Wall clock time and date at job start Mon Mar 30 2020 01:27:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.34772 * 120.00056 * 2 1 4 4 O 1.21476 * 120.00196 * 0.02562 * 3 2 1 5 5 C 1.48469 * 120.00134 * 179.97438 * 3 2 1 6 6 C 1.39477 * 120.50016 * 179.97438 * 5 3 2 7 7 C 1.39025 * 118.41048 * 180.02562 * 6 5 3 8 8 Cl 1.73604 * 120.39702 * 180.02562 * 7 6 5 9 9 N 1.32214 * 119.20883 * 0.02562 * 7 6 5 10 10 C 1.32602 * 120.93884 * 359.97438 * 9 7 6 11 11 N 1.38462 * 119.13186 * 180.02562 * 10 9 7 12 12 C 1.46496 * 120.00193 * 179.97438 * 11 10 9 13 13 C 1.36981 * 120.00087 * 359.97057 * 11 10 9 14 14 H 1.08004 * 119.99496 * 22.49796 * 13 11 10 15 15 C 1.38832 * 120.00299 * 202.49122 * 13 11 10 16 16 N 1.31533 * 120.00085 * 11.09239 * 15 13 11 17 17 Si 1.86807 * 119.99812 * 191.08852 * 15 13 11 18 18 H 1.48493 * 109.47083 * 0.02562 * 17 15 13 19 19 H 1.48500 * 109.46733 * 120.00507 * 17 15 13 20 20 H 1.48500 * 109.46948 * 239.99878 * 17 15 13 21 21 N 1.32328 * 121.74288 * 359.97438 * 10 9 7 22 22 H 1.08999 * 109.47163 * 300.00012 * 1 2 3 23 23 H 1.09002 * 109.47259 * 59.99901 * 1 2 3 24 24 H 1.08999 * 109.47127 * 179.97438 * 1 2 3 25 25 H 0.97001 * 119.99890 * 180.02562 * 2 1 3 26 26 H 1.07998 * 120.79462 * 0.05238 * 6 5 3 27 27 H 1.09002 * 109.47402 * 93.89697 * 12 11 10 28 28 H 1.09002 * 109.47339 * 213.89989 * 12 11 10 29 29 H 1.09005 * 109.47039 * 333.89909 * 12 11 10 30 30 H 0.96997 * 120.00499 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 1.5315 2.2192 0.0005 5 6 3.6235 1.1672 0.0006 6 6 4.3314 2.3690 0.0000 7 6 5.7207 2.3183 0.0001 8 17 6.6531 3.7827 0.0001 9 7 6.3234 1.1415 0.0001 10 6 5.6219 0.0163 0.0006 11 7 6.2916 -1.1956 0.0011 12 6 5.5356 -2.4504 0.0022 13 6 7.6612 -1.2213 0.0005 14 1 8.2174 -0.3671 0.3576 15 6 8.3343 -2.3453 -0.4590 16 7 7.6770 -3.2924 -1.0922 17 14 10.1735 -2.5124 -0.1779 18 1 10.6727 -1.3205 0.5537 19 1 10.4428 -3.7333 0.6234 20 1 10.8668 -2.6167 -1.4870 21 7 4.2986 0.0208 0.0016 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 1.9499 -0.8401 -0.0004 26 1 3.8127 3.3162 0.0001 27 1 5.4074 -2.7984 -1.0228 28 1 6.0788 -3.2015 0.5757 29 1 4.5577 -2.2850 0.4546 30 1 8.1472 -4.0775 -1.4136 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166802364.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:31 Heat of formation + Delta-G solvation = 30.157109 kcal Electronic energy + Delta-G solvation = -18135.361111 eV Core-core repulsion = 14992.730384 eV Total energy + Delta-G solvation = -3142.630727 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.062 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -40.29623 -38.92539 -36.57858 -35.94986 -34.48944 -32.76822 -32.36596 -29.85460 -27.43367 -26.70268 -24.72791 -23.95732 -21.66492 -20.51403 -18.61361 -17.34962 -16.79581 -15.91223 -15.44436 -15.24902 -14.87280 -14.56262 -14.36327 -14.00586 -13.56849 -13.33641 -13.02272 -12.72994 -12.25051 -11.76951 -11.54286 -11.41568 -11.09300 -10.89419 -10.72725 -10.50824 -10.16822 -10.02770 -9.90755 -9.50178 -9.04575 -8.97240 -8.39314 -7.44901 -6.69338 -4.07888 1.30477 1.82959 2.23016 3.00259 3.07275 3.13788 3.25220 3.35853 3.72915 4.21946 4.46676 4.68658 4.94474 5.21307 5.50472 5.56693 5.66823 5.76386 6.00843 6.18477 6.36117 6.48931 6.67947 6.83021 7.02741 7.22030 7.48004 7.56441 7.84108 8.17222 8.35413 8.74776 8.93776 9.42580 10.29299 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.017364 B = 0.006539 C = 0.004803 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1612.165745 B = 4280.807875 C = 5828.509439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.088 3.912 2 N -0.718 5.718 3 C 0.580 3.420 4 O -0.533 6.533 5 C 0.189 3.811 6 C -0.301 4.301 7 C 0.282 3.718 8 Cl -0.045 7.045 9 N -0.550 5.550 10 C 0.497 3.503 11 N -0.375 5.375 12 C 0.125 3.875 13 C -0.287 4.287 14 H 0.114 0.886 15 C 0.030 3.970 16 N -0.861 5.861 17 Si 0.939 3.061 18 H -0.263 1.263 19 H -0.277 1.277 20 H -0.277 1.277 21 N -0.567 5.567 22 H 0.059 0.941 23 H 0.059 0.941 24 H 0.075 0.925 25 H 0.415 0.585 26 H 0.142 0.858 27 H 0.066 0.934 28 H 0.069 0.931 29 H 0.047 0.953 30 H 0.275 0.725 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.958 2.156 1.913 7.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.370 5.370 3 C 0.365 3.635 4 O -0.409 6.409 5 C 0.034 3.966 6 C -0.336 4.336 7 C 0.099 3.901 8 Cl -0.017 7.017 9 N -0.278 5.278 10 C 0.145 3.855 11 N -0.063 5.063 12 C -0.018 4.018 13 C -0.417 4.417 14 H 0.132 0.868 15 C -0.177 4.177 16 N -0.496 5.496 17 Si 0.764 3.236 18 H -0.186 1.186 19 H -0.202 1.202 20 H -0.202 1.202 21 N -0.297 5.297 22 H 0.078 0.922 23 H 0.078 0.922 24 H 0.094 0.906 25 H 0.251 0.749 26 H 0.160 0.840 27 H 0.084 0.916 28 H 0.088 0.912 29 H 0.066 0.934 30 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -6.610 1.441 1.815 7.005 hybrid contribution 0.845 0.296 -0.045 0.896 sum -5.766 1.736 1.770 6.276 Atomic orbital electron populations 1.21554 0.79590 1.02227 1.02214 1.45649 1.07442 1.09408 1.74490 1.17966 0.85846 0.83720 0.75948 1.90731 1.68964 1.31439 1.49722 1.20655 0.92879 0.88920 0.94141 1.21407 0.92208 0.99734 1.20238 1.21312 0.87873 0.87880 0.93019 1.98360 1.75170 1.31859 1.96322 1.66934 1.40890 0.96571 1.23385 1.18711 0.83450 0.85942 0.97364 1.42515 1.05682 1.00462 1.57683 1.21580 0.93379 0.84223 1.02589 1.20094 0.79223 1.03374 1.39008 0.86807 1.25578 1.01569 0.95759 0.94800 1.70083 1.37338 1.09259 1.32870 0.85637 0.80500 0.78866 0.78549 1.18644 1.20231 1.20249 1.67595 1.08445 1.28928 1.24725 0.92214 0.92210 0.90585 0.74916 0.84005 0.91601 0.91202 0.93434 0.91452 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.93 10.70 59.84 0.64 1.57 16 2 N -0.72 -10.08 5.71 -67.85 -0.39 -10.47 16 3 C 0.58 10.26 7.83 -12.05 -0.09 10.17 16 4 O -0.53 -10.34 16.42 5.39 0.09 -10.25 16 5 C 0.19 3.73 6.79 -82.67 -0.56 3.17 16 6 C -0.30 -5.92 9.52 -38.83 -0.37 -6.29 16 7 C 0.28 5.84 7.34 -17.10 -0.13 5.72 16 8 Cl -0.05 -0.79 29.15 -51.86 -1.51 -2.30 16 9 N -0.55 -12.97 9.20 -11.00 -0.10 -13.07 16 10 C 0.50 11.78 8.13 -322.80 -2.62 9.15 16 11 N -0.37 -9.13 3.11 -124.48 -0.39 -9.51 16 12 C 0.13 2.71 8.72 59.84 0.52 3.24 16 13 C -0.29 -7.27 9.29 -15.03 -0.14 -7.41 16 14 H 0.11 2.96 7.31 -52.48 -0.38 2.57 16 15 C 0.03 0.72 5.13 -17.46 -0.09 0.63 16 16 N -0.86 -21.06 10.58 55.49 0.59 -20.48 16 17 Si 0.94 18.98 29.57 -169.99 -5.03 13.96 16 18 H -0.26 -5.31 7.11 56.52 0.40 -4.91 16 19 H -0.28 -5.47 7.11 56.52 0.40 -5.07 16 20 H -0.28 -5.61 7.11 56.52 0.40 -5.21 16 21 N -0.57 -11.94 8.30 -10.47 -0.09 -12.03 16 22 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 23 H 0.06 0.64 8.14 -51.93 -0.42 0.21 16 24 H 0.08 0.56 8.14 -51.93 -0.42 0.14 16 25 H 0.41 5.54 8.21 -40.82 -0.34 5.20 16 26 H 0.14 2.58 7.73 -52.49 -0.41 2.17 16 27 H 0.07 1.49 7.44 -51.93 -0.39 1.11 16 28 H 0.07 1.54 7.17 -51.93 -0.37 1.16 16 29 H 0.05 0.91 7.21 -51.93 -0.37 0.54 16 30 H 0.28 6.31 8.31 -40.82 -0.34 5.97 16 LS Contribution 284.62 15.07 4.29 4.29 Total: -1.00 -27.79 284.62 -8.04 -35.83 By element: Atomic # 1 Polarization: 6.76 SS G_CDS: -2.66 Total: 4.10 kcal Atomic # 6 Polarization: 22.79 SS G_CDS: -2.84 Total: 19.94 kcal Atomic # 7 Polarization: -65.18 SS G_CDS: -0.38 Total: -65.56 kcal Atomic # 8 Polarization: -10.34 SS G_CDS: 0.09 Total: -10.25 kcal Atomic # 14 Polarization: 18.98 SS G_CDS: -5.03 Total: 13.96 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.51 Total: -2.30 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -27.79 -8.04 -35.83 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166802364.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.985 kcal (2) G-P(sol) polarization free energy of solvation -27.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.828 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds