Wall clock time and date at job start Mon Mar 30 2020 01:19:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.29892 * 118.97313 * 2 1 4 4 C 1.33963 * 122.82321 * 180.29681 * 3 2 1 5 5 Cl 1.73603 * 119.79724 * 179.72106 * 4 3 2 6 6 C 1.36308 * 120.40219 * 359.73885 * 4 3 2 7 7 N 1.40088 * 120.99354 * 179.97438 * 6 4 3 8 8 C 1.46909 * 118.01715 * 359.97438 * 6 4 3 9 9 N 1.31271 * 121.23265 * 180.02562 * 8 6 4 10 10 N 1.36699 * 118.97440 * 179.73855 * 2 1 3 11 11 C 1.34782 * 120.41385 * 359.97438 * 10 2 1 12 12 O 1.20825 * 120.00191 * 84.86425 * 11 10 2 13 13 C 1.50703 * 119.99332 * 264.86115 * 11 10 2 14 14 C 1.50703 * 109.46491 * 180.02562 * 13 11 10 15 15 H 1.08002 * 120.00334 * 359.97438 * 14 13 11 16 16 C 1.37884 * 119.99629 * 180.02562 * 14 13 11 17 17 N 1.31513 * 119.99725 * 359.97438 * 16 14 13 18 18 Si 1.86796 * 119.99577 * 179.97438 * 16 14 13 19 19 H 1.48499 * 109.47645 * 359.97438 * 18 16 14 20 20 H 1.48501 * 109.47032 * 120.00305 * 18 16 14 21 21 H 1.48503 * 109.47010 * 239.99645 * 18 16 14 22 22 H 1.08997 * 109.46780 * 275.10608 * 1 2 3 23 23 H 1.09002 * 109.46961 * 35.10786 * 1 2 3 24 24 H 1.08995 * 109.47108 * 155.10725 * 1 2 3 25 25 H 0.96998 * 120.00179 * 179.97438 * 7 6 4 26 26 H 0.97003 * 119.99940 * 359.97438 * 7 6 4 27 27 H 0.97005 * 120.00323 * 359.97150 * 9 8 6 28 28 H 1.08998 * 109.47301 * 60.00277 * 13 11 10 29 29 H 1.08999 * 109.47155 * 299.99687 * 13 11 10 30 30 H 0.96996 * 119.99421 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1362 1.1364 0.0000 4 6 3.4728 1.2263 -0.0058 5 17 4.2324 2.7874 -0.0127 6 6 4.2400 0.0997 -0.0068 7 7 5.6386 0.1793 -0.0134 8 6 3.5565 -1.2007 -0.0007 9 7 4.2333 -2.3255 -0.0007 10 7 2.1692 -1.1959 0.0055 11 6 1.4829 -2.3559 0.0113 12 8 1.0942 -2.8331 -1.0285 13 6 1.2004 -3.0575 1.3147 14 6 0.4251 -4.3218 1.0467 15 1 0.1628 -4.5900 0.0340 16 6 0.0497 -5.1354 2.0947 17 7 0.3687 -4.8084 3.3280 18 14 -0.9118 -6.7021 1.7626 19 1 -1.1432 -6.8409 0.3023 20 1 -0.1394 -7.8708 2.2552 21 1 -2.2180 -6.6398 2.4665 22 1 -0.3633 0.0915 1.0236 23 1 -0.3633 0.8407 -0.5910 24 1 -0.3633 -0.9321 -0.4325 25 1 6.1706 -0.6318 -0.0136 26 1 6.0751 1.0456 -0.0178 27 1 5.2032 -2.3080 -0.0052 28 1 0.6159 -2.4025 1.9608 29 1 2.1416 -3.3060 1.8050 30 1 0.1043 -5.3807 4.0652 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001143189507.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:19:17 Heat of formation + Delta-G solvation = 30.479087 kcal Electronic energy + Delta-G solvation = -18379.770046 eV Core-core repulsion = 15237.153282 eV Total energy + Delta-G solvation = -3142.616765 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.062 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.49246 -38.63187 -36.73213 -36.11529 -34.76435 -33.11074 -32.27843 -30.67671 -29.20633 -27.05343 -25.12512 -23.23100 -22.39054 -20.47129 -19.07584 -17.33020 -16.91093 -16.52807 -16.11152 -15.98484 -15.66009 -14.70871 -14.52474 -13.86486 -13.80286 -13.22289 -13.06402 -12.38644 -12.36502 -12.24043 -11.45527 -11.38829 -11.33533 -10.95457 -10.84459 -10.77244 -10.33872 -10.15557 -9.84317 -9.48876 -9.29335 -8.96967 -8.54912 -7.07241 -6.16881 -4.19619 0.78969 1.86981 1.87768 2.25171 2.54275 3.27761 3.35519 3.42165 3.44377 3.45241 4.04217 4.37016 4.66845 4.76926 5.20415 5.21458 5.41065 5.60282 5.72778 5.97441 6.07863 6.28279 6.92797 6.97029 7.12950 7.17786 7.36296 7.76266 7.88382 7.95670 8.14867 8.25737 8.88544 9.45976 10.94839 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.033373 B = 0.005021 C = 0.004746 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 838.805149 B = 5574.887172 C = 5898.453414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C 0.394 3.606 3 N -0.512 5.512 4 C 0.088 3.912 5 Cl -0.042 7.042 6 C 0.093 3.907 7 N -0.853 5.853 8 C 0.432 3.568 9 N -0.726 5.726 10 N -0.522 5.522 11 C 0.556 3.444 12 O -0.439 6.439 13 C 0.004 3.996 14 C -0.519 4.519 15 H 0.076 0.924 16 C 0.061 3.939 17 N -0.894 5.894 18 Si 0.903 3.097 19 H -0.270 1.270 20 H -0.283 1.283 21 H -0.282 1.282 22 H 0.104 0.896 23 H 0.103 0.897 24 H 0.090 0.910 25 H 0.398 0.602 26 H 0.409 0.591 27 H 0.349 0.651 28 H 0.059 0.941 29 H 0.067 0.933 30 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.740 12.900 -4.332 15.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.129 3.871 3 N -0.234 5.234 4 C -0.063 4.063 5 Cl -0.014 7.014 6 C -0.022 4.022 7 N -0.398 5.398 8 C 0.155 3.845 9 N -0.357 5.357 10 N -0.246 5.246 11 C 0.349 3.651 12 O -0.301 6.301 13 C -0.035 4.035 14 C -0.558 4.558 15 H 0.094 0.906 16 C -0.141 4.141 17 N -0.533 5.533 18 Si 0.730 3.270 19 H -0.194 1.194 20 H -0.209 1.209 21 H -0.208 1.208 22 H 0.122 0.878 23 H 0.122 0.878 24 H 0.108 0.892 25 H 0.228 0.772 26 H 0.240 0.760 27 H 0.167 0.833 28 H 0.077 0.923 29 H 0.085 0.915 30 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 5.932 12.269 -4.776 14.440 hybrid contribution 1.501 -0.468 0.035 1.572 sum 7.433 11.801 -4.741 14.730 Atomic orbital electron populations 1.21004 0.84389 1.05535 1.05737 1.22789 0.95754 0.78134 0.90436 1.66748 1.08200 1.24006 1.24470 1.19980 0.88893 0.85168 1.12273 1.98336 1.78764 1.27222 1.97103 1.19621 0.86254 0.91939 1.04341 1.42104 1.01456 1.11483 1.84728 1.19423 0.83874 0.87864 0.93354 1.69728 1.14345 1.24341 1.27331 1.44443 1.04498 1.09469 1.66215 1.22777 0.72037 0.76034 0.94206 1.90440 1.42582 1.60370 1.36748 1.19588 1.00116 0.96160 0.87682 1.21101 1.34963 1.05101 0.94595 0.90610 1.24978 0.95963 0.98344 0.94821 1.69965 1.46252 1.38390 0.98660 0.86348 0.79410 0.82529 0.78707 1.19386 1.20874 1.20826 0.87757 0.87824 0.89153 0.77241 0.75957 0.83280 0.92287 0.91511 0.92676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.43 9.77 36.01 0.35 -1.08 16 2 C 0.39 6.44 7.58 -154.38 -1.17 5.27 16 3 N -0.51 -8.14 10.16 -7.41 -0.08 -8.21 16 4 C 0.09 1.32 7.28 -17.32 -0.13 1.19 16 5 Cl -0.04 -0.52 27.76 -51.86 -1.44 -1.96 16 6 C 0.09 1.37 6.99 -81.27 -0.57 0.80 16 7 N -0.85 -9.03 9.06 33.67 0.31 -8.73 16 8 C 0.43 7.70 7.69 -153.07 -1.18 6.52 16 9 N -0.73 -13.24 13.44 32.59 0.44 -12.80 16 10 N -0.52 -9.83 2.75 -57.09 -0.16 -9.99 16 11 C 0.56 12.19 4.13 -10.98 -0.05 12.15 16 12 O -0.44 -10.53 15.90 5.94 0.09 -10.43 16 13 C 0.00 0.10 5.54 -29.03 -0.16 -0.06 16 14 C -0.52 -14.23 8.92 -34.44 -0.31 -14.54 16 15 H 0.08 2.13 6.76 -52.49 -0.35 1.78 16 16 C 0.06 1.67 5.46 -17.82 -0.10 1.57 16 17 N -0.89 -25.29 13.29 55.43 0.74 -24.55 16 18 Si 0.90 21.18 29.54 -169.99 -5.02 16.16 16 19 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 20 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 21 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 22 H 0.10 1.23 8.14 -51.93 -0.42 0.80 16 23 H 0.10 1.10 8.14 -51.93 -0.42 0.68 16 24 H 0.09 1.33 6.53 -51.93 -0.34 0.99 16 25 H 0.40 3.55 7.37 -40.82 -0.30 3.25 16 26 H 0.41 3.61 7.53 -40.82 -0.31 3.31 16 27 H 0.35 5.10 7.28 -40.82 -0.30 4.80 16 28 H 0.06 1.43 8.14 -51.93 -0.42 1.00 16 29 H 0.07 1.77 8.14 -51.93 -0.42 1.35 16 30 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 LS Contribution 282.93 15.07 4.26 4.26 Total: -1.00 -31.34 282.93 -6.58 -37.92 By element: Atomic # 1 Polarization: 8.92 SS G_CDS: -2.42 Total: 6.49 kcal Atomic # 6 Polarization: 15.13 SS G_CDS: -3.30 Total: 11.83 kcal Atomic # 7 Polarization: -65.53 SS G_CDS: 1.25 Total: -64.28 kcal Atomic # 8 Polarization: -10.53 SS G_CDS: 0.09 Total: -10.43 kcal Atomic # 14 Polarization: 21.18 SS G_CDS: -5.02 Total: 16.16 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.44 Total: -1.96 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -31.34 -6.58 -37.92 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001143189507.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.404 kcal (2) G-P(sol) polarization free energy of solvation -31.344 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.060 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds