Wall clock time and date at job start Mon Mar 30 2020 01:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45202 * 109.47210 * 2 1 4 4 C 1.34778 * 116.99741 * 179.97438 * 3 2 1 5 5 O 1.21531 * 120.00450 * 0.02562 * 4 3 2 6 6 C 1.47261 * 119.99974 * 179.97438 * 4 3 2 7 7 C 1.39592 * 120.62891 * 354.31260 * 6 4 3 8 8 N 1.31612 * 120.63956 * 179.97438 * 7 6 4 9 9 C 1.32298 * 122.13957 * 0.02562 * 8 7 6 10 10 Cl 1.73592 * 119.39917 * 180.02562 * 9 8 7 11 11 C 1.38006 * 121.20804 * 359.97438 * 9 8 7 12 12 C 1.39482 * 119.19116 * 0.28459 * 11 9 8 13 13 N 1.38322 * 120.95959 * 179.70184 * 12 11 9 14 14 C 1.36833 * 119.99753 * 5.92744 * 13 12 11 15 15 H 1.08001 * 119.99669 * 359.97438 * 14 13 12 16 16 C 1.38895 * 119.99776 * 180.02562 * 14 13 12 17 17 N 1.31505 * 120.00216 * 359.97438 * 16 14 13 18 18 Si 1.86805 * 120.00028 * 179.97438 * 16 14 13 19 19 H 1.48496 * 109.46736 * 0.02562 * 18 16 14 20 20 H 1.48497 * 109.47027 * 119.99366 * 18 16 14 21 21 H 1.48497 * 109.47245 * 239.99915 * 18 16 14 22 22 H 1.09002 * 109.46641 * 59.99833 * 1 2 3 23 23 H 1.08996 * 109.47113 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.47089 * 300.00362 * 1 2 3 25 25 H 1.08998 * 109.47089 * 239.99638 * 2 1 3 26 26 H 1.09005 * 109.47124 * 120.00002 * 2 1 3 27 27 H 1.07995 * 119.67513 * 0.02562 * 7 6 4 28 28 H 1.07999 * 120.40420 * 180.02562 * 11 9 8 29 29 H 0.97001 * 120.00227 * 185.91953 * 13 12 11 30 30 H 0.96998 * 119.99473 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3502 1.5455 0.0005 5 8 4.0905 0.5817 0.0005 6 6 3.9131 2.9062 0.0000 7 6 3.0806 4.0203 -0.1201 8 7 3.5834 5.2365 -0.1201 9 6 4.8824 5.4611 -0.0086 10 17 5.4685 7.0950 -0.0162 11 6 5.7800 4.4201 0.1147 12 6 5.3050 3.1086 0.1154 13 7 6.1726 2.0376 0.2307 14 6 7.5023 2.2568 0.4678 15 1 7.8744 3.2661 0.5645 16 6 8.3737 1.1813 0.5830 17 7 7.9207 -0.0476 0.4648 18 14 10.1891 1.4805 0.9060 19 1 10.4413 2.9410 0.9978 20 1 10.5784 0.8303 2.1830 21 1 10.9905 0.9081 -0.2054 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8899 25 1 1.8933 -0.5139 -0.8899 26 1 1.8933 -0.5139 0.8900 27 1 2.0135 3.8827 -0.2131 28 1 6.8378 4.6183 0.2054 29 1 5.8385 1.1311 0.1436 30 1 8.5292 -0.7986 0.5456 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155531509.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:39 Heat of formation + Delta-G solvation = -66.238593 kcal Electronic energy + Delta-G solvation = -18066.046985 eV Core-core repulsion = 14886.943476 eV Total energy + Delta-G solvation = -3179.103509 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.04836 -38.71966 -36.53099 -35.84297 -35.49663 -32.66164 -31.68224 -30.24808 -29.42935 -25.44531 -24.24964 -22.69874 -21.66023 -20.71389 -18.22913 -17.45375 -17.17295 -16.11178 -16.05104 -15.31502 -14.96655 -14.02561 -13.96375 -13.75358 -13.69506 -13.32796 -12.89040 -12.61424 -12.08419 -12.02553 -11.67517 -11.55352 -11.37082 -11.21661 -10.96977 -10.76119 -10.65761 -10.62099 -10.15868 -9.67967 -9.33714 -8.66980 -8.27474 -7.52126 -7.03106 -4.21129 1.39446 2.35924 2.52325 2.95642 2.98091 3.01498 3.23418 3.27158 3.71356 4.41146 4.86754 4.88249 5.10051 5.14338 5.31863 5.37748 5.49350 5.84506 5.90335 5.98645 6.02391 6.08866 6.46425 6.47973 6.74620 6.90097 6.98110 7.24331 7.44714 8.28518 8.47903 8.73335 8.86560 9.15611 10.07635 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.011449 B = 0.008045 C = 0.004748 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2445.022433 B = 3479.621681 C = 5895.787089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.063 3.937 3 O -0.361 6.361 4 C 0.516 3.484 5 O -0.533 6.533 6 C -0.324 4.324 7 C 0.234 3.766 8 N -0.583 5.583 9 C 0.214 3.786 10 Cl -0.067 7.067 11 C -0.227 4.227 12 C 0.221 3.779 13 N -0.470 5.470 14 C -0.314 4.314 15 H 0.114 0.886 16 C 0.033 3.967 17 N -0.843 5.843 18 Si 0.943 3.057 19 H -0.259 1.259 20 H -0.273 1.273 21 H -0.273 1.273 22 H 0.065 0.935 23 H 0.074 0.926 24 H 0.065 0.935 25 H 0.065 0.935 26 H 0.065 0.935 27 H 0.155 0.845 28 H 0.137 0.863 29 H 0.426 0.574 30 H 0.286 0.714 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.404 1.918 -0.313 6.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.011 4.011 3 O -0.279 6.279 4 C 0.366 3.634 5 O -0.424 6.424 6 C -0.338 4.338 7 C 0.072 3.928 8 N -0.303 5.303 9 C 0.061 3.939 10 Cl -0.039 7.039 11 C -0.254 4.254 12 C 0.082 3.918 13 N -0.073 5.073 14 C -0.446 4.446 15 H 0.132 0.868 16 C -0.178 4.178 17 N -0.474 5.474 18 Si 0.767 3.233 19 H -0.183 1.183 20 H -0.198 1.198 21 H -0.198 1.198 22 H 0.084 0.916 23 H 0.093 0.907 24 H 0.084 0.916 25 H 0.084 0.916 26 H 0.084 0.916 27 H 0.173 0.827 28 H 0.154 0.846 29 H 0.274 0.726 30 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -6.271 2.079 -0.336 6.615 hybrid contribution 1.361 -1.128 0.183 1.777 sum -4.909 0.951 -0.154 5.003 Atomic orbital electron populations 1.21781 0.93194 1.02437 1.03299 1.22864 0.94700 0.81191 1.02357 1.86519 1.24692 1.31165 1.85525 1.20890 0.79755 0.89603 0.73129 1.90603 1.59164 1.42777 1.49838 1.18791 0.92447 0.90674 1.31913 1.22278 0.98510 0.85303 0.86706 1.66843 1.12780 1.24037 1.26661 1.21040 0.90394 0.84785 0.97702 1.98327 1.87017 1.21856 1.96703 1.20849 1.00218 0.89749 1.14547 1.17319 0.87664 0.88072 0.98785 1.42087 1.06577 1.08681 1.49991 1.20233 0.82857 0.95878 1.45612 0.86805 1.25705 1.02352 0.94341 0.95402 1.69753 1.37786 0.98808 1.41016 0.85586 0.79386 0.79678 0.78636 1.18314 1.19792 1.19774 0.91641 0.90740 0.91632 0.91637 0.91620 0.82747 0.84557 0.72604 0.90319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.53 10.29 37.16 0.38 -1.15 16 2 C 0.06 0.90 6.20 37.16 0.23 1.13 16 3 O -0.36 -6.31 9.51 -40.70 -0.39 -6.70 16 4 C 0.52 10.87 7.88 34.40 0.27 11.14 16 5 O -0.53 -12.69 13.59 -19.29 -0.26 -12.96 16 6 C -0.32 -6.95 5.91 -104.63 -0.62 -7.56 16 7 C 0.23 4.50 10.79 -17.14 -0.18 4.32 16 8 N -0.58 -11.81 10.31 -10.09 -0.10 -11.91 16 9 C 0.21 4.32 7.26 -17.44 -0.13 4.20 16 10 Cl -0.07 -1.16 29.09 -51.86 -1.51 -2.67 16 11 C -0.23 -4.84 9.10 -39.20 -0.36 -5.19 16 12 C 0.22 5.12 6.66 -83.38 -0.56 4.56 16 13 N -0.47 -11.82 5.30 -9.21 -0.05 -11.87 16 14 C -0.31 -7.72 9.56 -15.08 -0.14 -7.86 16 15 H 0.11 2.60 5.79 -52.49 -0.30 2.30 16 16 C 0.03 0.79 5.50 -17.45 -0.10 0.69 16 17 N -0.84 -21.60 13.05 55.49 0.72 -20.88 16 18 Si 0.94 18.19 29.55 -169.99 -5.02 13.16 16 19 H -0.26 -4.83 7.11 56.52 0.40 -4.42 16 20 H -0.27 -5.23 7.11 56.52 0.40 -4.83 16 21 H -0.27 -5.21 7.11 56.52 0.40 -4.81 16 22 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 23 H 0.07 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.06 0.65 8.14 -51.93 -0.42 0.22 16 25 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 26 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 27 H 0.16 2.49 7.63 -52.49 -0.40 2.09 16 28 H 0.14 2.79 6.12 -52.49 -0.32 2.47 16 29 H 0.43 11.37 4.60 -40.82 -0.19 11.18 16 30 H 0.29 6.73 8.31 -40.82 -0.34 6.39 16 LS Contribution 284.02 15.07 4.28 4.28 Total: -1.00 -27.25 284.02 -5.99 -33.24 By element: Atomic # 1 Polarization: 14.50 SS G_CDS: -2.46 Total: 12.04 kcal Atomic # 6 Polarization: 5.47 SS G_CDS: -1.20 Total: 4.27 kcal Atomic # 7 Polarization: -45.23 SS G_CDS: 0.57 Total: -44.66 kcal Atomic # 8 Polarization: -19.01 SS G_CDS: -0.65 Total: -19.66 kcal Atomic # 14 Polarization: 18.19 SS G_CDS: -5.02 Total: 13.16 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -1.51 Total: -2.67 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -27.25 -5.99 -33.24 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155531509.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.000 kcal (2) G-P(sol) polarization free energy of solvation -27.249 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.989 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds