Wall clock time and date at job start Mon Mar 30 2020 01:07:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35949 * 117.00075 * 2 1 4 4 C 1.38846 * 120.38101 * 359.97438 * 3 2 1 5 5 N 1.31899 * 121.04069 * 180.02562 * 4 3 2 6 6 C 1.31783 * 121.92767 * 0.02562 * 5 4 3 7 7 Cl 1.73602 * 119.67841 * 179.97438 * 6 5 4 8 8 C 1.39770 * 120.63933 * 359.97438 * 6 5 4 9 9 C 1.47662 * 120.54599 * 179.97438 * 8 6 5 10 10 O 1.21591 * 120.00271 * 308.54404 * 9 8 6 11 11 N 1.34774 * 119.99805 * 128.54130 * 9 8 6 12 12 C 1.46495 * 120.00078 * 184.33477 * 11 9 8 13 13 C 1.36892 * 120.00171 * 4.33616 * 11 9 8 14 14 H 1.07999 * 119.99564 * 350.63634 * 13 11 9 15 15 C 1.39038 * 120.00105 * 170.63696 * 13 11 9 16 16 N 1.31371 * 119.99971 * 5.54684 * 15 13 11 17 17 Si 1.86798 * 120.00107 * 185.54274 * 15 13 11 18 18 H 1.48499 * 109.46920 * 359.97438 * 17 15 13 19 19 H 1.48495 * 109.47014 * 119.99869 * 17 15 13 20 20 H 1.48500 * 109.47249 * 240.00421 * 17 15 13 21 21 C 1.38800 * 120.38307 * 180.02562 * 3 2 1 22 22 H 1.08994 * 109.46820 * 60.00171 * 1 2 3 23 23 H 1.09001 * 109.47017 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.46694 * 300.00163 * 1 2 3 25 25 H 1.07997 * 119.47901 * 359.74721 * 4 3 2 26 26 H 1.09004 * 109.47245 * 3.74885 * 12 11 9 27 27 H 1.09009 * 109.47614 * 123.75090 * 12 11 9 28 28 H 1.08998 * 109.47122 * 243.74906 * 12 11 9 29 29 H 0.96998 * 120.00149 * 180.02562 * 16 15 13 30 30 H 1.08002 * 120.87620 * 359.94828 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 1.2978 2.3808 -0.0005 5 7 1.8830 3.5628 -0.0010 6 6 3.1946 3.6911 -0.0016 7 17 3.9032 5.2759 -0.0029 8 6 4.0206 2.5636 -0.0011 9 6 5.4900 2.7097 -0.0022 10 8 6.0295 3.4220 -0.8269 11 7 6.2331 2.0536 0.9108 12 6 7.6805 2.2718 0.9708 13 6 5.6355 1.1832 1.7821 14 1 4.5583 1.1336 1.8420 15 6 6.4152 0.3632 2.5900 16 7 7.7218 0.4991 2.5973 17 14 5.6049 -0.9317 3.6652 18 1 4.1328 -0.8812 3.4765 19 1 6.1074 -2.2762 3.2847 20 1 5.9301 -0.6665 5.0897 21 6 3.4318 1.2932 -0.0005 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 0.2194 2.3216 -0.0051 26 1 7.9621 3.0408 0.2514 27 1 7.9581 2.5940 1.9745 28 1 8.1981 1.3430 0.7312 29 1 8.2659 -0.0732 3.1606 30 1 4.0398 0.4006 -0.0001 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001199262644.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:07:36 Heat of formation + Delta-G solvation = -19.062067 kcal Electronic energy + Delta-G solvation = -18636.160986 eV Core-core repulsion = 15459.103204 eV Total energy + Delta-G solvation = -3177.057781 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.51829 -38.68351 -37.59255 -35.95589 -34.90256 -32.43555 -31.47070 -30.05142 -27.59440 -26.53234 -25.00956 -23.43113 -22.64545 -19.61069 -18.42018 -17.26398 -16.82835 -16.52066 -16.05508 -15.71179 -14.45559 -14.41716 -14.33118 -13.82861 -13.56857 -13.16655 -12.95103 -12.47841 -11.99467 -11.82622 -11.72091 -11.54125 -11.10613 -10.86032 -10.81895 -10.63555 -10.55526 -10.47521 -9.57224 -9.27289 -9.13727 -8.50800 -8.12144 -8.03589 -6.46231 -4.03081 1.09167 1.43203 2.32865 2.99675 3.11228 3.15104 3.20828 3.61160 3.91236 4.03760 4.50363 4.67400 4.88875 4.93969 5.05155 5.06833 5.25533 5.37210 5.52345 5.89120 6.01081 6.32233 6.49845 6.80802 7.15434 7.24638 7.27278 7.36661 7.58723 7.90950 8.22265 8.88250 9.32200 9.73497 10.45696 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.014245 B = 0.009602 C = 0.006275 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1965.110412 B = 2915.510265 C = 4461.255479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.307 6.307 3 C 0.068 3.932 4 C 0.028 3.972 5 N -0.451 5.451 6 C 0.164 3.836 7 Cl -0.018 7.018 8 C -0.068 4.068 9 C 0.478 3.522 10 O -0.590 6.590 11 N -0.421 5.421 12 C 0.120 3.880 13 C -0.336 4.336 14 H 0.105 0.895 15 C 0.039 3.961 16 N -0.864 5.864 17 Si 0.924 3.076 18 H -0.265 1.265 19 H -0.276 1.276 20 H -0.278 1.278 21 C -0.062 4.062 22 H 0.056 0.944 23 H 0.101 0.899 24 H 0.057 0.943 25 H 0.162 0.838 26 H 0.040 0.960 27 H 0.064 0.936 28 H 0.073 0.927 29 H 0.270 0.730 30 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.975 -1.691 -1.510 11.207 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.219 6.219 3 C 0.021 3.979 4 C -0.131 4.131 5 N -0.163 5.163 6 C -0.002 4.002 7 Cl 0.011 6.989 8 C -0.075 4.075 9 C 0.265 3.735 10 O -0.477 6.477 11 N -0.136 5.136 12 C -0.022 4.022 13 C -0.464 4.464 14 H 0.123 0.877 15 C -0.167 4.167 16 N -0.502 5.502 17 Si 0.750 3.250 18 H -0.189 1.189 19 H -0.202 1.202 20 H -0.204 1.204 21 C -0.089 4.089 22 H 0.075 0.925 23 H 0.119 0.881 24 H 0.075 0.925 25 H 0.179 0.821 26 H 0.058 0.942 27 H 0.083 0.917 28 H 0.092 0.908 29 H 0.081 0.919 30 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -10.833 -0.772 -1.768 11.003 hybrid contribution -0.134 -1.236 0.815 1.487 sum -10.967 -2.008 -0.953 11.190 Atomic orbital electron populations 1.23098 0.78463 1.04148 1.01428 1.86128 1.21226 1.25775 1.88774 1.19930 0.92990 0.85651 0.99341 1.22659 1.00039 0.86174 1.04217 1.66804 1.10551 1.26933 1.11986 1.21469 0.88753 0.87611 1.02406 1.98387 1.81455 1.22679 1.96427 1.20647 0.96811 0.91324 0.98683 1.17295 0.84823 0.86068 0.85328 1.90674 1.71808 1.44592 1.40638 1.43690 1.07476 1.35023 1.27406 1.21669 0.79471 1.00537 1.00535 1.20033 0.93491 1.15161 1.17721 0.87726 1.25362 0.95391 0.98286 0.97633 1.70210 1.04098 1.37832 1.38043 0.85877 0.79621 0.80122 0.79374 1.18896 1.20152 1.20355 1.21245 0.91307 0.98545 0.97842 0.92520 0.88066 0.92468 0.82107 0.94159 0.91725 0.90840 0.91874 0.81921 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.22 9.82 101.05 0.99 1.21 16 2 O -0.31 -4.41 10.51 -19.58 -0.21 -4.61 16 3 C 0.07 1.13 6.70 -39.15 -0.26 0.87 16 4 C 0.03 0.43 10.21 -17.30 -0.18 0.25 16 5 N -0.45 -8.36 10.32 -9.89 -0.10 -8.47 16 6 C 0.16 3.39 7.30 -17.00 -0.12 3.27 16 7 Cl -0.02 -0.36 27.43 -51.86 -1.42 -1.79 16 8 C -0.07 -1.49 5.02 -104.81 -0.53 -2.02 16 9 C 0.48 11.84 6.66 -12.41 -0.08 11.76 16 10 O -0.59 -15.71 15.35 5.29 0.08 -15.63 16 11 N -0.42 -10.65 3.02 -123.34 -0.37 -11.02 16 12 C 0.12 2.95 8.87 59.84 0.53 3.48 16 13 C -0.34 -8.32 8.37 -15.00 -0.13 -8.44 16 14 H 0.11 2.49 5.09 -52.49 -0.27 2.22 16 15 C 0.04 0.94 5.46 -17.45 -0.10 0.85 16 16 N -0.86 -21.56 9.48 55.50 0.53 -21.04 16 17 Si 0.92 18.89 29.56 -169.99 -5.02 13.86 16 18 H -0.26 -5.31 7.11 56.52 0.40 -4.91 16 19 H -0.28 -5.60 7.11 56.52 0.40 -5.20 16 20 H -0.28 -5.69 7.11 56.52 0.40 -5.29 16 21 C -0.06 -1.21 7.55 -38.71 -0.29 -1.51 16 22 H 0.06 0.43 7.67 -51.93 -0.40 0.03 16 23 H 0.10 0.69 8.14 -51.93 -0.42 0.27 16 24 H 0.06 0.46 7.68 -51.93 -0.40 0.06 16 25 H 0.16 1.84 6.30 -52.49 -0.33 1.51 16 26 H 0.04 0.96 6.93 -51.93 -0.36 0.60 16 27 H 0.06 1.61 7.24 -51.92 -0.38 1.24 16 28 H 0.07 1.84 6.87 -51.93 -0.36 1.48 16 29 H 0.27 6.35 8.31 -40.82 -0.34 6.01 16 30 H 0.16 3.19 7.18 -52.49 -0.38 2.81 16 LS Contribution 274.36 15.07 4.13 4.13 Total: -1.00 -29.04 274.36 -4.97 -34.01 By element: Atomic # 1 Polarization: 3.26 SS G_CDS: -2.42 Total: 0.84 kcal Atomic # 6 Polarization: 9.88 SS G_CDS: -0.16 Total: 9.72 kcal Atomic # 7 Polarization: -40.58 SS G_CDS: 0.05 Total: -40.53 kcal Atomic # 8 Polarization: -20.12 SS G_CDS: -0.12 Total: -20.25 kcal Atomic # 14 Polarization: 18.89 SS G_CDS: -5.02 Total: 13.86 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.42 Total: -1.79 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -29.04 -4.97 -34.01 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001199262644.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.945 kcal (2) G-P(sol) polarization free energy of solvation -29.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds