Wall clock time and date at job start Mon Mar 30 2020 01:05:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45198 * 109.47309 * 2 1 4 4 C 1.34675 * 116.99909 * 180.02562 * 3 2 1 5 5 O 1.21438 * 119.99838 * 359.97438 * 4 3 2 6 6 C 1.48048 * 119.99949 * 180.02562 * 4 3 2 7 7 C 1.40020 * 120.87964 * 359.97438 * 6 4 3 8 8 C 1.38222 * 119.16610 * 180.02562 * 7 6 4 9 9 Cl 1.73603 * 119.51041 * 179.97438 * 8 7 6 10 10 N 1.31936 * 120.97739 * 359.72500 * 8 7 6 11 11 C 1.32446 * 121.93398 * 0.56924 * 10 8 7 12 12 N 1.38835 * 119.63710 * 179.70990 * 11 10 8 13 13 C 1.36884 * 120.00183 * 179.72442 * 12 11 10 14 14 H 1.07995 * 119.99944 * 0.27748 * 13 12 11 15 15 C 1.38835 * 119.99767 * 179.97438 * 13 12 11 16 16 N 1.31550 * 120.00453 * 0.02562 * 15 13 12 17 17 Si 1.86803 * 119.99557 * 180.02562 * 15 13 12 18 18 H 1.48500 * 109.46986 * 90.00480 * 17 15 13 19 19 H 1.48496 * 109.47029 * 210.00496 * 17 15 13 20 20 H 1.48499 * 109.47352 * 330.00326 * 17 15 13 21 21 C 1.39159 * 120.72667 * 359.42850 * 11 10 8 22 22 H 1.09004 * 109.47285 * 300.00558 * 1 2 3 23 23 H 1.09005 * 109.46899 * 60.00091 * 1 2 3 24 24 H 1.08995 * 109.47613 * 180.02562 * 1 2 3 25 25 H 1.09002 * 109.46781 * 239.99374 * 2 1 3 26 26 H 1.08997 * 109.47053 * 120.00183 * 2 1 3 27 27 H 1.08003 * 120.41899 * 0.04652 * 7 6 4 28 28 H 0.96999 * 119.99837 * 359.72611 * 12 11 10 29 29 H 0.97000 * 120.00419 * 179.97438 * 16 15 13 30 30 H 1.07996 * 120.52718 * 180.29426 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3492 1.5453 -0.0005 5 8 4.0888 0.5822 -0.0005 6 6 3.9151 2.9134 0.0000 7 6 3.0793 4.0368 0.0005 8 6 3.6457 5.2977 0.0005 9 17 2.6178 6.6967 0.0005 10 7 4.9558 5.4537 0.0054 11 6 5.7843 4.4204 -0.0006 12 7 7.1552 4.6397 -0.0012 13 6 8.0184 3.5773 -0.0017 14 1 7.6329 2.5685 -0.0062 15 6 9.3893 3.7967 -0.0027 16 7 9.8588 5.0256 -0.0028 17 14 10.5671 2.3468 -0.0042 18 1 10.8781 1.9631 -1.4046 19 1 11.8208 2.7269 0.6950 20 1 9.9387 1.1978 0.6960 21 6 5.2959 3.1173 -0.0006 22 1 -0.3634 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 1.8933 -0.5139 -0.8900 26 1 1.8933 -0.5138 0.8899 27 1 2.0057 3.9196 0.0013 28 1 7.5014 5.5458 -0.0012 29 1 10.8166 5.1789 -0.0031 30 1 5.9745 2.2772 -0.0007 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155530687.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:36 Heat of formation + Delta-G solvation = -58.104889 kcal Electronic energy + Delta-G solvation = -17649.199922 eV Core-core repulsion = 14470.449117 eV Total energy + Delta-G solvation = -3178.750805 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.31464 -39.08823 -36.41515 -36.25866 -35.31191 -32.54634 -31.92007 -31.35869 -28.59673 -25.31819 -24.96255 -22.78619 -21.99527 -20.72065 -18.27580 -17.87608 -16.98781 -16.40973 -15.93427 -15.25631 -14.88433 -14.58946 -14.21776 -13.91834 -13.68279 -13.63923 -13.21457 -12.78766 -11.99922 -11.96786 -11.90147 -11.66624 -11.37020 -11.24473 -10.80522 -10.56670 -10.54828 -10.47829 -10.37515 -10.31361 -9.31630 -8.85279 -8.82568 -7.28043 -6.87763 -4.07045 1.23160 1.92467 2.37792 2.80147 2.95827 3.05165 3.08691 3.11334 3.81797 4.36554 4.65247 4.83077 4.86893 4.94955 4.96794 5.20559 5.56489 5.68881 5.81854 5.84532 5.86557 5.94859 6.14827 6.38477 6.62985 6.75291 7.04855 7.11728 7.47897 7.99525 8.24088 8.57854 8.96566 9.31229 10.26656 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.014710 B = 0.005923 C = 0.004236 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1902.974037 B = 4725.802837 C = 6608.329475 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.061 3.939 3 O -0.350 6.350 4 C 0.518 3.482 5 O -0.505 6.505 6 C -0.027 4.027 7 C -0.255 4.255 8 C 0.247 3.753 9 Cl -0.062 7.062 10 N -0.561 5.561 11 C 0.361 3.639 12 N -0.507 5.507 13 C -0.307 4.307 14 H 0.111 0.889 15 C 0.031 3.969 16 N -0.869 5.869 17 Si 0.940 3.060 18 H -0.272 1.272 19 H -0.278 1.278 20 H -0.263 1.263 21 C -0.178 4.178 22 H 0.067 0.933 23 H 0.067 0.933 24 H 0.077 0.923 25 H 0.069 0.931 26 H 0.069 0.931 27 H 0.134 0.866 28 H 0.409 0.591 29 H 0.282 0.718 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.441 -5.502 -0.006 13.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.013 4.013 3 O -0.267 6.267 4 C 0.362 3.638 5 O -0.393 6.393 6 C -0.036 4.036 7 C -0.284 4.284 8 C 0.077 3.923 9 Cl -0.034 7.034 10 N -0.285 5.285 11 C 0.116 3.884 12 N -0.110 5.110 13 C -0.437 4.437 14 H 0.129 0.871 15 C -0.177 4.177 16 N -0.503 5.503 17 Si 0.765 3.235 18 H -0.197 1.197 19 H -0.203 1.203 20 H -0.187 1.187 21 C -0.206 4.206 22 H 0.086 0.914 23 H 0.086 0.914 24 H 0.096 0.904 25 H 0.087 0.913 26 H 0.087 0.913 27 H 0.152 0.848 28 H 0.246 0.754 29 H 0.093 0.907 30 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -11.381 -4.932 0.006 12.404 hybrid contribution 0.409 -0.942 -0.014 1.027 sum -10.972 -5.875 -0.008 12.446 Atomic orbital electron populations 1.21795 0.92722 1.02712 1.03620 1.23002 0.95249 0.80510 1.02570 1.86574 1.24028 1.31800 1.84290 1.21264 0.80262 0.89857 0.72369 1.90807 1.60439 1.42416 1.45629 1.18717 0.93115 0.88935 1.02794 1.20894 1.00085 0.89624 1.17838 1.20680 0.88343 0.86022 0.97301 1.98339 1.64722 1.43598 1.96730 1.65996 1.02908 1.34703 1.24938 1.17629 0.85416 0.87300 0.98042 1.40928 0.99737 1.10433 1.59951 1.19919 0.86925 0.88394 1.48498 0.87112 1.25466 0.97817 0.98449 0.95951 1.69688 1.15863 1.19967 1.44807 0.85691 0.78947 0.79894 0.79011 1.19700 1.20283 1.18742 1.21328 0.93430 0.97565 1.08277 0.91427 0.91422 0.90441 0.91280 0.91280 0.84832 0.75420 0.90739 0.83799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.25 10.29 37.16 0.38 -0.86 16 2 C 0.06 0.70 6.19 37.16 0.23 0.93 16 3 O -0.35 -5.30 9.57 -40.42 -0.39 -5.68 16 4 C 0.52 9.35 7.92 34.75 0.28 9.63 16 5 O -0.50 -10.03 16.23 -19.22 -0.31 -10.34 16 6 C -0.03 -0.53 5.90 -104.70 -0.62 -1.15 16 7 C -0.26 -4.68 9.46 -38.92 -0.37 -5.05 16 8 C 0.25 4.85 7.27 -17.51 -0.13 4.72 16 9 Cl -0.06 -1.03 29.10 -51.86 -1.51 -2.54 16 10 N -0.56 -12.45 10.34 -9.59 -0.10 -12.55 16 11 C 0.36 8.29 7.61 -155.14 -1.18 7.11 16 12 N -0.51 -12.32 5.44 -11.18 -0.06 -12.39 16 13 C -0.31 -7.52 9.54 -15.08 -0.14 -7.66 16 14 H 0.11 2.60 5.64 -52.49 -0.30 2.31 16 15 C 0.03 0.74 5.50 -17.45 -0.10 0.64 16 16 N -0.87 -21.99 13.05 55.49 0.72 -21.26 16 17 Si 0.94 18.78 29.55 -169.99 -5.02 13.76 16 18 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 19 H -0.28 -5.50 7.11 56.52 0.40 -5.10 16 20 H -0.26 -5.19 7.11 56.52 0.40 -4.79 16 21 C -0.18 -3.84 8.90 -38.74 -0.34 -4.18 16 22 H 0.07 0.55 8.14 -51.93 -0.42 0.12 16 23 H 0.07 0.55 8.14 -51.93 -0.42 0.12 16 24 H 0.08 0.47 8.14 -51.93 -0.42 0.05 16 25 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 26 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 27 H 0.13 2.14 7.71 -52.48 -0.40 1.73 16 28 H 0.41 10.26 8.01 -40.82 -0.33 9.94 16 29 H 0.28 6.68 8.31 -40.82 -0.34 6.34 16 30 H 0.14 3.14 5.62 -52.49 -0.29 2.85 16 LS Contribution 289.19 15.07 4.36 4.36 Total: -1.00 -26.36 289.19 -6.87 -33.23 By element: Atomic # 1 Polarization: 11.86 SS G_CDS: -2.57 Total: 9.29 kcal Atomic # 6 Polarization: 6.11 SS G_CDS: -1.99 Total: 4.12 kcal Atomic # 7 Polarization: -46.76 SS G_CDS: 0.56 Total: -46.20 kcal Atomic # 8 Polarization: -15.32 SS G_CDS: -0.70 Total: -16.02 kcal Atomic # 14 Polarization: 18.78 SS G_CDS: -5.02 Total: 13.76 kcal Atomic # 17 Polarization: -1.03 SS G_CDS: -1.51 Total: -2.54 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -26.36 -6.87 -33.23 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155530687.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.875 kcal (2) G-P(sol) polarization free energy of solvation -26.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds