Wall clock time and date at job start Mon Mar 30 2020 01:05:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 O 1.45205 * 109.47416 * 2 1 4 4 C 1.34779 * 117.00394 * 180.02562 * 3 2 1 5 5 O 1.21534 * 120.00084 * 359.97438 * 4 3 2 6 6 C 1.47224 * 119.99924 * 180.02562 * 4 3 2 7 7 C 1.40194 * 120.63526 * 89.97438 * 6 4 3 8 8 Cl 1.73602 * 120.83832 * 0.03753 * 7 6 4 9 9 C 1.38527 * 118.32899 * 180.02562 * 7 6 4 10 10 C 1.38376 * 119.50152 * 359.97438 * 9 7 6 11 11 N 1.31816 * 121.26461 * 359.73290 * 10 9 7 12 12 C 1.32488 * 121.82312 * 0.56123 * 11 10 9 13 13 N 1.38185 * 119.82567 * 179.71311 * 12 11 10 14 14 C 1.36878 * 120.00357 * 359.72932 * 13 12 11 15 15 H 1.08000 * 120.00353 * 0.02562 * 14 13 12 16 16 C 1.38885 * 120.00379 * 179.97438 * 14 13 12 17 17 N 1.31509 * 120.00271 * 179.72270 * 16 14 13 18 18 Si 1.86803 * 119.99585 * 0.02562 * 16 14 13 19 19 H 1.48501 * 109.47085 * 89.99641 * 18 16 14 20 20 H 1.48497 * 109.46789 * 209.99651 * 18 16 14 21 21 H 1.48490 * 109.47245 * 329.99800 * 18 16 14 22 22 H 1.08997 * 109.47470 * 300.00133 * 1 2 3 23 23 H 1.08999 * 109.47102 * 60.00202 * 1 2 3 24 24 H 1.09003 * 109.47391 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.47470 * 239.99867 * 2 1 3 26 26 H 1.09004 * 109.47110 * 119.99332 * 2 1 3 27 27 H 1.08004 * 120.25383 * 180.02562 * 9 7 6 28 28 H 1.08001 * 119.36390 * 180.02562 * 10 9 7 29 29 H 0.97005 * 119.99687 * 179.72961 * 13 12 11 30 30 H 0.97000 * 119.99678 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3502 1.5456 -0.0005 5 8 4.0905 0.5818 -0.0005 6 6 3.9129 2.9061 0.0000 7 6 4.1860 3.5657 1.2065 8 17 3.8701 2.7986 2.7315 9 6 4.7145 4.8450 1.1513 10 6 4.9561 5.4299 -0.0793 11 7 4.6978 4.7910 -1.2029 12 6 4.1869 3.5687 -1.2100 13 7 3.9268 2.9394 -2.4125 14 6 4.1918 3.5811 -3.5921 15 1 4.6046 4.5790 -3.5832 16 6 3.9309 2.9484 -4.8007 17 7 4.1804 3.5670 -5.9341 18 14 3.2175 1.2220 -4.8162 19 1 1.7345 1.2993 -4.8207 20 1 3.6797 0.5065 -6.0326 21 1 3.6712 0.4881 -3.6077 22 1 -0.3634 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 1.8933 -0.5138 -0.8899 26 1 1.8933 -0.5137 0.8901 27 1 4.9370 5.3816 2.0618 28 1 5.3686 6.4272 -0.1197 29 1 3.5563 2.0429 -2.4206 30 1 3.9978 3.1253 -6.7781 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001163187154.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:34 Heat of formation + Delta-G solvation = -52.476167 kcal Electronic energy + Delta-G solvation = -18438.309938 eV Core-core repulsion = 15259.803213 eV Total energy + Delta-G solvation = -3178.506725 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.32318 -39.00099 -36.53289 -36.19627 -35.55659 -32.53198 -31.96792 -31.19507 -29.46756 -25.10383 -24.70161 -22.83101 -21.58646 -20.87422 -18.87812 -17.64170 -17.24709 -16.47362 -16.39630 -15.59534 -14.76406 -14.65615 -13.92012 -13.70730 -13.48873 -13.30074 -13.12236 -12.78163 -12.44043 -12.21572 -12.20455 -11.77152 -11.51504 -11.49417 -10.90502 -10.81304 -10.58619 -10.37322 -10.35071 -10.25648 -9.14186 -8.94206 -8.70661 -7.54674 -6.76868 -4.04702 1.52998 1.94361 2.27823 2.45880 2.88029 2.88539 2.93826 3.04472 3.76712 4.17312 4.29190 4.92563 4.96533 4.97626 5.09777 5.30004 5.30693 5.64980 5.70443 5.79599 5.86091 5.95049 6.01220 6.27836 6.48450 6.67380 6.97597 7.12582 7.70004 8.05478 8.21887 8.51942 8.88556 9.13219 10.31943 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.015815 B = 0.008731 C = 0.006023 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1770.004780 B = 3206.039353 C = 4647.365751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.055 3.945 3 O -0.350 6.350 4 C 0.532 3.468 5 O -0.501 6.501 6 C -0.289 4.289 7 C 0.110 3.890 8 Cl -0.076 7.076 9 C -0.301 4.301 10 C 0.198 3.802 11 N -0.522 5.522 12 C 0.391 3.609 13 N -0.527 5.527 14 C -0.289 4.289 15 H 0.140 0.860 16 C 0.047 3.953 17 N -0.846 5.846 18 Si 0.868 3.132 19 H -0.261 1.261 20 H -0.264 1.264 21 H -0.265 1.265 22 H 0.067 0.933 23 H 0.067 0.933 24 H 0.077 0.923 25 H 0.067 0.933 26 H 0.069 0.931 27 H 0.131 0.869 28 H 0.156 0.844 29 H 0.385 0.615 30 H 0.283 0.717 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.754 -2.980 11.039 12.383 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.019 4.019 3 O -0.267 6.267 4 C 0.375 3.625 5 O -0.388 6.388 6 C -0.302 4.302 7 C 0.076 3.924 8 Cl -0.047 7.047 9 C -0.327 4.327 10 C 0.028 3.972 11 N -0.240 5.240 12 C 0.146 3.854 13 N -0.130 5.130 14 C -0.419 4.419 15 H 0.158 0.842 16 C -0.161 4.161 17 N -0.479 5.479 18 Si 0.692 3.308 19 H -0.185 1.185 20 H -0.189 1.189 21 H -0.190 1.190 22 H 0.086 0.914 23 H 0.086 0.914 24 H 0.096 0.904 25 H 0.085 0.915 26 H 0.087 0.913 27 H 0.149 0.851 28 H 0.173 0.827 29 H 0.221 0.779 30 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -4.457 -3.066 9.661 11.072 hybrid contribution -0.653 -1.927 0.773 2.177 sum -5.110 -4.993 10.434 12.646 Atomic orbital electron populations 1.21794 0.92707 1.02675 1.03677 1.23030 0.95445 0.81025 1.02413 1.86758 1.24569 1.31491 1.83901 1.21023 0.80269 0.89788 0.71442 1.90811 1.60501 1.42694 1.44781 1.18450 1.22476 0.96012 0.93243 1.20622 0.95336 0.92448 0.83973 1.98343 1.94036 1.81608 1.30683 1.21115 1.16268 0.95454 0.99883 1.22422 0.90686 0.97867 0.86244 1.67274 1.18794 1.07851 1.30073 1.17421 0.95538 0.89178 0.83301 1.41225 1.53166 1.14767 1.03823 1.19840 1.38703 1.02948 0.80379 0.84217 1.25139 0.97114 0.98832 0.95008 1.69636 1.42919 1.37675 0.97702 0.86771 0.80748 0.83703 0.79567 1.18543 1.18881 1.19042 0.91408 0.91374 0.90442 0.91504 0.91260 0.85069 0.82678 0.77900 0.90627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.68 10.29 37.15 0.38 -1.29 16 2 C 0.05 0.81 6.20 37.15 0.23 1.04 16 3 O -0.35 -6.53 10.23 -40.71 -0.42 -6.94 16 4 C 0.53 11.13 5.32 34.38 0.18 11.31 16 5 O -0.50 -11.23 16.90 -19.29 -0.33 -11.56 16 6 C -0.29 -6.14 5.79 -104.60 -0.61 -6.75 16 7 C 0.11 2.05 6.40 -38.74 -0.25 1.80 16 8 Cl -0.08 -1.23 28.20 -51.86 -1.46 -2.69 16 9 C -0.30 -4.95 9.91 -39.42 -0.39 -5.34 16 10 C 0.20 3.44 11.16 -17.51 -0.20 3.25 16 11 N -0.52 -11.43 9.07 -12.18 -0.11 -11.54 16 12 C 0.39 9.00 7.45 -155.16 -1.16 7.85 16 13 N -0.53 -12.84 5.14 -10.95 -0.06 -12.90 16 14 C -0.29 -7.61 10.18 -15.06 -0.15 -7.77 16 15 H 0.14 3.96 7.30 -52.49 -0.38 3.57 16 16 C 0.05 1.22 5.50 -17.45 -0.10 1.12 16 17 N -0.85 -22.69 13.96 55.49 0.77 -21.92 16 18 Si 0.87 18.94 27.74 -169.99 -4.71 14.22 16 19 H -0.26 -5.50 7.11 56.52 0.40 -5.09 16 20 H -0.26 -5.62 7.11 56.52 0.40 -5.22 16 21 H -0.27 -5.77 6.52 56.52 0.37 -5.40 16 22 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 23 H 0.07 0.78 8.14 -51.93 -0.42 0.35 16 24 H 0.08 0.66 8.14 -51.93 -0.42 0.23 16 25 H 0.07 0.99 8.14 -51.93 -0.42 0.57 16 26 H 0.07 0.95 8.14 -51.93 -0.42 0.52 16 27 H 0.13 1.75 8.06 -52.48 -0.42 1.33 16 28 H 0.16 2.05 8.06 -52.49 -0.42 1.63 16 29 H 0.39 9.08 4.58 -40.82 -0.19 8.90 16 30 H 0.28 6.97 8.31 -40.82 -0.34 6.63 16 LS Contribution 287.17 15.07 4.33 4.33 Total: -1.00 -28.74 287.17 -6.73 -35.47 By element: Atomic # 1 Polarization: 11.01 SS G_CDS: -2.70 Total: 8.31 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: -2.05 Total: 5.22 kcal Atomic # 7 Polarization: -46.96 SS G_CDS: 0.61 Total: -46.35 kcal Atomic # 8 Polarization: -17.76 SS G_CDS: -0.74 Total: -18.50 kcal Atomic # 14 Polarization: 18.94 SS G_CDS: -4.71 Total: 14.22 kcal Atomic # 17 Polarization: -1.23 SS G_CDS: -1.46 Total: -2.69 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -28.74 -6.73 -35.47 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001163187154.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.010 kcal (2) G-P(sol) polarization free energy of solvation -28.737 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.467 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds