Wall clock time and date at job start Mon Mar 30 2020 01:08:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34219 * 116.99784 * 2 1 4 4 O 1.20829 * 120.00301 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99881 * 180.02562 * 3 2 1 6 6 N 1.46500 * 109.47347 * 180.02562 * 5 3 2 7 7 C 1.38410 * 120.00211 * 179.97438 * 6 5 3 8 8 N 1.32744 * 119.43638 * 0.02562 * 7 6 5 9 9 C 1.31475 * 121.74005 * 179.97438 * 8 7 6 10 10 C 1.40789 * 120.38630 * 0.02562 * 9 8 7 11 11 C 1.41197 * 120.56055 * 180.02562 * 10 9 8 12 12 H 1.07997 * 120.00401 * 335.70652 * 11 10 9 13 13 C 1.39872 * 119.99897 * 155.70829 * 11 10 9 14 14 N 1.30911 * 119.99775 * 343.24928 * 13 11 10 15 15 Si 1.86799 * 120.00203 * 163.25102 * 13 11 10 16 16 H 1.48503 * 109.46859 * 59.99957 * 15 13 11 17 17 H 1.48496 * 109.47290 * 179.97438 * 15 13 11 18 18 H 1.48503 * 109.46896 * 300.00282 * 15 13 11 19 19 C 1.41281 * 118.87485 * 359.97438 * 10 9 8 20 20 C 1.36669 * 118.39651 * 359.97438 * 19 10 9 21 21 Cl 1.73608 * 120.26053 * 179.97438 * 20 19 10 22 22 H 1.08993 * 109.46772 * 299.99704 * 1 2 3 23 23 H 1.08999 * 109.47236 * 59.99802 * 1 2 3 24 24 H 1.08999 * 109.46727 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47421 * 60.00468 * 5 3 2 26 26 H 1.09000 * 109.47131 * 299.99839 * 5 3 2 27 27 H 0.97006 * 119.99720 * 0.02562 * 6 5 3 28 28 H 1.07993 * 119.80216 * 180.27948 * 9 8 7 29 29 H 0.97002 * 119.99496 * 180.02562 * 14 13 11 30 30 H 1.07996 * 120.80112 * 179.97438 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 7 3.9817 2.6797 0.0002 7 6 5.3274 3.0035 0.0003 8 7 6.2321 2.0321 -0.0007 9 6 7.5217 2.2881 -0.0011 10 6 7.9838 3.6180 0.0001 11 6 9.3679 3.8971 -0.0008 12 1 10.0662 3.1677 0.3824 13 6 9.8348 5.1182 -0.4981 14 7 9.0599 5.8577 -1.2507 15 14 11.5639 5.6940 -0.0882 16 1 12.5480 4.7020 -0.5910 17 1 11.8136 7.0085 -0.7322 18 1 11.7048 5.8285 1.3840 19 6 7.0391 4.6685 0.0012 20 6 5.7106 4.3479 0.0005 21 17 4.5083 5.6003 0.0024 22 1 -0.3632 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 3.9557 0.7810 -0.8908 26 1 3.9564 0.7806 0.8892 27 1 3.3136 3.3830 0.0013 28 1 8.2306 1.4734 -0.0065 29 1 9.3838 6.7044 -1.5958 30 1 7.3591 5.7000 0.0026 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001156345350.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:08:40 Heat of formation + Delta-G solvation = -61.350915 kcal Electronic energy + Delta-G solvation = -17654.848128 eV Core-core repulsion = 14475.956565 eV Total energy + Delta-G solvation = -3178.891563 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.48519 -38.75949 -36.70056 -35.58247 -35.05082 -33.54245 -30.57077 -30.04178 -28.41212 -26.60553 -24.59446 -22.18652 -21.30494 -20.59246 -17.99477 -17.49679 -17.03862 -16.63024 -15.97066 -15.53434 -14.96149 -14.31704 -14.28178 -13.83285 -13.24438 -13.11877 -12.96776 -12.37542 -12.14829 -12.12524 -11.81427 -11.44974 -11.23455 -10.99485 -10.91688 -10.77338 -10.54128 -10.39754 -9.88853 -9.58279 -8.95416 -8.38014 -8.19255 -6.99872 -6.76641 -4.37005 2.17058 2.46164 2.56370 2.76287 3.03374 3.05038 3.14455 3.18357 3.86114 4.12344 4.51508 4.78164 4.96362 5.03354 5.36457 5.45552 5.67308 5.69941 5.83397 6.25503 6.27638 6.57783 6.86677 7.00428 7.09485 7.55800 7.63761 7.68471 7.98895 8.28752 8.32252 8.61620 8.67239 9.43293 10.08241 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.037819 B = 0.004370 C = 0.003968 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 740.191720 B = 6405.403291 C = 7055.562111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.358 6.358 3 C 0.456 3.544 4 O -0.507 6.507 5 C 0.157 3.843 6 N -0.736 5.736 7 C 0.286 3.714 8 N -0.503 5.503 9 C 0.014 3.986 10 C 0.041 3.959 11 C -0.451 4.451 12 H 0.084 0.916 13 C 0.073 3.927 14 N -0.796 5.796 15 Si 0.913 3.087 16 H -0.265 1.265 17 H -0.278 1.278 18 H -0.263 1.263 19 C -0.089 4.089 20 C -0.097 4.097 21 Cl -0.110 7.110 22 H 0.062 0.938 23 H 0.062 0.938 24 H 0.101 0.899 25 H 0.098 0.902 26 H 0.098 0.902 27 H 0.409 0.591 28 H 0.137 0.863 29 H 0.284 0.716 30 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.606 -5.934 1.695 10.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.274 6.274 3 C 0.300 3.700 4 O -0.394 6.394 5 C 0.031 3.969 6 N -0.382 5.382 7 C 0.053 3.947 8 N -0.218 5.218 9 C -0.145 4.145 10 C 0.036 3.964 11 C -0.482 4.482 12 H 0.102 0.898 13 C -0.145 4.145 14 N -0.422 5.422 15 Si 0.737 3.263 16 H -0.189 1.189 17 H -0.203 1.203 18 H -0.188 1.188 19 C -0.115 4.115 20 C -0.129 4.129 21 Cl -0.082 7.082 22 H 0.081 0.919 23 H 0.081 0.919 24 H 0.119 0.881 25 H 0.116 0.884 26 H 0.115 0.885 27 H 0.248 0.752 28 H 0.154 0.846 29 H 0.095 0.905 30 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -9.202 -6.352 1.546 11.288 hybrid contribution 0.465 1.665 0.022 1.729 sum -8.738 -4.687 1.567 10.038 Atomic orbital electron populations 1.23254 0.76418 1.03579 1.02561 1.86503 1.23357 1.33276 1.84231 1.24129 0.92651 0.81352 0.71916 1.90648 1.66999 1.36363 1.45395 1.20261 0.84332 0.87286 1.05014 1.43515 1.03735 1.04376 1.86557 1.17249 0.84450 0.87071 1.05917 1.66737 1.03114 1.33888 1.18085 1.22341 0.89275 0.95464 1.07401 1.18311 0.94309 0.90841 0.92980 1.19329 0.91899 1.01000 1.35926 0.89825 1.25926 1.00056 0.96029 0.92505 1.69786 1.37879 1.11714 1.22772 0.86284 0.81667 0.78407 0.79940 1.18914 1.20335 1.18775 1.21321 0.88513 1.01577 1.00132 1.20879 0.90468 0.86460 1.15077 1.98257 1.58007 1.54272 1.97677 0.91918 0.91915 0.88099 0.88443 0.88460 0.75203 0.84591 0.90500 0.84120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.32 10.56 101.05 1.07 1.39 16 2 O -0.36 -4.44 10.57 -39.23 -0.41 -4.86 16 3 C 0.46 6.75 8.03 36.01 0.29 7.04 16 4 O -0.51 -8.68 15.42 -18.75 -0.29 -8.97 16 5 C 0.16 2.48 6.25 -5.19 -0.03 2.44 16 6 N -0.74 -14.17 5.61 -61.50 -0.35 -14.51 16 7 C 0.29 6.38 7.48 -155.05 -1.16 5.22 16 8 N -0.50 -11.36 9.52 -11.75 -0.11 -11.47 16 9 C 0.01 0.33 10.97 -16.74 -0.18 0.14 16 10 C 0.04 1.03 5.59 -106.65 -0.60 0.43 16 11 C -0.45 -11.11 9.07 -37.85 -0.34 -11.46 16 12 H 0.08 1.94 7.90 -52.49 -0.41 1.52 16 13 C 0.07 1.72 5.18 -17.33 -0.09 1.63 16 14 N -0.80 -19.66 10.91 55.54 0.61 -19.05 16 15 Si 0.91 17.77 29.59 -169.99 -5.03 12.74 16 16 H -0.26 -5.08 7.11 56.52 0.40 -4.67 16 17 H -0.28 -5.34 7.11 56.52 0.40 -4.94 16 18 H -0.26 -5.10 7.11 56.52 0.40 -4.70 16 19 C -0.09 -2.20 8.52 -38.99 -0.33 -2.53 16 20 C -0.10 -2.24 6.32 -39.57 -0.25 -2.49 16 21 Cl -0.11 -2.24 27.56 -51.86 -1.43 -3.67 16 22 H 0.06 0.56 8.13 -51.93 -0.42 0.14 16 23 H 0.06 0.56 8.13 -51.93 -0.42 0.14 16 24 H 0.10 0.60 8.14 -51.93 -0.42 0.18 16 25 H 0.10 1.48 8.14 -51.93 -0.42 1.06 16 26 H 0.10 1.46 8.14 -51.93 -0.42 1.04 16 27 H 0.41 7.92 6.05 -40.82 -0.25 7.67 16 28 H 0.14 2.86 8.06 -52.49 -0.42 2.44 16 29 H 0.28 6.45 8.30 -40.82 -0.34 6.11 16 30 H 0.14 3.63 6.20 -52.49 -0.33 3.30 16 LS Contribution 285.65 15.07 4.30 4.30 Total: -1.00 -27.40 285.65 -7.00 -34.40 By element: Atomic # 1 Polarization: 11.93 SS G_CDS: -2.66 Total: 9.27 kcal Atomic # 6 Polarization: 3.46 SS G_CDS: -1.63 Total: 1.82 kcal Atomic # 7 Polarization: -45.18 SS G_CDS: 0.15 Total: -45.03 kcal Atomic # 8 Polarization: -13.13 SS G_CDS: -0.70 Total: -13.83 kcal Atomic # 14 Polarization: 17.77 SS G_CDS: -5.03 Total: 12.74 kcal Atomic # 17 Polarization: -2.24 SS G_CDS: -1.43 Total: -3.67 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -27.40 -7.00 -34.40 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001156345350.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.955 kcal (2) G-P(sol) polarization free energy of solvation -27.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.396 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds