Wall clock time and date at job start Mon Mar 30 2020 01:07:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34666 * 117.00214 * 2 1 4 4 O 1.21434 * 119.99876 * 0.02562 * 3 2 1 5 5 C 1.48056 * 120.00156 * 180.02562 * 3 2 1 6 6 C 1.40017 * 120.87791 * 359.97438 * 5 3 2 7 7 C 1.38226 * 119.16550 * 180.27063 * 6 5 3 8 8 Cl 1.73604 * 119.51249 * 179.72778 * 7 6 5 9 9 N 1.31933 * 120.97759 * 359.50186 * 7 6 5 10 10 C 1.32453 * 121.93434 * 0.49178 * 9 7 6 11 11 N 1.38831 * 119.63417 * 179.74785 * 10 9 7 12 12 C 1.46493 * 120.00350 * 5.02294 * 11 10 9 13 13 C 1.36887 * 119.99791 * 185.02202 * 11 10 9 14 14 H 1.07997 * 119.99769 * 24.44777 * 13 11 10 15 15 C 1.38833 * 119.99829 * 204.45139 * 13 11 10 16 16 N 1.31550 * 120.00341 * 10.48264 * 15 13 11 17 17 Si 1.86801 * 119.99666 * 190.48592 * 15 13 11 18 18 H 1.48496 * 109.47067 * 84.92971 * 17 15 13 19 19 H 1.48501 * 109.46930 * 204.92679 * 17 15 13 20 20 H 1.48493 * 109.47163 * 324.92705 * 17 15 13 21 21 C 1.39159 * 120.72384 * 359.77609 * 10 9 7 22 22 H 1.09001 * 109.46748 * 299.99955 * 1 2 3 23 23 H 1.08996 * 109.47479 * 59.99866 * 1 2 3 24 24 H 1.09000 * 109.47107 * 180.02562 * 1 2 3 25 25 H 1.08005 * 120.41875 * 359.97438 * 6 5 3 26 26 H 1.09007 * 109.47140 * 94.56816 * 12 11 10 27 27 H 1.08997 * 109.47411 * 214.56599 * 12 11 10 28 28 H 1.08998 * 109.47575 * 334.56917 * 12 11 10 29 29 H 0.96999 * 120.00246 * 179.97438 * 16 15 13 30 30 H 1.08003 * 120.52374 * 179.97438 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0634 1.1999 0.0000 4 8 1.4020 2.2183 0.0005 5 6 3.5419 1.2773 -0.0006 6 6 4.3224 0.1149 -0.0006 7 6 5.7000 0.2284 0.0046 8 17 6.6764 -1.2070 0.0118 9 7 6.2839 1.4115 -0.0004 10 6 5.5859 2.5372 -0.0008 11 7 6.2498 3.7565 -0.0007 12 6 7.7100 3.7955 -0.1114 13 6 5.5399 4.9223 0.1026 14 1 4.5644 4.9212 0.5661 15 6 6.0738 6.1060 -0.3884 16 7 7.1589 6.0798 -1.1318 17 14 5.2515 7.7361 0.0065 18 1 5.7345 8.2284 1.3216 19 1 5.5870 8.7278 -1.0468 20 1 3.7794 7.5482 0.0585 21 6 4.1946 2.5111 -0.0006 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 3.8540 -0.8583 0.0002 26 1 7.9919 3.9297 -1.1558 27 1 8.0971 4.6261 0.4789 28 1 8.1278 2.8599 0.2603 29 1 7.5317 6.9068 -1.4752 30 1 3.6287 3.4310 -0.0005 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166800436.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:15 Heat of formation + Delta-G solvation = -36.908124 kcal Electronic energy + Delta-G solvation = -18069.868261 eV Core-core repulsion = 14892.036617 eV Total energy + Delta-G solvation = -3177.831644 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.28666 -39.12566 -36.49905 -36.23775 -35.64256 -32.48869 -31.73653 -29.19004 -27.79236 -26.73832 -24.63391 -23.51912 -21.90900 -20.29123 -18.29325 -17.14136 -17.00383 -16.14896 -15.78915 -15.36632 -14.85598 -14.67411 -14.15766 -13.97468 -13.43790 -13.17339 -13.06814 -12.73862 -12.09052 -11.75827 -11.38631 -11.29005 -11.07202 -10.96651 -10.79469 -10.67365 -10.63605 -10.53207 -10.35768 -9.63920 -9.24805 -8.76612 -8.72142 -7.12857 -6.64073 -4.10045 1.24703 1.95714 2.39283 2.88601 2.97436 3.06531 3.09364 3.11529 3.81555 4.40654 4.51871 4.88080 4.99684 5.14449 5.21836 5.51611 5.80253 5.84669 5.88074 6.11982 6.35057 6.53120 6.64018 6.80274 6.81410 7.10208 7.13115 7.18654 7.65394 7.99481 8.15894 8.61586 8.90792 9.36029 10.30680 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.015145 B = 0.006881 C = 0.004794 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1848.362547 B = 4068.376744 C = 5839.034147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.352 6.352 3 C 0.516 3.484 4 O -0.503 6.503 5 C -0.032 4.032 6 C -0.252 4.252 7 C 0.244 3.756 8 Cl -0.063 7.063 9 N -0.555 5.555 10 C 0.364 3.636 11 N -0.396 5.396 12 C 0.119 3.881 13 C -0.316 4.316 14 H 0.105 0.895 15 C 0.038 3.962 16 N -0.855 5.855 17 Si 0.935 3.065 18 H -0.272 1.272 19 H -0.279 1.279 20 H -0.264 1.264 21 C -0.169 4.169 22 H 0.061 0.939 23 H 0.062 0.938 24 H 0.099 0.901 25 H 0.134 0.866 26 H 0.064 0.936 27 H 0.061 0.939 28 H 0.050 0.950 29 H 0.276 0.724 30 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.886 -8.225 1.796 10.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.268 6.268 3 C 0.361 3.639 4 O -0.391 6.391 5 C -0.040 4.040 6 C -0.281 4.281 7 C 0.074 3.926 8 Cl -0.035 7.035 9 N -0.280 5.280 10 C 0.122 3.878 11 N -0.082 5.082 12 C -0.024 4.024 13 C -0.445 4.445 14 H 0.122 0.878 15 C -0.170 4.170 16 N -0.488 5.488 17 Si 0.760 3.240 18 H -0.197 1.197 19 H -0.204 1.204 20 H -0.188 1.188 21 C -0.197 4.197 22 H 0.080 0.920 23 H 0.080 0.920 24 H 0.118 0.882 25 H 0.151 0.849 26 H 0.082 0.918 27 H 0.080 0.920 28 H 0.068 0.932 29 H 0.087 0.913 30 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -4.800 -7.435 1.668 9.005 hybrid contribution -1.202 0.694 0.058 1.389 sum -6.002 -6.741 1.726 9.189 Atomic orbital electron populations 1.23236 0.76648 1.03412 1.02489 1.86574 1.22959 1.32875 1.84423 1.21311 0.89105 0.81126 0.72364 1.90810 1.66712 1.36079 1.45530 1.18717 0.87927 0.94135 1.03223 1.20917 0.91413 0.98349 1.17425 1.20719 0.87372 0.87104 0.97424 1.98338 1.73185 1.35189 1.96744 1.66037 1.40807 0.96503 1.24667 1.17857 0.87359 0.85322 0.97252 1.42658 1.05949 1.00956 1.58593 1.21533 0.79041 0.99429 1.02401 1.19799 1.03990 0.83500 1.37164 0.87789 1.25524 0.96587 1.00508 0.94429 1.70075 1.20400 1.29289 1.29055 0.85785 0.79867 0.79876 0.78452 1.19735 1.20415 1.18838 1.21383 0.93695 0.97373 1.07234 0.91997 0.91969 0.88216 0.84850 0.91798 0.92009 0.93151 0.91339 0.83707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.39 10.56 101.05 1.07 1.46 16 2 O -0.35 -5.32 9.92 -40.40 -0.40 -5.72 16 3 C 0.52 9.41 7.92 34.76 0.28 9.68 16 4 O -0.50 -10.12 16.23 -19.22 -0.31 -10.43 16 5 C -0.03 -0.63 5.90 -104.70 -0.62 -1.24 16 6 C -0.25 -4.66 9.46 -38.92 -0.37 -5.03 16 7 C 0.24 4.79 7.27 -17.51 -0.13 4.67 16 8 Cl -0.06 -1.04 29.10 -51.86 -1.51 -2.55 16 9 N -0.56 -12.37 8.95 -9.59 -0.09 -12.45 16 10 C 0.36 8.52 7.34 -155.13 -1.14 7.38 16 11 N -0.40 -9.72 3.11 -122.47 -0.38 -10.10 16 12 C 0.12 2.76 8.79 59.84 0.53 3.28 16 13 C -0.32 -7.82 8.89 -15.07 -0.13 -7.95 16 14 H 0.10 2.50 6.35 -52.49 -0.33 2.17 16 15 C 0.04 0.91 5.14 -17.45 -0.09 0.82 16 16 N -0.86 -21.30 10.66 55.49 0.59 -20.71 16 17 Si 0.94 18.83 29.57 -169.99 -5.03 13.81 16 18 H -0.27 -5.41 7.11 56.52 0.40 -5.00 16 19 H -0.28 -5.59 7.11 56.52 0.40 -5.19 16 20 H -0.26 -5.30 7.11 56.52 0.40 -4.90 16 21 C -0.17 -3.72 8.83 -38.74 -0.34 -4.06 16 22 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 23 H 0.06 0.66 8.14 -51.93 -0.42 0.24 16 24 H 0.10 0.74 8.14 -51.93 -0.42 0.32 16 25 H 0.13 2.15 7.71 -52.48 -0.40 1.74 16 26 H 0.06 1.55 7.35 -51.93 -0.38 1.17 16 27 H 0.06 1.44 7.33 -51.93 -0.38 1.06 16 28 H 0.05 1.10 7.16 -51.93 -0.37 0.73 16 29 H 0.28 6.47 8.31 -40.82 -0.34 6.13 16 30 H 0.15 3.27 5.97 -52.48 -0.31 2.95 16 LS Contribution 283.55 15.07 4.27 4.27 Total: -1.00 -26.84 283.55 -6.39 -33.23 By element: Atomic # 1 Polarization: 4.24 SS G_CDS: -2.59 Total: 1.65 kcal Atomic # 6 Polarization: 9.95 SS G_CDS: -0.95 Total: 9.00 kcal Atomic # 7 Polarization: -43.39 SS G_CDS: 0.12 Total: -43.27 kcal Atomic # 8 Polarization: -15.43 SS G_CDS: -0.71 Total: -16.15 kcal Atomic # 14 Polarization: 18.83 SS G_CDS: -5.03 Total: 13.81 kcal Atomic # 17 Polarization: -1.04 SS G_CDS: -1.51 Total: -2.55 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -26.84 -6.39 -33.23 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166800436.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.679 kcal (2) G-P(sol) polarization free energy of solvation -26.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.522 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.229 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds