Wall clock time and date at job start Mon Mar 30 2020 00:46:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09006 * 109.46716 * 2 1 4 4 O 1.42897 * 109.47256 * 240.00943 * 2 1 3 5 5 C 1.35930 * 117.00317 * 84.99418 * 4 2 1 6 6 C 1.38702 * 120.05894 * 354.51082 * 5 4 2 7 7 C 1.38153 * 119.95572 * 179.74237 * 6 5 4 8 8 C 1.38277 * 120.07873 * 0.53382 * 7 6 5 9 9 C 1.38256 * 120.11566 * 359.72313 * 8 7 6 10 10 C 1.38257 * 120.04088 * 0.02562 * 9 8 7 11 11 Cl 1.73604 * 120.03313 * 179.97438 * 10 9 8 12 12 C 1.50696 * 109.47517 * 120.00038 * 2 1 3 13 13 O 1.21213 * 119.99717 * 119.99912 * 12 2 1 14 14 O 1.34309 * 120.00330 * 300.28237 * 12 2 1 15 15 C 1.34916 * 117.00161 * 179.72209 * 14 12 2 16 16 H 1.08004 * 119.99975 * 359.97438 * 15 14 12 17 17 C 1.38750 * 120.00394 * 179.97438 * 15 14 12 18 18 N 1.31433 * 120.00475 * 179.97438 * 17 15 14 19 19 Si 1.86802 * 119.99578 * 0.02562 * 17 15 14 20 20 H 1.48504 * 109.47040 * 90.00075 * 19 17 15 21 21 H 1.48500 * 109.46963 * 209.99733 * 19 17 15 22 22 H 1.48497 * 109.47393 * 330.00062 * 19 17 15 23 23 H 1.09001 * 109.47710 * 59.99518 * 1 2 3 24 24 H 1.09005 * 109.46700 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47417 * 299.99266 * 1 2 3 26 26 H 1.08003 * 120.02093 * 0.02562 * 6 5 4 27 27 H 1.08000 * 119.96281 * 180.25578 * 7 6 5 28 28 H 1.07995 * 119.94690 * 179.74213 * 8 7 6 29 29 H 1.07995 * 119.97499 * 179.97438 * 9 8 7 30 30 H 0.96999 * 120.00192 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 8 2.0063 -0.6734 -1.1668 5 6 2.1124 0.0631 -2.3044 6 6 1.6592 1.3737 -2.3283 7 6 1.7730 2.1220 -3.4840 8 6 2.3280 1.5624 -4.6202 9 6 2.7759 0.2545 -4.6014 10 6 2.6692 -0.4971 -3.4459 11 17 3.2310 -2.1396 -3.4228 12 6 2.0324 -0.7104 1.2304 13 8 2.7293 -1.6959 1.1191 14 8 1.7033 -0.2549 2.4503 15 6 2.1814 -0.9403 3.5095 16 1 2.7984 -1.8130 3.3542 17 6 1.8803 -0.5241 4.7984 18 7 2.3456 -1.1921 5.8303 19 14 0.8125 0.9849 5.0671 20 1 -0.6139 0.5767 5.1322 21 1 1.1975 1.6432 6.3413 22 1 1.0048 1.9342 3.9415 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5137 0.8900 26 1 1.2219 1.8105 -1.4426 27 1 1.4239 3.1439 -3.5015 28 1 2.4121 2.1480 -5.5237 29 1 3.2086 -0.1804 -5.4902 30 1 2.1348 -0.9013 6.7314 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000914640315.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:06 Heat of formation + Delta-G solvation = -111.980213 kcal Electronic energy + Delta-G solvation = -18024.517258 eV Core-core repulsion = 14811.137492 eV Total energy + Delta-G solvation = -3213.379766 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.83645 -40.86651 -38.74817 -37.37392 -37.28731 -34.59691 -33.32980 -31.72146 -30.65604 -27.96424 -25.73713 -24.00518 -23.37639 -21.59628 -20.25336 -19.60968 -18.60296 -17.64245 -17.22895 -17.05114 -16.52136 -16.19032 -15.85134 -15.59560 -14.96440 -14.62183 -14.43525 -14.27805 -14.01188 -13.41120 -13.29043 -13.01844 -12.81156 -12.53950 -12.43929 -12.31803 -12.17820 -12.06639 -11.87770 -11.75013 -11.10560 -10.86756 -9.89225 -9.25161 -8.57831 -6.47383 0.14732 0.29745 1.16679 1.19810 1.31520 1.42602 1.52268 1.61625 2.26900 2.60632 2.64891 2.87121 3.54899 3.78825 3.79689 3.91129 4.10496 4.21830 4.35754 4.44646 4.62079 4.68137 4.79429 5.07982 5.13139 5.28216 5.39959 5.44812 5.69010 5.83165 6.17591 6.44774 6.75719 7.45404 8.55063 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.030029 B = 0.004897 C = 0.004361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 932.221618 B = 5716.162957 C = 6419.011259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.112 3.888 3 H 0.134 0.866 4 O -0.307 6.307 5 C 0.111 3.889 6 C -0.205 4.205 7 C -0.066 4.066 8 C -0.139 4.139 9 C -0.075 4.075 10 C -0.094 4.094 11 Cl -0.081 7.081 12 C 0.407 3.593 13 O -0.563 6.563 14 O -0.240 6.240 15 C -0.414 4.414 16 H 0.052 0.948 17 C 0.018 3.982 18 N -0.915 5.915 19 Si 0.986 3.014 20 H -0.256 1.256 21 H -0.266 1.266 22 H -0.241 1.241 23 H 0.109 0.891 24 H 0.059 0.941 25 H 0.098 0.902 26 H 0.157 0.843 27 H 0.169 0.831 28 H 0.169 0.831 29 H 0.157 0.843 30 H 0.291 0.709 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.703 12.635 -21.131 25.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C 0.055 3.945 3 H 0.151 0.849 4 O -0.221 6.221 5 C 0.065 3.935 6 C -0.224 4.224 7 C -0.084 4.084 8 C -0.157 4.157 9 C -0.094 4.094 10 C -0.121 4.121 11 Cl -0.052 7.052 12 C 0.253 3.747 13 O -0.458 6.458 14 O -0.150 6.150 15 C -0.489 4.489 16 H 0.070 0.930 17 C -0.183 4.183 18 N -0.555 5.555 19 Si 0.804 3.196 20 H -0.180 1.180 21 H -0.191 1.191 22 H -0.164 1.164 23 H 0.127 0.873 24 H 0.078 0.922 25 H 0.117 0.883 26 H 0.174 0.826 27 H 0.186 0.814 28 H 0.187 0.813 29 H 0.174 0.826 30 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -5.403 11.978 -20.879 24.670 hybrid contribution 0.334 -0.741 0.821 1.155 sum -5.069 11.237 -20.058 23.543 Atomic orbital electron populations 1.22340 0.89484 1.04360 1.06094 1.21659 0.97421 0.96076 0.79318 0.84911 1.86220 1.81525 1.38031 1.16362 1.19152 0.96967 0.91932 0.85436 1.21637 1.06119 0.92131 1.02497 1.21524 0.95035 1.00952 0.90877 1.21502 0.99716 0.94050 1.00403 1.21253 0.98172 0.94525 0.95438 1.20617 1.08087 0.88075 0.95339 1.98370 1.88178 1.19854 1.98789 1.23763 0.80523 0.84588 0.85800 1.90634 1.39078 1.28654 1.87420 1.83456 1.65360 1.52607 1.13528 1.20296 1.33672 1.11455 0.83521 0.92960 1.25645 0.98011 1.02333 0.92265 1.69702 1.44495 1.41573 0.99684 0.85057 0.78311 0.77094 0.79142 1.17989 1.19061 1.16415 0.87257 0.92195 0.88316 0.82601 0.81362 0.81336 0.82551 0.89860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -4.37 9.10 71.98 0.66 -3.72 16 2 C 0.11 3.85 2.75 29.85 0.08 3.93 16 3 H 0.13 3.61 6.31 -2.38 -0.02 3.60 16 4 O -0.31 -11.25 8.79 -73.72 -0.65 -11.90 16 5 C 0.11 3.15 6.59 22.52 0.15 3.30 16 6 C -0.21 -4.07 8.24 22.36 0.18 -3.88 16 7 C -0.07 -0.89 10.04 22.26 0.22 -0.67 16 8 C -0.14 -1.80 10.04 22.28 0.22 -1.58 16 9 C -0.08 -1.38 9.83 22.28 0.22 -1.17 16 10 C -0.09 -2.53 6.33 22.41 0.14 -2.38 16 11 Cl -0.08 -2.49 28.51 -2.72 -0.08 -2.56 16 12 C 0.41 20.13 7.28 71.23 0.52 20.65 16 13 O -0.56 -33.52 15.74 27.20 0.43 -33.09 16 14 O -0.24 -12.67 8.47 14.94 0.13 -12.54 16 15 C -0.41 -25.66 10.10 67.94 0.69 -24.97 16 16 H 0.05 3.76 7.09 -2.91 -0.02 3.73 16 17 C 0.02 1.02 5.49 84.88 0.47 1.49 16 18 N -0.92 -55.30 13.96 21.62 0.30 -54.99 16 19 Si 0.99 41.81 28.62 68.60 1.96 43.78 16 20 H -0.26 -10.16 7.11 99.48 0.71 -9.45 16 21 H -0.27 -10.58 7.11 99.48 0.71 -9.88 16 22 H -0.24 -9.44 7.11 99.48 0.71 -8.74 16 23 H 0.11 2.03 6.91 -2.39 -0.02 2.01 16 24 H 0.06 1.77 8.14 -2.38 -0.02 1.75 16 25 H 0.10 2.42 8.11 -2.39 -0.02 2.41 16 26 H 0.16 2.50 5.43 -2.91 -0.02 2.49 16 27 H 0.17 1.04 8.06 -2.91 -0.02 1.02 16 28 H 0.17 0.97 8.06 -2.91 -0.02 0.94 16 29 H 0.16 2.16 8.06 -2.91 -0.02 2.14 16 30 H 0.29 15.75 8.31 -92.71 -0.77 14.98 16 Total: -1.00 -80.12 285.68 6.82 -73.30 By element: Atomic # 1 Polarization: 5.83 SS G_CDS: 1.17 Total: 7.00 kcal Atomic # 6 Polarization: -12.54 SS G_CDS: 3.55 Total: -9.00 kcal Atomic # 7 Polarization: -55.30 SS G_CDS: 0.30 Total: -54.99 kcal Atomic # 8 Polarization: -57.43 SS G_CDS: -0.09 Total: -57.52 kcal Atomic # 14 Polarization: 41.81 SS G_CDS: 1.96 Total: 43.78 kcal Atomic # 17 Polarization: -2.49 SS G_CDS: -0.08 Total: -2.56 kcal Total: -80.12 6.82 -73.30 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000914640315.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.680 kcal (2) G-P(sol) polarization free energy of solvation -80.117 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -73.300 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.980 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds