Wall clock time and date at job start Mon Mar 30 2020 01:07:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35675 * 117.00267 * 2 1 4 4 C 1.38858 * 120.57075 * 359.97359 * 3 2 1 5 5 N 1.31675 * 120.83854 * 180.02562 * 4 3 2 6 6 C 1.31884 * 122.18793 * 359.97438 * 5 4 3 7 7 C 1.38120 * 121.04969 * 359.72317 * 6 5 4 8 8 Cl 1.73608 * 120.48907 * 180.28803 * 7 6 5 9 9 C 1.40147 * 119.02676 * 0.54700 * 7 6 5 10 10 C 1.47635 * 120.98090 * 179.73139 * 9 7 6 11 11 O 1.21605 * 119.99924 * 269.72549 * 10 9 7 12 12 N 1.34776 * 119.99935 * 89.72480 * 10 9 7 13 13 C 1.46501 * 119.99804 * 359.72969 * 12 10 9 14 14 C 1.36845 * 120.00169 * 180.02562 * 12 10 9 15 15 H 1.08005 * 119.99501 * 338.20305 * 14 12 10 16 16 C 1.39055 * 120.00303 * 158.20649 * 14 12 10 17 17 N 1.31358 * 119.99959 * 344.32173 * 16 14 12 18 18 Si 1.86800 * 120.00185 * 164.32202 * 16 14 12 19 19 H 1.48498 * 109.47036 * 60.00045 * 18 16 14 20 20 H 1.48505 * 109.47261 * 179.97438 * 18 16 14 21 21 H 1.48501 * 109.46977 * 299.99785 * 18 16 14 22 22 H 1.09002 * 109.46476 * 60.00263 * 1 2 3 23 23 H 1.09001 * 109.47102 * 179.97438 * 1 2 3 24 24 H 1.09003 * 109.47120 * 300.00615 * 1 2 3 25 25 H 1.07994 * 119.58146 * 0.02562 * 4 3 2 26 26 H 1.07995 * 119.47657 * 180.02562 * 6 5 4 27 27 H 1.08998 * 109.46674 * 271.98956 * 13 12 10 28 28 H 1.09002 * 109.47112 * 31.99238 * 13 12 10 29 29 H 1.09006 * 109.46958 * 151.99092 * 13 12 10 30 30 H 0.96996 * 120.00152 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2088 0.0000 4 6 1.3004 2.3809 -0.0006 5 7 1.8928 3.5569 -0.0011 6 6 3.2057 3.6822 -0.0006 7 6 4.0273 2.5720 0.0062 8 17 5.7538 2.7539 0.0143 9 6 3.4468 1.2964 0.0010 10 6 4.2841 0.0804 0.0019 11 8 4.6293 -0.4209 -1.0508 12 7 4.6659 -0.4739 1.1696 13 6 4.2549 0.1335 2.4378 14 6 5.4424 -1.6007 1.1705 15 1 5.4633 -2.2428 0.3023 16 6 6.2045 -1.9190 2.2893 17 7 6.4284 -1.0108 3.2115 18 14 6.9097 -3.6382 2.4807 19 1 7.8100 -3.9340 1.3373 20 1 7.6780 -3.7197 3.7489 21 1 5.8024 -4.6273 2.5077 22 1 -0.3632 0.5138 -0.8901 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5139 0.8899 25 1 0.2218 2.3273 -0.0006 26 1 3.6453 4.6686 -0.0006 27 1 4.9838 0.8886 2.7319 28 1 3.2771 0.5998 2.3173 29 1 4.1981 -0.6360 3.2077 30 1 6.9597 -1.2330 3.9920 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001195232633.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:39 Heat of formation + Delta-G solvation = -24.144340 kcal Electronic energy + Delta-G solvation = -18823.216557 eV Core-core repulsion = 15645.938392 eV Total energy + Delta-G solvation = -3177.278165 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.66645 -38.24762 -37.95565 -36.24162 -34.69275 -32.32279 -31.32207 -30.27838 -27.51638 -26.42175 -25.25950 -23.49150 -22.79152 -19.90797 -17.99128 -17.19418 -17.03168 -16.61130 -15.88465 -15.29278 -14.97712 -14.53796 -14.21864 -13.99149 -13.70122 -13.61667 -12.54149 -12.48361 -11.94346 -11.82826 -11.60824 -11.46675 -11.39959 -11.27996 -10.87141 -10.80876 -10.42841 -10.31853 -9.70167 -9.14008 -8.98722 -8.53365 -8.32588 -7.73188 -6.37359 -3.89043 0.99713 1.22901 2.23129 3.16046 3.23371 3.27352 3.28795 3.68364 3.69796 4.08491 4.46496 4.54713 4.74565 4.94986 5.09955 5.10716 5.20040 5.27933 5.38232 5.49014 5.89182 6.05070 6.29136 6.33432 6.82082 7.15172 7.23941 7.53617 7.85666 8.05493 8.43028 9.11573 9.34773 9.90309 10.67020 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.020831 B = 0.007618 C = 0.006291 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1343.839500 B = 3674.593191 C = 4449.571549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.292 6.292 3 C 0.111 3.889 4 C 0.012 3.988 5 N -0.437 5.437 6 C 0.068 3.932 7 C -0.028 4.028 8 Cl -0.028 7.028 9 C -0.068 4.068 10 C 0.489 3.511 11 O -0.573 6.573 12 N -0.419 5.419 13 C 0.114 3.886 14 C -0.307 4.307 15 H 0.101 0.899 16 C 0.034 3.966 17 N -0.873 5.873 18 Si 0.927 3.073 19 H -0.271 1.271 20 H -0.283 1.283 21 H -0.273 1.273 22 H 0.057 0.943 23 H 0.104 0.896 24 H 0.058 0.942 25 H 0.164 0.836 26 H 0.168 0.832 27 H 0.057 0.943 28 H 0.019 0.981 29 H 0.076 0.924 30 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.629 6.647 -0.923 11.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.203 6.203 3 C 0.061 3.939 4 C -0.146 4.146 5 N -0.147 5.147 6 C -0.090 4.090 7 C -0.058 4.058 8 Cl 0.001 6.999 9 C -0.080 4.080 10 C 0.275 3.725 11 O -0.457 6.457 12 N -0.136 5.136 13 C -0.030 4.030 14 C -0.435 4.435 15 H 0.119 0.881 16 C -0.171 4.171 17 N -0.511 5.511 18 Si 0.754 3.246 19 H -0.197 1.197 20 H -0.209 1.209 21 H -0.198 1.198 22 H 0.076 0.924 23 H 0.123 0.877 24 H 0.077 0.923 25 H 0.181 0.819 26 H 0.185 0.815 27 H 0.076 0.924 28 H 0.038 0.962 29 H 0.094 0.906 30 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -9.619 6.916 -1.205 11.909 hybrid contribution 0.762 -1.282 0.345 1.530 sum -8.858 5.635 -0.860 10.533 Atomic orbital electron populations 1.23171 0.78063 1.04608 1.01320 1.86209 1.21364 1.25217 1.87485 1.20068 0.91303 0.86220 0.96305 1.22882 1.00521 0.86804 1.04424 1.67447 1.10942 1.26189 1.10127 1.22491 0.88169 0.97752 1.00596 1.22009 0.87683 0.93542 1.02586 1.98415 1.07735 1.97497 1.96248 1.20086 0.91519 0.95563 1.00879 1.17274 0.85720 0.84148 0.85329 1.90644 1.60600 1.63500 1.30985 1.43378 1.43140 1.23578 1.03471 1.21478 0.95384 0.98923 0.87236 1.19615 1.22154 0.98952 1.02752 0.88085 1.25361 0.96030 0.99379 0.96287 1.69999 1.37439 1.32614 1.11027 0.85983 0.78992 0.81968 0.77701 1.19650 1.20881 1.19813 0.92402 0.87717 0.92325 0.81876 0.81537 0.92448 0.96199 0.90574 0.92009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.25 9.82 101.05 0.99 1.24 16 2 O -0.29 -5.11 10.03 -18.73 -0.19 -5.30 16 3 C 0.11 1.99 6.32 -38.52 -0.24 1.75 16 4 C 0.01 0.18 10.22 -17.39 -0.18 0.00 16 5 N -0.44 -6.72 10.32 -13.15 -0.14 -6.85 16 6 C 0.07 1.06 10.97 -17.57 -0.19 0.86 16 7 C -0.03 -0.53 6.38 -38.91 -0.25 -0.78 16 8 Cl -0.03 -0.53 28.17 -51.86 -1.46 -1.99 16 9 C -0.07 -1.44 3.98 -104.51 -0.42 -1.85 16 10 C 0.49 12.67 5.89 -12.43 -0.07 12.60 16 11 O -0.57 -16.85 16.79 5.27 0.09 -16.76 16 12 N -0.42 -11.10 3.01 -123.35 -0.37 -11.47 16 13 C 0.11 2.67 8.50 59.85 0.51 3.18 16 14 C -0.31 -8.65 9.28 -15.01 -0.14 -8.79 16 15 H 0.10 2.97 7.41 -52.48 -0.39 2.58 16 16 C 0.03 0.89 5.00 -17.45 -0.09 0.81 16 17 N -0.87 -23.13 10.81 55.50 0.60 -22.53 16 18 Si 0.93 20.65 29.58 -169.99 -5.03 15.63 16 19 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 20 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 21 H -0.27 -5.98 7.11 56.52 0.40 -5.57 16 22 H 0.06 0.51 7.68 -51.93 -0.40 0.11 16 23 H 0.10 0.94 8.14 -51.93 -0.42 0.52 16 24 H 0.06 0.51 7.68 -51.93 -0.40 0.11 16 25 H 0.16 1.76 6.32 -52.49 -0.33 1.43 16 26 H 0.17 2.04 8.06 -52.49 -0.42 1.61 16 27 H 0.06 1.38 7.75 -51.93 -0.40 0.98 16 28 H 0.02 0.41 6.64 -51.93 -0.34 0.07 16 29 H 0.08 1.84 6.85 -51.93 -0.36 1.48 16 30 H 0.27 6.75 8.31 -40.82 -0.34 6.41 16 LS Contribution 281.23 15.07 4.24 4.24 Total: -1.00 -32.80 281.23 -4.94 -37.73 By element: Atomic # 1 Polarization: 0.91 SS G_CDS: -2.60 Total: -1.70 kcal Atomic # 6 Polarization: 9.09 SS G_CDS: -0.08 Total: 9.02 kcal Atomic # 7 Polarization: -40.95 SS G_CDS: 0.09 Total: -40.86 kcal Atomic # 8 Polarization: -21.97 SS G_CDS: -0.10 Total: -22.07 kcal Atomic # 14 Polarization: 20.65 SS G_CDS: -5.03 Total: 15.63 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.46 Total: -1.99 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -32.80 -4.94 -37.73 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001195232633.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.587 kcal (2) G-P(sol) polarization free energy of solvation -32.796 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.935 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds