Wall clock time and date at job start Mon Mar 30 2020 00:59:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34764 * 117.00200 * 2 1 4 4 O 1.21519 * 119.99550 * 0.02562 * 3 2 1 5 5 C 1.47404 * 120.00359 * 180.02562 * 3 2 1 6 6 C 1.40413 * 120.47078 * 6.23215 * 5 3 2 7 7 C 1.36953 * 118.47480 * 179.74944 * 6 5 3 8 8 Cl 1.73601 * 120.32220 * 180.28793 * 7 6 5 9 9 C 1.39584 * 119.35457 * 0.51277 * 7 6 5 10 10 N 1.38365 * 119.54805 * 179.74860 * 9 7 6 11 11 C 1.36814 * 120.00301 * 179.73166 * 10 9 7 12 12 H 1.08004 * 119.99778 * 359.97438 * 11 10 9 13 13 C 1.38895 * 120.00196 * 179.97438 * 11 10 9 14 14 N 1.31496 * 119.99971 * 359.72684 * 13 11 10 15 15 Si 1.86800 * 120.00271 * 180.02562 * 13 11 10 16 16 H 1.48505 * 109.46859 * 359.97438 * 15 13 11 17 17 H 1.48491 * 109.47497 * 120.00072 * 15 13 11 18 18 H 1.48504 * 109.47297 * 240.00145 * 15 13 11 19 19 N 1.32687 * 120.90707 * 359.47483 * 9 7 6 20 20 C 1.31591 * 121.65661 * 0.27564 * 19 9 7 21 21 C 1.50708 * 119.72664 * 179.97438 * 20 19 9 22 22 H 1.08994 * 109.46831 * 299.99582 * 1 2 3 23 23 H 1.08997 * 109.47041 * 59.99479 * 1 2 3 24 24 H 1.08998 * 109.46759 * 179.97438 * 1 2 3 25 25 H 1.07999 * 120.76413 * 0.02562 * 6 5 3 26 26 H 0.97000 * 119.99683 * 359.73342 * 10 9 7 27 27 H 0.97003 * 120.00135 * 180.02562 * 14 13 11 28 28 H 1.08999 * 109.46675 * 96.58590 * 21 20 19 29 29 H 1.08992 * 109.47288 * 216.59200 * 21 20 19 30 30 H 1.08997 * 109.46925 * 336.58875 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0639 1.2007 0.0000 4 8 1.4020 2.2198 0.0005 5 6 3.5359 1.2779 -0.0006 6 6 4.3099 0.1138 -0.1325 7 6 5.6742 0.2334 -0.1331 8 17 6.6772 -1.1735 -0.3007 9 6 6.2504 1.4970 0.0072 10 7 7.6284 1.6219 0.0124 11 6 8.2029 2.8565 0.1438 12 1 7.5809 3.7338 0.2431 13 6 9.5862 2.9818 0.1496 14 7 10.3436 1.9131 0.0341 15 14 10.3708 4.6674 0.3297 16 1 9.3080 5.6979 0.4481 17 1 11.2209 4.6903 1.5470 18 1 11.2070 4.9543 -0.8634 19 7 5.4947 2.5808 0.1303 20 6 4.1807 2.5101 0.1306 21 6 3.3647 3.7691 0.2738 22 1 -0.3633 0.5137 0.8900 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 3.8401 -0.8531 -0.2357 26 1 8.1870 0.8340 -0.0771 27 1 11.3097 2.0004 0.0385 28 1 3.0627 4.1203 -0.7129 29 1 2.4781 3.5613 0.8727 30 1 3.9633 4.5361 0.7650 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155537418.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:13 Heat of formation + Delta-G solvation = -60.418060 kcal Electronic energy + Delta-G solvation = -18018.871494 eV Core-core repulsion = 14840.020382 eV Total energy + Delta-G solvation = -3178.851112 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.08853 -38.94877 -36.25817 -35.75709 -35.52533 -32.61849 -31.94509 -30.06815 -27.86292 -26.64780 -25.28247 -22.52014 -21.67039 -20.59127 -18.33350 -17.24555 -16.86661 -16.49410 -15.89818 -15.41957 -14.75332 -14.22057 -14.07734 -13.93817 -13.13780 -12.95609 -12.82668 -12.33417 -12.17491 -11.94699 -11.76464 -11.66737 -11.47505 -11.14966 -10.92505 -10.59516 -10.43338 -10.39778 -10.33695 -9.63705 -9.22688 -8.71980 -8.56688 -7.32030 -7.07641 -4.14733 1.49790 2.10274 2.88920 2.91973 2.98605 3.05857 3.26314 3.29960 3.72863 4.37934 4.46430 4.89387 5.28886 5.36133 5.36861 5.40643 5.53249 5.73498 5.92085 6.19816 6.28809 6.33438 6.58925 6.64413 6.75666 6.94385 6.97170 7.18846 7.52202 8.21908 8.42635 8.59913 8.75576 9.29455 10.04636 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.024715 B = 0.005587 C = 0.004574 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1132.642050 B = 5010.264177 C = 6120.416479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 O -0.366 6.366 3 C 0.523 3.477 4 O -0.537 6.537 5 C -0.332 4.332 6 C 0.035 3.965 7 C -0.194 4.194 8 Cl -0.091 7.091 9 C 0.343 3.657 10 N -0.472 5.472 11 C -0.278 4.278 12 H 0.128 0.872 13 C 0.024 3.976 14 N -0.858 5.858 15 Si 0.947 3.053 16 H -0.258 1.258 17 H -0.274 1.274 18 H -0.274 1.274 19 N -0.538 5.538 20 C 0.266 3.734 21 C -0.104 4.104 22 H 0.057 0.943 23 H 0.057 0.943 24 H 0.092 0.908 25 H 0.132 0.868 26 H 0.415 0.585 27 H 0.287 0.713 28 H 0.075 0.925 29 H 0.093 0.907 30 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.688 -2.564 0.057 9.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.283 6.283 3 C 0.374 3.626 4 O -0.429 6.429 5 C -0.343 4.343 6 C 0.011 3.989 7 C -0.229 4.229 8 Cl -0.063 7.063 9 C 0.095 3.905 10 N -0.070 5.070 11 C -0.410 4.410 12 H 0.145 0.855 13 C -0.185 4.185 14 N -0.491 5.491 15 Si 0.771 3.229 16 H -0.182 1.182 17 H -0.199 1.199 18 H -0.199 1.199 19 N -0.259 5.259 20 C 0.112 3.888 21 C -0.161 4.161 22 H 0.076 0.924 23 H 0.076 0.924 24 H 0.111 0.889 25 H 0.150 0.850 26 H 0.254 0.746 27 H 0.097 0.903 28 H 0.093 0.907 29 H 0.111 0.889 30 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -7.713 -1.576 0.132 7.874 hybrid contribution 0.301 -0.778 -0.129 0.844 sum -7.412 -2.354 0.003 7.777 Atomic orbital electron populations 1.23079 0.77640 1.02693 1.02011 1.86567 1.22230 1.34090 1.85429 1.20907 0.88800 0.80565 0.72374 1.90701 1.67071 1.35388 1.49787 1.18683 0.88469 0.94638 1.32534 1.20709 0.90616 0.97971 0.89644 1.20404 0.91694 0.86605 1.24206 1.98283 1.69838 1.41131 1.97098 1.17768 0.85640 0.87446 0.99666 1.41379 1.01756 1.10937 1.52905 1.20451 0.90642 0.86416 1.43474 0.85450 1.25760 0.96287 1.00836 0.95568 1.69668 1.07128 1.29813 1.42442 0.85511 0.79222 0.79732 0.78441 1.18180 1.19924 1.19926 1.67262 1.04683 1.28397 1.25545 1.20880 0.88787 0.93154 0.85932 1.20945 0.98819 0.93239 1.03088 0.92433 0.92446 0.88942 0.84990 0.74649 0.90304 0.90651 0.88889 0.91742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.47 10.57 101.05 1.07 1.53 16 2 O -0.37 -5.82 9.90 -40.67 -0.40 -6.22 16 3 C 0.52 9.55 7.82 34.46 0.27 9.82 16 4 O -0.54 -10.19 13.15 -19.28 -0.25 -10.45 16 5 C -0.33 -6.53 5.89 -104.80 -0.62 -7.15 16 6 C 0.04 0.68 9.46 -39.23 -0.37 0.30 16 7 C -0.19 -4.01 6.32 -39.55 -0.25 -4.26 16 8 Cl -0.09 -1.71 27.58 -51.86 -1.43 -3.14 16 9 C 0.34 7.89 7.42 -155.22 -1.15 6.73 16 10 N -0.47 -11.36 5.35 -11.14 -0.06 -11.42 16 11 C -0.28 -6.84 9.69 -15.09 -0.15 -6.98 16 12 H 0.13 3.15 7.06 -52.48 -0.37 2.78 16 13 C 0.02 0.57 5.50 -17.45 -0.10 0.47 16 14 N -0.86 -20.90 13.05 55.49 0.72 -20.18 16 15 Si 0.95 18.31 29.55 -169.99 -5.02 13.29 16 16 H -0.26 -4.95 7.11 56.52 0.40 -4.55 16 17 H -0.27 -5.24 7.11 56.52 0.40 -4.84 16 18 H -0.27 -5.24 7.11 56.52 0.40 -4.84 16 19 N -0.54 -12.26 8.97 -8.33 -0.07 -12.34 16 20 C 0.27 5.48 6.82 -82.15 -0.56 4.92 16 21 C -0.10 -1.83 8.87 36.01 0.32 -1.51 16 22 H 0.06 0.65 8.14 -51.93 -0.42 0.22 16 23 H 0.06 0.65 8.14 -51.93 -0.42 0.22 16 24 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 25 H 0.13 2.21 7.71 -52.49 -0.40 1.81 16 26 H 0.41 9.93 6.51 -40.82 -0.27 9.66 16 27 H 0.29 6.45 8.31 -40.82 -0.34 6.11 16 28 H 0.07 1.27 8.14 -51.93 -0.42 0.85 16 29 H 0.09 1.63 5.85 -51.93 -0.30 1.32 16 30 H 0.06 1.08 8.14 -51.93 -0.42 0.66 16 LS Contribution 283.37 15.07 4.27 4.27 Total: -1.00 -26.16 283.37 -6.38 -32.54 By element: Atomic # 1 Polarization: 12.36 SS G_CDS: -2.59 Total: 9.77 kcal Atomic # 6 Polarization: 5.41 SS G_CDS: -1.54 Total: 3.88 kcal Atomic # 7 Polarization: -44.53 SS G_CDS: 0.59 Total: -43.94 kcal Atomic # 8 Polarization: -16.01 SS G_CDS: -0.66 Total: -16.67 kcal Atomic # 14 Polarization: 18.31 SS G_CDS: -5.02 Total: 13.29 kcal Atomic # 17 Polarization: -1.71 SS G_CDS: -1.43 Total: -3.14 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -26.16 -6.38 -32.54 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155537418.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.882 kcal (2) G-P(sol) polarization free energy of solvation -26.157 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.536 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds