.094 0.906 25 H 0.107 0.893 26 H 0.159 0.841 27 H 0.148 0.852 28 H 0.149 0.851 29 H 0.155 0.845 30 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -3.409 7.775 -18.927 20.744 hybrid contribution -0.386 0.596 0.401 0.816 sum -3.796 8.371 -18.526 20.681 Atomic orbital electron populations 1.22320 0.92367 1.04590 1.03756 1.21584 0.95607 0.96213 0.82241 0.88174 1.86281 1.80322 1.36441 1.15406 1.18803 0.94329 0.90404 0.86389 1.21384 1.06573 0.93482 1.00837 1.21037 0.96595 0.99624 0.92017 1.20994 1.02176 0.94920 0.99082 1.20911 0.98496 0.93867 0.95994 1.20247 1.06700 0.88803 0.94055 1.98387 1.87740 1.17553 1.98695 1.22145 0.82445 0.85275 0.84671 1.90661 1.36961 1.26137 1.86725 1.83458 1.65240 1.53218 1.13492 1.20651 1.32256 1.11574 0.81316 0.87139 1.24514 0.97009 0.98504 0.93569 1.69595 1.43321 1.39421 0.98688 0.86243 0.80415 0.82239 0.78197 1.19721 1.20626 1.18411 0.91179 0.90587 0.89254 0.84108 0.85157 0.85120 0.84457 0.90901 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.47 9.10 37.16 0.34 -2.13 16 2 C 0.10 1.77 2.75 -27.89 -0.08 1.69 16 3 H 0.10 1.49 6.31 -51.93 -0.33 1.16 16 4 O -0.27 -4.94 8.79 -39.44 -0.35 -5.28 16 5 C 0.15 2.19 6.59 -39.20 -0.26 1.93 16 6 C -0.20 -2.39 8.24 -39.44 -0.33 -2.72 16 7 C -0.07 -0.70 10.04 -39.60 -0.40 -1.09 16 8 C -0.15 -1.37 10.04 -39.56 -0.40 -1.77 16 9 C -0.07 -0.78 9.83 -39.57 -0.39 -1.17 16 10 C -0.07 -0.98 6.33 -39.36 -0.25 -1.23 16 11 Cl -0.05 -0.78 28.51 -51.86 -1.48 -2.26 16 12 C 0.41 9.82 7.28 36.00 0.26 10.08 16 13 O -0.51 -14.25 15.74 -25.79 -0.41 -14.66 16 14 O -0.24 -6.33 8.47 -20.68 -0.18 -6.50 16 15 C -0.38 -11.29 10.10 30.92 0.31 -10.98 16 16 H 0.11 3.63 7.09 -52.48 -0.37 3.26 16 17 C 0.07 1.92 5.49 -17.53 -0.10 1.83 16 18 N -0.87 -25.57 13.96 55.48 0.77 -24.79 16 19 Si 0.90 20.76 28.62 -169.99 -4.86 15.90 16 20 H -0.27 -6.06 7.11 56.52 0.40 -5.65 16 21 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 22 H -0.26 -5.75 7.11 56.52 0.40 -5.35 16 23 H 0.07 0.78 6.91 -51.93 -0.36 0.43 16 24 H 0.08 1.15 8.14 -51.93 -0.42 0.72 16 25 H 0.09 1.24 8.11 -51.93 -0.42 0.81 16 26 H 0.14 1.45 5.43 -52.48 -0.29 1.17 16 27 H 0.13 0.85 8.06 -52.49 -0.42 0.43 16 28 H 0.13 0.80 8.06 -52.49 -0.42 0.37 16 29 H 0.14 1.13 8.06 -52.49 -0.42 0.71 16 30 H 0.28 7.49 8.31 -40.82 -0.34 7.15 16 LS Contribution 285.68 15.07 4.31 4.31 Total: -1.00 -33.41 285.68 -6.06 -39.47 By element: Atomic # 1 Polarization: 1.96 SS G_CDS: -2.59 Total: -0.64 kcal Atomic # 6 Polarization: -4.26 SS G_CDS: -1.28 Total: -5.53 kcal Atomic # 7 Polarization: -25.57 SS G_CDS: 0.77 Total: -24.79 kcal Atomic # 8 Polarization: -25.52 SS G_CDS: -0.93 Total: -26.45 kcal Atomic # 14 Polarization: 20.76 SS G_CDS: -4.86 Total: 15.90 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.48 Total: -2.26 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -33.41 -6.06 -39.47 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000914640315.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.462 kcal (2) G-P(sol) polarization free energy of solvation -33.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.873 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.058 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.931 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds