Wall clock time and date at job start Mon Mar 30 2020 01:08:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35814 * 116.99612 * 2 1 4 4 C 1.39034 * 120.86444 * 0.20582 * 3 2 1 5 5 C 1.38216 * 119.15751 * 180.24887 * 4 3 2 6 6 Cl 1.73600 * 119.53898 * 179.76643 * 5 4 3 7 7 N 1.32027 * 120.92410 * 359.79467 * 5 4 3 8 8 C 1.31968 * 121.89514 * 359.96833 * 7 5 4 9 9 C 1.38532 * 120.74035 * 0.02562 * 8 7 5 10 10 N 1.40204 * 120.49633 * 179.97438 * 9 8 7 11 11 C 1.34776 * 120.00373 * 24.72332 * 10 9 8 12 12 O 1.21294 * 119.99747 * 5.55346 * 11 10 9 13 13 C 1.50706 * 120.00037 * 185.55324 * 11 10 9 14 14 C 1.50702 * 109.46774 * 179.97438 * 13 11 10 15 15 H 1.08001 * 120.00290 * 0.02562 * 14 13 11 16 16 C 1.37882 * 119.99588 * 179.97438 * 14 13 11 17 17 N 1.31513 * 120.00286 * 0.02562 * 16 14 13 18 18 Si 1.86801 * 119.99730 * 180.02562 * 16 14 13 19 19 H 1.48501 * 109.47168 * 90.00247 * 18 16 14 20 20 H 1.48502 * 109.46809 * 210.00433 * 18 16 14 21 21 H 1.48504 * 109.47196 * 330.00345 * 18 16 14 22 22 H 1.09003 * 109.47499 * 299.99575 * 1 2 3 23 23 H 1.08998 * 109.47096 * 60.00051 * 1 2 3 24 24 H 1.09009 * 109.46999 * 179.97438 * 1 2 3 25 25 H 1.07999 * 120.42068 * 0.02562 * 4 3 2 26 26 H 1.07997 * 119.62830 * 179.97438 * 8 7 5 27 27 H 0.97002 * 119.99957 * 204.45500 * 10 9 8 28 28 H 1.08999 * 109.46703 * 299.99616 * 13 11 10 29 29 H 1.08997 * 109.46919 * 60.00145 * 13 11 10 30 30 H 0.96993 * 120.00500 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0455 1.2102 0.0000 4 6 1.3059 2.3874 0.0043 5 6 1.9697 3.5998 -0.0011 6 17 1.0560 5.0758 -0.0020 7 7 3.2890 3.6509 -0.0062 8 6 4.0291 2.5584 -0.0057 9 6 3.4406 1.3043 -0.0003 10 7 4.2319 0.1469 -0.0004 11 6 5.4893 0.1902 0.4829 12 8 5.9021 1.2019 1.0095 13 6 6.3823 -1.0185 0.3692 14 6 7.7246 -0.7105 0.9810 15 1 7.9122 0.2628 1.4097 16 6 8.7130 -1.6719 0.9943 17 7 8.4844 -2.8573 0.4727 18 14 10.3767 -1.2904 1.7533 19 1 10.3564 -1.6463 3.1949 20 1 11.4282 -2.0799 1.0632 21 1 10.6679 0.1582 1.6052 22 1 -0.3634 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0278 -0.0005 25 1 0.2264 2.3550 0.0081 26 1 5.1058 2.6429 -0.0103 27 1 3.8731 -0.6859 -0.3447 28 1 5.9267 -1.8575 0.8951 29 1 6.5129 -1.2760 -0.6819 30 1 9.1798 -3.5334 0.4817 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001143193978.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:08:00 Heat of formation + Delta-G solvation = -44.736062 kcal Electronic energy + Delta-G solvation = -17780.232616 eV Core-core repulsion = 14602.061527 eV Total energy + Delta-G solvation = -3178.171089 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.05421 -39.04922 -38.28382 -36.60810 -34.56282 -33.06258 -31.44912 -30.35388 -28.61339 -27.70636 -24.33413 -23.30196 -22.68711 -20.06491 -18.73944 -17.73013 -17.12460 -16.29710 -16.10399 -15.73848 -15.35054 -14.79161 -14.58405 -14.41866 -14.20750 -13.96452 -13.03121 -12.86555 -12.27071 -12.17644 -11.90332 -11.57654 -11.36415 -11.32302 -10.85466 -10.75540 -10.39115 -10.05007 -9.71851 -9.39034 -9.27481 -8.92849 -8.51479 -7.86859 -6.14086 -4.14896 0.88013 1.12793 1.75859 2.81941 3.24519 3.31709 3.36467 3.38709 3.48036 3.75799 4.42053 4.44604 4.58530 4.78507 4.85526 4.88977 5.17425 5.24658 5.29786 5.38799 5.53435 6.03015 6.26600 6.65598 6.97367 7.06367 7.16218 7.70465 7.78370 7.89188 8.18378 8.81326 8.95865 9.50807 10.98056 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.029197 B = 0.004230 C = 0.003740 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 958.781201 B = 6617.821373 C = 7485.734929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.305 6.305 3 C 0.135 3.865 4 C -0.223 4.223 5 C 0.176 3.824 6 Cl -0.040 7.040 7 N -0.475 5.475 8 C 0.132 3.868 9 C 0.099 3.901 10 N -0.672 5.672 11 C 0.515 3.485 12 O -0.520 6.520 13 C 0.009 3.991 14 C -0.513 4.513 15 H 0.077 0.923 16 C 0.057 3.943 17 N -0.899 5.899 18 Si 0.903 3.097 19 H -0.280 1.280 20 H -0.286 1.286 21 H -0.271 1.271 22 H 0.059 0.941 23 H 0.059 0.941 24 H 0.105 0.895 25 H 0.148 0.852 26 H 0.196 0.804 27 H 0.415 0.585 28 H 0.053 0.947 29 H 0.056 0.944 30 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.317 6.114 -3.220 19.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.216 6.216 3 C 0.079 3.921 4 C -0.246 4.246 5 C 0.010 3.990 6 Cl -0.011 7.011 7 N -0.189 5.189 8 C -0.027 4.027 9 C -0.001 4.001 10 N -0.318 5.318 11 C 0.308 3.692 12 O -0.394 6.394 13 C -0.031 4.031 14 C -0.552 4.552 15 H 0.096 0.904 16 C -0.144 4.144 17 N -0.538 5.538 18 Si 0.731 3.269 19 H -0.206 1.206 20 H -0.212 1.212 21 H -0.195 1.195 22 H 0.077 0.923 23 H 0.077 0.923 24 H 0.124 0.876 25 H 0.166 0.834 26 H 0.212 0.788 27 H 0.251 0.749 28 H 0.071 0.929 29 H 0.073 0.927 30 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -17.430 7.305 -2.876 19.116 hybrid contribution -0.238 -0.919 0.222 0.975 sum -17.668 6.386 -2.654 18.973 Atomic orbital electron populations 1.23160 0.77535 1.04539 1.01688 1.86070 1.22045 1.25154 1.88326 1.18876 0.90530 0.85019 0.97676 1.21566 1.01444 0.90334 1.11227 1.21211 0.89879 0.86733 1.01190 1.98379 1.70985 1.35102 1.96668 1.67184 1.04901 1.32505 1.14298 1.23209 1.01508 0.83804 0.94146 1.18597 0.87303 0.90372 1.03808 1.44093 1.14546 1.10310 1.62804 1.22499 0.79835 0.92460 0.74453 1.90513 1.73265 1.34085 1.41516 1.19295 0.93829 0.89719 1.00216 1.21126 0.95454 1.00325 1.38281 0.90447 1.24998 0.99235 0.94833 0.95357 1.69945 1.34307 1.04266 1.45303 0.86397 0.82765 0.78622 0.79149 1.20558 1.21217 1.19539 0.92254 0.92282 0.87620 0.83404 0.78759 0.74854 0.92884 0.92666 0.92740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.18 9.84 101.05 0.99 1.17 16 2 O -0.30 -3.55 10.02 -19.16 -0.19 -3.74 16 3 C 0.13 1.83 6.75 -38.69 -0.26 1.57 16 4 C -0.22 -2.71 8.87 -39.29 -0.35 -3.06 16 5 C 0.18 2.49 7.27 -17.48 -0.13 2.36 16 6 Cl -0.04 -0.48 29.10 -51.86 -1.51 -1.98 16 7 N -0.47 -7.93 10.33 -10.28 -0.11 -8.04 16 8 C 0.13 2.30 9.90 -17.38 -0.17 2.12 16 9 C 0.10 1.62 6.47 -83.33 -0.54 1.08 16 10 N -0.67 -11.38 5.32 -9.64 -0.05 -11.43 16 11 C 0.52 10.93 7.64 -10.98 -0.08 10.85 16 12 O -0.52 -12.37 12.66 5.55 0.07 -12.30 16 13 C 0.01 0.20 5.46 -29.03 -0.16 0.04 16 14 C -0.51 -14.20 8.92 -34.44 -0.31 -14.51 16 15 H 0.08 2.22 6.75 -52.49 -0.35 1.87 16 16 C 0.06 1.58 5.46 -17.82 -0.10 1.48 16 17 N -0.90 -25.48 13.29 55.43 0.74 -24.75 16 18 Si 0.90 21.52 29.54 -169.99 -5.02 16.50 16 19 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 20 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 21 H -0.27 -6.45 7.11 56.52 0.40 -6.04 16 22 H 0.06 0.37 7.70 -51.93 -0.40 -0.03 16 23 H 0.06 0.34 7.72 -51.93 -0.40 -0.06 16 24 H 0.11 0.53 8.14 -51.92 -0.42 0.11 16 25 H 0.15 1.31 6.46 -52.49 -0.34 0.97 16 26 H 0.20 3.71 5.79 -52.49 -0.30 3.40 16 27 H 0.42 6.00 8.42 -40.82 -0.34 5.65 16 28 H 0.05 1.28 8.14 -51.93 -0.42 0.85 16 29 H 0.06 1.32 8.14 -51.93 -0.42 0.90 16 30 H 0.26 7.07 8.31 -40.82 -0.34 6.74 16 LS Contribution 283.73 15.07 4.28 4.28 Total: -1.00 -31.03 283.73 -5.44 -36.48 By element: Atomic # 1 Polarization: 4.42 SS G_CDS: -2.55 Total: 1.87 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: -1.10 Total: 3.11 kcal Atomic # 7 Polarization: -44.79 SS G_CDS: 0.58 Total: -44.21 kcal Atomic # 8 Polarization: -15.92 SS G_CDS: -0.12 Total: -16.04 kcal Atomic # 14 Polarization: 21.52 SS G_CDS: -5.02 Total: 16.50 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.51 Total: -1.98 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -31.03 -5.44 -36.48 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001143193978.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.259 kcal (2) G-P(sol) polarization free energy of solvation -31.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.477 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds