Wall clock time and date at job start Mon Mar 30 2020 00:48:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09009 * 109.46602 * 60.00278 * 5 3 2 7 7 O 1.42891 * 109.47292 * 179.97438 * 5 3 2 8 8 C 1.34924 * 117.00658 * 270.00352 * 7 5 3 9 9 H 1.08003 * 119.99744 * 0.02562 * 8 7 5 10 10 C 1.38633 * 120.00580 * 180.02562 * 8 7 5 11 11 N 1.31581 * 119.99727 * 359.97438 * 10 8 7 12 12 Si 1.86799 * 120.00272 * 179.97438 * 10 8 7 13 13 H 1.48502 * 109.47112 * 90.00025 * 12 10 8 14 14 H 1.48498 * 109.47553 * 209.99810 * 12 10 8 15 15 H 1.48502 * 109.47022 * 330.00085 * 12 10 8 16 16 C 1.50692 * 109.47099 * 300.00642 * 5 3 2 17 17 C 1.38260 * 119.99615 * 99.99670 * 16 5 3 18 18 C 1.38224 * 120.02656 * 179.97438 * 17 16 5 19 19 C 1.38236 * 120.01273 * 359.97438 * 18 17 16 20 20 C 1.38329 * 119.98852 * 359.97438 * 19 18 17 21 21 Cl 1.73598 * 120.01270 * 180.02562 * 20 19 18 22 22 C 1.38196 * 119.99337 * 279.71574 * 16 5 3 23 23 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 24 24 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 26 26 H 0.97008 * 119.99748 * 180.02562 * 11 10 8 27 27 H 1.08000 * 119.98603 * 359.97438 * 17 16 5 28 28 H 1.08005 * 119.99137 * 179.97438 * 18 17 16 29 29 H 1.08007 * 120.00079 * 180.02562 * 19 18 17 30 30 H 1.08011 * 120.00362 * 0.02564 * 22 16 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 3.9564 0.7807 -0.8893 7 8 3.9714 2.6453 -0.0001 8 6 4.1456 3.2320 -1.2026 9 1 3.9787 2.6676 -2.1081 10 6 4.5386 4.5595 -1.2758 11 7 4.7413 5.2473 -0.1726 12 14 4.7803 5.3716 -2.9406 13 1 3.5019 5.9842 -3.3828 14 1 5.8219 6.4244 -2.8313 15 1 5.2093 4.3518 -3.9311 16 6 4.1047 0.5920 1.2313 17 6 4.5993 -0.6963 1.1463 18 6 5.0938 -1.3232 2.2747 19 6 5.0945 -0.6620 3.4887 20 6 4.6007 0.6273 3.5741 21 17 4.6020 1.4584 5.0982 22 6 4.1093 1.2556 2.4434 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 -0.8900 26 1 5.0160 6.1763 -0.2238 27 1 4.5993 -1.2131 0.1980 28 1 5.4796 -2.3297 2.2077 29 1 5.4813 -1.1519 4.3701 30 1 3.7267 2.2636 2.5088 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001224381826.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:48:26 Heat of formation + Delta-G solvation = -95.713449 kcal Electronic energy + Delta-G solvation = -18306.200325 eV Core-core repulsion = 15093.525939 eV Total energy + Delta-G solvation = -3212.674386 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.049 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.06242 -38.89025 -36.77389 -36.14607 -35.43097 -32.41556 -31.11153 -30.49606 -28.05159 -26.21397 -24.38641 -22.40624 -21.97864 -20.21878 -17.89202 -17.36008 -16.61821 -16.33700 -15.79844 -15.42997 -15.15075 -14.59834 -13.90330 -13.61377 -13.52642 -13.32723 -13.05919 -12.59458 -11.94686 -11.79194 -11.53783 -11.32679 -11.24204 -11.15960 -10.98933 -10.64717 -10.55761 -10.32645 -10.26090 -9.62145 -9.49513 -8.62507 -8.44786 -8.15841 -6.06679 -3.73207 1.35166 1.51984 2.37458 2.86386 3.15831 3.29665 3.30706 3.33783 3.85602 4.23473 4.88123 4.99077 5.25406 5.26233 5.36222 5.39070 5.41881 5.44760 5.60655 5.75365 5.80988 5.91373 6.02023 6.18286 6.48887 6.50037 6.80488 6.88001 7.03333 7.32927 8.27203 8.42521 9.34302 9.83959 11.12287 Molecular weight = 270.05amu Principal moments of inertia in cm(-1) A = 0.015149 B = 0.006905 C = 0.005578 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1847.857987 B = 4054.157893 C = 5018.835433 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.368 6.368 3 C 0.428 3.572 4 O -0.477 6.477 5 C 0.148 3.852 6 H 0.092 0.908 7 O -0.240 6.240 8 C -0.375 4.375 9 H 0.069 0.931 10 C 0.035 3.965 11 N -0.876 5.876 12 Si 0.929 3.071 13 H -0.279 1.279 14 H -0.281 1.281 15 H -0.273 1.273 16 C -0.057 4.057 17 C -0.095 4.095 18 C -0.116 4.116 19 C -0.113 4.113 20 C -0.038 4.038 21 Cl -0.078 7.078 22 C -0.070 4.070 23 H 0.057 0.943 24 H 0.093 0.907 25 H 0.057 0.943 26 H 0.262 0.738 27 H 0.131 0.869 28 H 0.131 0.869 29 H 0.129 0.871 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.661 -13.874 4.329 14.628 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.286 6.286 3 C 0.269 3.731 4 O -0.360 6.360 5 C 0.085 3.915 6 H 0.109 0.891 7 O -0.153 6.153 8 C -0.454 4.454 9 H 0.086 0.914 10 C -0.166 4.166 11 N -0.517 5.517 12 Si 0.756 3.244 13 H -0.205 1.205 14 H -0.207 1.207 15 H -0.198 1.198 16 C -0.058 4.058 17 C -0.113 4.113 18 C -0.134 4.134 19 C -0.132 4.132 20 C -0.065 4.065 21 Cl -0.049 7.049 22 C -0.089 4.089 23 H 0.075 0.925 24 H 0.111 0.889 25 H 0.076 0.924 26 H 0.072 0.928 27 H 0.149 0.851 28 H 0.149 0.851 29 H 0.147 0.853 30 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -1.806 -13.175 4.696 14.103 hybrid contribution -0.276 0.561 -0.889 1.087 sum -2.082 -12.614 3.807 13.339 Atomic orbital electron populations 1.23114 0.78139 1.02651 1.02129 1.86574 1.22201 1.34955 1.84867 1.25708 0.93445 0.81210 0.72778 1.90659 1.66274 1.36238 1.42872 1.20136 0.85116 0.90184 0.96018 0.89067 1.85860 1.82364 1.16897 1.30204 1.20870 1.47026 0.95142 0.82331 0.91378 1.24956 0.98072 0.95274 0.98267 1.70022 1.46262 1.09152 1.26234 0.85912 0.78041 0.79185 0.81283 1.20489 1.20677 1.19816 1.19467 0.98952 0.93875 0.93508 1.21055 0.97222 0.93879 0.99152 1.20951 1.00596 0.99987 0.91843 1.20989 1.00384 0.93110 0.98714 1.20874 1.04436 0.93926 0.87245 1.98350 1.97368 1.78740 1.30427 1.21094 0.97014 1.00665 0.90138 0.92460 0.88880 0.92407 0.92842 0.85148 0.85139 0.85323 0.83791 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.47 10.56 101.05 1.07 1.54 16 2 O -0.37 -6.45 10.48 -39.25 -0.41 -6.86 16 3 C 0.43 9.22 7.27 36.01 0.26 9.48 16 4 O -0.48 -12.08 16.20 -25.48 -0.41 -12.49 16 5 C 0.15 3.19 2.87 -29.04 -0.08 3.11 16 6 H 0.09 1.78 7.66 -51.92 -0.40 1.39 16 7 O -0.24 -6.65 8.29 -36.45 -0.30 -6.95 16 8 C -0.38 -10.75 9.71 30.88 0.30 -10.45 16 9 H 0.07 1.82 7.64 -52.48 -0.40 1.42 16 10 C 0.03 1.01 5.49 -17.51 -0.10 0.91 16 11 N -0.88 -27.06 13.67 55.48 0.76 -26.30 16 12 Si 0.93 21.87 29.55 -169.99 -5.02 16.85 16 13 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 14 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 15 H -0.27 -6.11 7.11 56.52 0.40 -5.71 16 16 C -0.06 -1.07 4.90 -104.63 -0.51 -1.58 16 17 C -0.09 -1.39 9.67 -39.58 -0.38 -1.77 16 18 C -0.12 -1.45 10.05 -39.59 -0.40 -1.85 16 19 C -0.11 -1.52 9.83 -39.55 -0.39 -1.91 16 20 C -0.04 -0.63 6.32 -39.50 -0.25 -0.87 16 21 Cl -0.08 -1.19 28.96 -51.86 -1.50 -2.69 16 22 C -0.07 -1.36 9.14 -39.55 -0.36 -1.72 16 23 H 0.06 0.80 8.13 -51.93 -0.42 0.38 16 24 H 0.09 0.92 8.14 -51.93 -0.42 0.50 16 25 H 0.06 0.80 8.13 -51.93 -0.42 0.38 16 26 H 0.26 7.53 8.31 -40.82 -0.34 7.20 16 27 H 0.13 1.58 8.04 -52.49 -0.42 1.16 16 28 H 0.13 1.18 8.06 -52.48 -0.42 0.76 16 29 H 0.13 1.39 8.06 -52.48 -0.42 0.96 16 30 H 0.14 3.18 7.77 -52.48 -0.41 2.77 16 LS Contribution 294.23 15.07 4.43 4.43 Total: -1.00 -33.96 294.23 -6.18 -40.13 By element: Atomic # 1 Polarization: 1.87 SS G_CDS: -2.88 Total: -1.00 kcal Atomic # 6 Polarization: -4.28 SS G_CDS: -0.84 Total: -5.12 kcal Atomic # 7 Polarization: -27.06 SS G_CDS: 0.76 Total: -26.30 kcal Atomic # 8 Polarization: -25.18 SS G_CDS: -1.13 Total: -26.30 kcal Atomic # 14 Polarization: 21.87 SS G_CDS: -5.02 Total: 16.85 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.50 Total: -2.69 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -33.96 -6.18 -40.13 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001224381826.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.579 kcal (2) G-P(sol) polarization free energy of solvation -33.956 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.535 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds