Wall clock time and date at job start Mon Mar 30 2020 01:07:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34701 * 117.00262 * 2 1 4 4 O 1.21448 * 119.99628 * 0.02562 * 3 2 1 5 5 C 1.47963 * 120.00097 * 180.27185 * 3 2 1 6 6 N 1.32875 * 119.69456 * 359.72956 * 5 3 2 7 7 C 1.32092 * 121.53917 * 179.97438 * 6 5 3 8 8 N 1.38860 * 119.62129 * 180.02562 * 7 6 5 9 9 C 1.46500 * 119.99937 * 5.00191 * 8 7 6 10 10 C 1.36912 * 120.00124 * 185.00408 * 8 7 6 11 11 H 1.07996 * 119.99884 * 24.43783 * 10 8 7 12 12 C 1.38817 * 119.99844 * 204.44242 * 10 8 7 13 13 N 1.31559 * 120.00078 * 10.47770 * 12 10 8 14 14 Si 1.86805 * 119.99969 * 190.48560 * 12 10 8 15 15 H 1.48495 * 109.46956 * 84.92445 * 14 12 10 16 16 H 1.48494 * 109.46756 * 204.92723 * 14 12 10 17 17 H 1.48503 * 109.46823 * 324.92729 * 14 12 10 18 18 C 1.39627 * 120.75743 * 359.97438 * 7 6 5 19 19 C 1.38190 * 119.31433 * 359.97438 * 18 7 6 20 20 C 1.38998 * 118.57768 * 359.75218 * 19 18 7 21 21 Cl 1.73598 * 120.40458 * 180.24612 * 20 19 18 22 22 H 1.08992 * 109.47205 * 299.99938 * 1 2 3 23 23 H 1.09001 * 109.46728 * 59.99840 * 1 2 3 24 24 H 1.08995 * 109.46982 * 179.97438 * 1 2 3 25 25 H 1.08995 * 109.47442 * 94.59468 * 9 8 7 26 26 H 1.09003 * 109.47418 * 214.59668 * 9 8 7 27 27 H 1.08999 * 109.47240 * 334.59301 * 9 8 7 28 28 H 0.97006 * 120.00571 * 180.02562 * 13 12 10 29 29 H 1.08003 * 120.33936 * 179.97438 * 18 7 6 30 30 H 1.08007 * 120.71186 * 180.02562 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0635 1.2002 0.0000 4 8 1.4021 2.2187 0.0005 5 6 3.5411 1.2776 -0.0061 6 7 4.2589 0.1593 -0.0061 7 6 5.5795 0.1859 -0.0119 8 7 6.2900 -1.0071 -0.0122 9 6 5.5784 -2.2834 -0.1167 10 6 7.6556 -0.9907 0.0852 11 1 8.1541 -0.1499 0.5445 12 6 8.3993 -2.0547 -0.4064 13 7 7.8200 -2.9766 -1.1449 14 14 10.2226 -2.1777 -0.0191 15 1 10.4055 -2.8409 1.2969 16 1 10.8998 -2.9746 -1.0734 17 1 10.8118 -0.8154 0.0269 18 6 6.2692 1.3999 -0.0188 19 6 5.5558 2.5834 -0.0201 20 6 4.1671 2.5227 -0.0197 21 17 3.2239 3.9800 -0.0277 22 1 -0.3633 0.5138 0.8899 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 5.5459 -2.5970 -1.1601 26 1 6.0978 -3.0384 0.4735 27 1 4.5621 -2.1646 0.2588 28 1 8.3396 -3.7204 -1.4881 29 1 7.3491 1.4138 -0.0232 30 1 6.0662 3.5352 -0.0259 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166799270.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:27 Heat of formation + Delta-G solvation = -26.571983 kcal Electronic energy + Delta-G solvation = -18229.142068 eV Core-core repulsion = 15051.758633 eV Total energy + Delta-G solvation = -3177.383436 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.15319 -39.04007 -36.50111 -35.84854 -35.44070 -32.28230 -31.80262 -29.30937 -27.63115 -26.74990 -24.41548 -23.75617 -21.31384 -20.65712 -18.18207 -17.10124 -16.86481 -16.01633 -15.87251 -15.38022 -15.31906 -14.45683 -14.03021 -13.59354 -13.29787 -13.12732 -12.59092 -12.36918 -11.99115 -11.87548 -11.55894 -11.37662 -11.12533 -11.00321 -10.95281 -10.67923 -10.57033 -10.45254 -9.70759 -9.55536 -9.08464 -8.85398 -8.63398 -7.10262 -6.64788 -4.10779 1.25235 2.08254 2.94559 2.95603 3.00264 3.04437 3.06084 3.09539 3.77112 4.42481 4.43925 4.88768 4.96836 5.29390 5.35900 5.42921 5.65116 5.84389 5.94147 6.17034 6.51410 6.57466 6.65627 6.78056 6.82740 7.08403 7.15126 7.19562 7.63397 7.98460 8.23514 8.62847 8.90895 9.36809 10.29162 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.026152 B = 0.005584 C = 0.004660 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1070.422844 B = 5012.815118 C = 6006.818117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.337 6.337 3 C 0.520 3.480 4 O -0.489 6.489 5 C 0.163 3.837 6 N -0.513 5.513 7 C 0.350 3.650 8 N -0.400 5.400 9 C 0.118 3.882 10 C -0.314 4.314 11 H 0.104 0.896 12 C 0.036 3.964 13 N -0.855 5.855 14 Si 0.936 3.064 15 H -0.272 1.272 16 H -0.279 1.279 17 H -0.266 1.266 18 C -0.208 4.208 19 C -0.033 4.033 20 C -0.162 4.162 21 Cl -0.071 7.071 22 H 0.059 0.941 23 H 0.059 0.941 24 H 0.098 0.902 25 H 0.063 0.937 26 H 0.060 0.940 27 H 0.051 0.949 28 H 0.276 0.724 29 H 0.139 0.861 30 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.212 4.008 1.788 6.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.252 6.252 3 C 0.363 3.637 4 O -0.375 6.375 5 C 0.019 3.981 6 N -0.237 5.237 7 C 0.106 3.894 8 N -0.085 5.085 9 C -0.025 4.025 10 C -0.442 4.442 11 H 0.121 0.879 12 C -0.172 4.172 13 N -0.488 5.488 14 Si 0.761 3.239 15 H -0.198 1.198 16 H -0.205 1.205 17 H -0.190 1.190 18 C -0.236 4.236 19 C -0.058 4.058 20 C -0.200 4.200 21 Cl -0.042 7.042 22 H 0.078 0.922 23 H 0.078 0.922 24 H 0.116 0.884 25 H 0.081 0.919 26 H 0.079 0.921 27 H 0.070 0.930 28 H 0.086 0.914 29 H 0.156 0.844 30 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -5.670 3.012 1.664 6.632 hybrid contribution 1.065 0.691 0.052 1.271 sum -4.605 3.704 1.717 6.154 Atomic orbital electron populations 1.23220 0.77274 1.03312 1.02117 1.86736 1.22226 1.32474 1.83765 1.21080 0.88321 0.81407 0.72902 1.90879 1.66051 1.35564 1.45019 1.19073 0.89555 0.88229 1.01236 1.67128 1.06676 1.28131 1.21750 1.18356 0.86842 0.87315 0.96906 1.42654 1.05107 1.01808 1.58910 1.21533 0.94227 0.84422 1.02340 1.19754 0.79850 1.07505 1.37101 0.87892 1.25534 1.01215 0.95933 0.94541 1.70085 1.37591 1.11925 1.29203 0.85778 0.80549 0.79080 0.78450 1.19797 1.20468 1.18999 1.21408 1.01118 0.90541 1.10555 1.20883 0.90782 0.98449 0.95680 1.20825 0.92071 0.86415 1.20684 1.98298 1.72773 1.35723 1.97455 0.92198 0.92181 0.88377 0.91886 0.92141 0.93035 0.91355 0.84377 0.84994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.44 10.56 101.05 1.07 1.51 16 2 O -0.34 -6.01 10.38 -40.49 -0.42 -6.43 16 3 C 0.52 10.18 7.94 34.72 0.28 10.45 16 4 O -0.49 -9.63 13.71 -19.23 -0.26 -9.89 16 5 C 0.16 3.42 6.75 -83.01 -0.56 2.86 16 6 N -0.51 -11.55 8.76 -8.98 -0.08 -11.62 16 7 C 0.35 7.98 7.34 -155.24 -1.14 6.84 16 8 N -0.40 -9.59 3.12 -122.41 -0.38 -9.97 16 9 C 0.12 2.71 8.79 59.85 0.53 3.23 16 10 C -0.31 -7.46 8.89 -15.07 -0.13 -7.59 16 11 H 0.10 2.31 6.35 -52.49 -0.33 1.97 16 12 C 0.04 0.84 5.14 -17.45 -0.09 0.75 16 13 N -0.85 -20.92 10.66 55.49 0.59 -20.33 16 14 Si 0.94 18.05 29.57 -169.99 -5.03 13.03 16 15 H -0.27 -5.24 7.11 56.52 0.40 -4.83 16 16 H -0.28 -5.42 7.11 56.52 0.40 -5.01 16 17 H -0.27 -5.00 7.11 56.52 0.40 -4.59 16 18 C -0.21 -4.21 9.27 -39.08 -0.36 -4.57 16 19 C -0.03 -0.60 9.96 -39.32 -0.39 -0.99 16 20 C -0.16 -3.17 6.37 -38.88 -0.25 -3.41 16 21 Cl -0.07 -1.27 26.01 -51.86 -1.35 -2.62 16 22 H 0.06 0.71 8.14 -51.93 -0.42 0.28 16 23 H 0.06 0.72 8.14 -51.93 -0.42 0.29 16 24 H 0.10 0.95 8.14 -51.93 -0.42 0.52 16 25 H 0.06 1.52 7.35 -51.93 -0.38 1.14 16 26 H 0.06 1.40 7.33 -51.93 -0.38 1.01 16 27 H 0.05 1.13 7.16 -51.93 -0.37 0.75 16 28 H 0.28 6.36 8.31 -40.82 -0.34 6.02 16 29 H 0.14 2.65 6.29 -52.48 -0.33 2.32 16 30 H 0.13 1.98 8.06 -52.48 -0.42 1.56 16 LS Contribution 279.79 15.07 4.22 4.22 Total: -1.00 -26.72 279.79 -6.39 -33.11 By element: Atomic # 1 Polarization: 4.06 SS G_CDS: -2.62 Total: 1.44 kcal Atomic # 6 Polarization: 10.13 SS G_CDS: -1.06 Total: 9.07 kcal Atomic # 7 Polarization: -42.06 SS G_CDS: 0.13 Total: -41.92 kcal Atomic # 8 Polarization: -15.64 SS G_CDS: -0.68 Total: -16.32 kcal Atomic # 14 Polarization: 18.05 SS G_CDS: -5.03 Total: 13.03 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -1.35 Total: -2.62 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -26.72 -6.39 -33.11 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166799270.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.538 kcal (2) G-P(sol) polarization free energy of solvation -26.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.110 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds