Wall clock time and date at job start Mon Mar 30 2020 01:07:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34686 * 116.99917 * 2 1 4 4 O 1.21436 * 119.99883 * 359.97438 * 3 2 1 5 5 C 1.47978 * 119.99747 * 179.97438 * 3 2 1 6 6 C 1.39626 * 120.89635 * 0.02562 * 5 3 2 7 7 C 1.39094 * 118.93914 * 179.72674 * 6 5 3 8 8 N 1.38890 * 119.63113 * 180.25355 * 7 6 5 9 9 C 1.46496 * 120.00452 * 184.99937 * 8 7 6 10 10 C 1.36879 * 119.99656 * 4.99671 * 8 7 6 11 11 H 1.08004 * 120.00278 * 24.35138 * 10 8 7 12 12 C 1.38831 * 120.00167 * 204.35421 * 10 8 7 13 13 N 1.31555 * 119.99788 * 10.43753 * 12 10 8 14 14 Si 1.86792 * 119.99798 * 190.44212 * 12 10 8 15 15 H 1.48497 * 109.47583 * 59.99847 * 14 12 10 16 16 H 1.48505 * 109.46994 * 180.02562 * 14 12 10 17 17 H 1.48502 * 109.47376 * 299.99399 * 14 12 10 18 18 N 1.32467 * 120.74750 * 0.27056 * 7 6 5 19 19 C 1.31783 * 121.97946 * 0.02562 * 18 7 6 20 20 C 1.38263 * 120.98376 * 359.97438 * 19 18 7 21 21 Cl 1.73604 * 120.43033 * 179.97438 * 20 19 18 22 22 H 1.09001 * 109.46935 * 60.00536 * 1 2 3 23 23 H 1.08994 * 109.46935 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.46912 * 300.00355 * 1 2 3 25 25 H 1.08007 * 120.53324 * 359.97438 * 6 5 3 26 26 H 1.08996 * 109.47402 * 93.53618 * 9 8 7 27 27 H 1.09004 * 109.46908 * 213.53468 * 9 8 7 28 28 H 1.08998 * 109.46928 * 333.53127 * 9 8 7 29 29 H 0.96997 * 120.00278 * 180.02562 * 13 12 10 30 30 H 1.07998 * 119.50523 * 179.97438 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0635 1.2001 0.0000 4 8 1.4020 2.2185 -0.0005 5 6 3.5412 1.2775 0.0006 6 6 4.3199 0.1185 0.0006 7 6 5.7056 0.2386 -0.0047 8 7 6.4940 -0.9048 -0.0101 9 6 7.9507 -0.7907 0.0949 10 6 5.9098 -2.1383 -0.1135 11 1 4.9370 -2.2385 -0.5719 12 6 6.5677 -3.2608 0.3709 13 7 7.6486 -3.1227 1.1079 14 14 5.9180 -4.9670 -0.0239 15 1 5.9077 -5.1645 -1.4956 16 1 6.7927 -5.9880 0.6069 17 1 4.5368 -5.1052 0.5038 18 7 6.2820 1.4313 -0.0042 19 6 5.5792 2.5461 0.0016 20 6 4.1969 2.5161 0.0071 21 17 3.2853 3.9935 0.0154 22 1 -0.3633 0.5138 -0.8901 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 3.8537 -0.8558 0.0006 26 1 8.2477 -0.8783 1.1400 27 1 8.4201 -1.5861 -0.4840 28 1 8.2683 0.1770 -0.2932 29 1 8.1085 -3.9069 1.4461 30 1 6.0907 3.4973 0.0021 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166800947.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:21 Heat of formation + Delta-G solvation = -29.896723 kcal Electronic energy + Delta-G solvation = -18256.258675 eV Core-core repulsion = 15078.731068 eV Total energy + Delta-G solvation = -3177.527607 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.18521 -39.07141 -36.50884 -35.90832 -35.40909 -32.33386 -31.93082 -28.98752 -27.73976 -26.77126 -24.49780 -23.46885 -22.05410 -20.22375 -17.96437 -17.54057 -16.73398 -16.05204 -15.70243 -15.38154 -15.18846 -14.52428 -14.02301 -13.76654 -13.30651 -13.14161 -12.96306 -12.47433 -12.07437 -11.80438 -11.48132 -11.39020 -11.09540 -11.01977 -10.77709 -10.68347 -10.58509 -10.54282 -9.78649 -9.54939 -9.16615 -8.82098 -8.59248 -7.06638 -6.65801 -4.10794 1.26519 2.00625 2.90694 2.99229 3.02673 3.04573 3.08864 3.15053 3.78132 4.42403 4.47298 4.88498 5.10190 5.23573 5.28871 5.30232 5.61316 5.82317 5.86689 6.37528 6.41301 6.45144 6.58667 6.71221 6.78952 7.08161 7.11651 7.15849 7.65148 8.09655 8.17524 8.67942 8.89446 9.37223 10.28098 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.020219 B = 0.006505 C = 0.004988 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1384.488714 B = 4303.496478 C = 5611.794355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.352 6.352 3 C 0.508 3.492 4 O -0.490 6.490 5 C -0.034 4.034 6 C -0.172 4.172 7 C 0.345 3.655 8 N -0.396 5.396 9 C 0.119 3.881 10 C -0.316 4.316 11 H 0.104 0.896 12 C 0.037 3.963 13 N -0.855 5.855 14 Si 0.935 3.065 15 H -0.269 1.269 16 H -0.279 1.279 17 H -0.267 1.267 18 N -0.546 5.546 19 C 0.179 3.821 20 C -0.181 4.181 21 Cl -0.074 7.074 22 H 0.060 0.940 23 H 0.099 0.901 24 H 0.060 0.940 25 H 0.146 0.854 26 H 0.062 0.938 27 H 0.062 0.938 28 H 0.049 0.951 29 H 0.277 0.723 30 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.199 3.053 -1.759 7.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.269 6.269 3 C 0.352 3.648 4 O -0.377 6.377 5 C -0.042 4.042 6 C -0.200 4.200 7 C 0.103 3.897 8 N -0.081 5.081 9 C -0.024 4.024 10 C -0.445 4.445 11 H 0.122 0.878 12 C -0.171 4.171 13 N -0.489 5.489 14 Si 0.760 3.240 15 H -0.194 1.194 16 H -0.204 1.204 17 H -0.192 1.192 18 N -0.267 5.267 19 C 0.014 3.986 20 C -0.218 4.218 21 Cl -0.046 7.046 22 H 0.079 0.921 23 H 0.117 0.883 24 H 0.079 0.921 25 H 0.163 0.837 26 H 0.080 0.920 27 H 0.081 0.919 28 H 0.068 0.932 29 H 0.087 0.913 30 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -5.210 2.958 -1.640 6.211 hybrid contribution -1.394 -0.770 -0.048 1.593 sum -6.603 2.187 -1.688 7.158 Atomic orbital electron populations 1.23205 0.76732 1.03387 1.02257 1.86611 1.22892 1.32960 1.84421 1.21295 0.89125 0.81310 0.73040 1.90849 1.66622 1.35490 1.44730 1.18718 0.88479 0.93170 1.03847 1.21525 0.92754 0.98084 1.07633 1.18338 0.87791 0.86586 0.97034 1.42668 1.05172 1.01888 1.58365 1.21522 0.79365 0.99220 1.02268 1.19755 1.05601 0.81699 1.37431 0.87842 1.25524 0.96216 1.00879 0.94485 1.70070 1.17688 1.31794 1.29299 0.85841 0.79128 0.79859 0.79171 1.19361 1.20442 1.19193 1.67095 1.39294 0.97010 1.23345 1.21981 0.87876 0.96060 0.92684 1.21025 0.92548 0.85890 1.22300 1.98290 1.74787 1.33952 1.97575 0.92102 0.88281 0.92090 0.83684 0.91961 0.91926 0.93216 0.91286 0.83109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.46 10.56 101.05 1.07 1.53 16 2 O -0.35 -5.93 9.91 -40.46 -0.40 -6.33 16 3 C 0.51 9.63 7.92 34.72 0.27 9.90 16 4 O -0.49 -9.63 13.94 -19.22 -0.27 -9.90 16 5 C -0.03 -0.68 5.91 -104.67 -0.62 -1.30 16 6 C -0.17 -3.66 8.85 -38.75 -0.34 -4.01 16 7 C 0.34 7.82 7.34 -155.09 -1.14 6.68 16 8 N -0.40 -9.45 3.12 -122.47 -0.38 -9.83 16 9 C 0.12 2.68 8.78 59.84 0.53 3.21 16 10 C -0.32 -7.58 8.89 -15.08 -0.13 -7.71 16 11 H 0.10 2.37 6.34 -52.48 -0.33 2.04 16 12 C 0.04 0.87 5.14 -17.45 -0.09 0.78 16 13 N -0.86 -20.84 10.66 55.49 0.59 -20.25 16 14 Si 0.94 18.17 29.57 -169.99 -5.03 13.14 16 15 H -0.27 -5.16 7.11 56.52 0.40 -4.76 16 16 H -0.28 -5.41 7.11 56.52 0.40 -5.01 16 17 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 18 N -0.55 -11.68 8.99 -12.44 -0.11 -11.79 16 19 C 0.18 3.38 10.97 -17.56 -0.19 3.19 16 20 C -0.18 -3.52 6.38 -38.86 -0.25 -3.77 16 21 Cl -0.07 -1.33 26.22 -51.86 -1.36 -2.69 16 22 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 23 H 0.10 0.91 8.14 -51.93 -0.42 0.49 16 24 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 25 H 0.15 3.04 5.94 -52.48 -0.31 2.73 16 26 H 0.06 1.47 7.41 -51.93 -0.38 1.09 16 27 H 0.06 1.42 7.26 -51.93 -0.38 1.04 16 28 H 0.05 1.04 7.19 -51.93 -0.37 0.67 16 29 H 0.28 6.36 8.31 -40.82 -0.34 6.02 16 30 H 0.15 2.36 8.06 -52.49 -0.42 1.94 16 LS Contribution 279.38 15.07 4.21 4.21 Total: -1.00 -26.60 279.38 -6.25 -32.85 By element: Atomic # 1 Polarization: 4.67 SS G_CDS: -2.60 Total: 2.07 kcal Atomic # 6 Polarization: 9.40 SS G_CDS: -0.90 Total: 8.51 kcal Atomic # 7 Polarization: -41.96 SS G_CDS: 0.10 Total: -41.86 kcal Atomic # 8 Polarization: -15.56 SS G_CDS: -0.67 Total: -16.23 kcal Atomic # 14 Polarization: 18.17 SS G_CDS: -5.03 Total: 13.14 kcal Atomic # 17 Polarization: -1.33 SS G_CDS: -1.36 Total: -2.69 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -26.60 -6.25 -32.85 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166800947.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.955 kcal (2) G-P(sol) polarization free energy of solvation -26.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.851 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.897 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds