Wall clock time and date at job start Mon Mar 30 2020 01:07:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34679 * 117.00342 * 2 1 4 4 O 1.21432 * 119.99730 * 0.02562 * 3 2 1 5 5 C 1.48061 * 120.00578 * 180.27219 * 3 2 1 6 6 C 1.39209 * 119.67728 * 179.45075 * 5 3 2 7 7 C 1.38940 * 119.21695 * 179.79751 * 6 5 3 8 8 Cl 1.73598 * 120.72278 * 180.22680 * 7 6 5 9 9 C 1.38442 * 118.55491 * 0.47358 * 7 6 5 10 10 C 1.39486 * 119.27571 * 359.75463 * 9 7 6 11 11 N 1.38854 * 119.63268 * 179.97438 * 10 9 7 12 12 C 1.46498 * 120.00096 * 185.01960 * 11 10 9 13 13 C 1.36919 * 119.99693 * 5.01825 * 11 10 9 14 14 H 1.07995 * 120.00308 * 24.33983 * 13 11 10 15 15 C 1.38822 * 119.99814 * 204.33578 * 13 11 10 16 16 N 1.31560 * 119.99651 * 10.44155 * 15 13 11 17 17 Si 1.86800 * 119.99857 * 190.43793 * 15 13 11 18 18 H 1.48493 * 109.47405 * 0.02562 * 17 15 13 19 19 H 1.48497 * 109.46633 * 120.00474 * 17 15 13 20 20 H 1.48503 * 109.46881 * 240.00182 * 17 15 13 21 21 N 1.32175 * 120.73716 * 0.02562 * 10 9 7 22 22 H 1.09004 * 109.47382 * 60.00020 * 1 2 3 23 23 H 1.09007 * 109.47201 * 179.97438 * 1 2 3 24 24 H 1.08993 * 109.47118 * 299.99352 * 1 2 3 25 25 H 1.08001 * 120.38975 * 0.02562 * 6 5 3 26 26 H 1.07997 * 120.36152 * 179.72577 * 9 7 6 27 27 H 1.08994 * 109.47161 * 93.54028 * 12 11 10 28 28 H 1.08994 * 109.47340 * 213.54023 * 12 11 10 29 29 H 1.09008 * 109.46990 * 333.53978 * 12 11 10 30 30 H 0.97004 * 119.99785 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0635 1.2000 0.0000 4 8 1.4021 2.2184 0.0005 5 6 3.5420 1.2775 -0.0061 6 6 4.1669 2.5214 -0.0176 7 6 5.5550 2.5831 -0.0190 8 17 6.3747 4.1133 -0.0273 9 6 6.2700 1.3976 -0.0188 10 6 5.5805 0.1851 -0.0120 11 7 6.2903 -1.0083 -0.0123 12 6 5.5780 -2.2842 -0.1163 13 6 7.6560 -0.9925 0.0846 14 1 8.1553 -0.1512 0.5419 15 6 8.3989 -2.0582 -0.4051 16 7 7.8185 -2.9816 -1.1408 17 14 10.2225 -2.1808 -0.0194 18 1 10.6296 -1.0258 0.8204 19 1 10.4893 -3.4441 0.7141 20 1 10.9980 -2.1704 -1.2858 21 7 4.2590 0.1595 -0.0064 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 3.5797 3.4278 -0.0218 26 1 7.3499 1.4115 -0.0243 27 1 5.5286 -2.5886 -1.1617 28 1 6.1074 -3.0438 0.4587 29 1 4.5677 -2.1694 0.2769 30 1 8.3375 -3.7264 -1.4827 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166798964.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:25 Heat of formation + Delta-G solvation = -35.619229 kcal Electronic energy + Delta-G solvation = -18088.397175 eV Core-core repulsion = 14910.621422 eV Total energy + Delta-G solvation = -3177.775754 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.25600 -39.09850 -36.52593 -36.18016 -35.75604 -32.32134 -31.49855 -29.54620 -27.73454 -26.72426 -24.42019 -23.93722 -21.23112 -20.70920 -18.26358 -17.14825 -16.95649 -16.10162 -15.90195 -15.39439 -15.08585 -14.40859 -14.04972 -13.82869 -13.36902 -13.15093 -13.08703 -12.56615 -11.96518 -11.87862 -11.58073 -11.46325 -11.31092 -10.97674 -10.76757 -10.58404 -10.56871 -10.51865 -10.37913 -9.66193 -8.99444 -8.78795 -8.77000 -7.18149 -6.64950 -4.10284 1.21767 2.00617 2.42640 2.88621 3.03805 3.04553 3.06256 3.09335 3.77912 4.41517 4.42325 4.88715 4.92416 5.22536 5.29303 5.57130 5.77479 5.85681 5.87009 6.16553 6.42485 6.53592 6.57921 6.79365 6.83422 7.08573 7.11216 7.19466 7.64677 7.90588 8.21926 8.63624 8.91996 9.37540 10.30718 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.017031 B = 0.006459 C = 0.004743 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1643.645480 B = 4333.821027 C = 5901.901261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.333 6.333 3 C 0.532 3.468 4 O -0.509 6.509 5 C 0.162 3.838 6 C -0.238 4.238 7 C 0.050 3.950 8 Cl -0.078 7.078 9 C -0.211 4.211 10 C 0.360 3.640 11 N -0.401 5.401 12 C 0.120 3.880 13 C -0.313 4.313 14 H 0.104 0.896 15 C 0.036 3.964 16 N -0.856 5.856 17 Si 0.935 3.065 18 H -0.264 1.264 19 H -0.276 1.276 20 H -0.276 1.276 21 N -0.520 5.520 22 H 0.060 0.940 23 H 0.100 0.900 24 H 0.060 0.940 25 H 0.135 0.865 26 H 0.141 0.859 27 H 0.061 0.939 28 H 0.062 0.938 29 H 0.050 0.950 30 H 0.275 0.725 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.369 3.832 1.810 6.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.248 6.248 3 C 0.375 3.625 4 O -0.397 6.397 5 C 0.018 3.982 6 C -0.268 4.268 7 C 0.017 3.983 8 Cl -0.049 7.049 9 C -0.240 4.240 10 C 0.116 3.884 11 N -0.086 5.086 12 C -0.023 4.023 13 C -0.442 4.442 14 H 0.121 0.879 15 C -0.172 4.172 16 N -0.489 5.489 17 Si 0.760 3.240 18 H -0.188 1.188 19 H -0.202 1.202 20 H -0.202 1.202 21 N -0.244 5.244 22 H 0.079 0.921 23 H 0.118 0.882 24 H 0.079 0.921 25 H 0.153 0.847 26 H 0.159 0.841 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.069 0.931 30 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -5.674 2.845 1.695 6.569 hybrid contribution 1.188 0.767 0.035 1.415 sum -4.486 3.612 1.730 6.013 Atomic orbital electron populations 1.23265 0.77087 1.03520 1.02196 1.86743 1.22383 1.32214 1.83452 1.21065 0.88273 0.81237 0.71905 1.90787 1.66178 1.36282 1.46416 1.19118 0.89083 0.89162 1.00805 1.20841 0.92414 0.97623 1.15923 1.20528 0.91745 0.85929 1.00127 1.98325 1.79263 1.30467 1.96875 1.21256 1.01380 0.89684 1.11722 1.18078 0.86575 0.86766 0.96946 1.42630 1.05106 1.01651 1.59243 1.21512 0.94189 0.84348 1.02222 1.19804 0.79828 1.07383 1.37149 0.87893 1.25521 1.01181 0.95919 0.94563 1.70098 1.37424 1.11869 1.29487 0.85724 0.80719 0.78924 0.78657 1.18798 1.20161 1.20206 1.66996 1.06490 1.29638 1.21249 0.92087 0.88191 0.92105 0.84733 0.84095 0.92046 0.91973 0.93102 0.91448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.40 10.56 101.05 1.07 1.47 16 2 O -0.33 -5.72 10.38 -40.44 -0.42 -6.13 16 3 C 0.53 10.00 7.95 34.76 0.28 10.28 16 4 O -0.51 -9.75 16.10 -19.21 -0.31 -10.06 16 5 C 0.16 3.31 6.74 -83.05 -0.56 2.75 16 6 C -0.24 -4.59 9.45 -38.96 -0.37 -4.96 16 7 C 0.05 0.96 6.36 -39.25 -0.25 0.71 16 8 Cl -0.08 -1.27 29.01 -51.86 -1.50 -2.78 16 9 C -0.21 -4.44 9.08 -39.04 -0.35 -4.79 16 10 C 0.36 8.27 7.34 -155.22 -1.14 7.14 16 11 N -0.40 -9.67 3.12 -122.43 -0.38 -10.05 16 12 C 0.12 2.76 8.78 59.85 0.53 3.28 16 13 C -0.31 -7.55 8.89 -15.06 -0.13 -7.68 16 14 H 0.10 2.37 6.34 -52.49 -0.33 2.04 16 15 C 0.04 0.85 5.14 -17.45 -0.09 0.76 16 16 N -0.86 -21.04 10.66 55.49 0.59 -20.45 16 17 Si 0.93 18.31 29.57 -169.99 -5.03 13.28 16 18 H -0.26 -5.06 7.11 56.52 0.40 -4.66 16 19 H -0.28 -5.39 7.11 56.52 0.40 -4.99 16 20 H -0.28 -5.45 7.11 56.52 0.40 -5.05 16 21 N -0.52 -11.56 8.77 -9.02 -0.08 -11.64 16 22 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 23 H 0.10 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.06 0.68 8.14 -51.93 -0.42 0.25 16 25 H 0.13 2.41 7.63 -52.49 -0.40 2.01 16 26 H 0.14 2.90 6.28 -52.49 -0.33 2.57 16 27 H 0.06 1.48 7.41 -51.93 -0.39 1.09 16 28 H 0.06 1.43 7.25 -51.93 -0.38 1.06 16 29 H 0.05 1.10 7.19 -51.92 -0.37 0.73 16 30 H 0.28 6.34 8.31 -40.82 -0.34 6.00 16 LS Contribution 284.06 15.07 4.28 4.28 Total: -1.00 -26.31 284.06 -6.47 -32.78 By element: Atomic # 1 Polarization: 4.41 SS G_CDS: -2.60 Total: 1.81 kcal Atomic # 6 Polarization: 9.97 SS G_CDS: -1.03 Total: 8.94 kcal Atomic # 7 Polarization: -42.27 SS G_CDS: 0.13 Total: -42.13 kcal Atomic # 8 Polarization: -15.47 SS G_CDS: -0.73 Total: -16.20 kcal Atomic # 14 Polarization: 18.31 SS G_CDS: -5.03 Total: 13.28 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -1.50 Total: -2.78 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -26.31 -6.47 -32.78 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166798964.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.836 kcal (2) G-P(sol) polarization free energy of solvation -26.309 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.475 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.619 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds