Wall clock time and date at job start Mon Mar 30 2020 01:05:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.09003 * 109.47184 * 2 1 4 4 C 1.50696 * 109.46983 * 120.00453 * 2 1 3 5 5 H 1.08009 * 119.99710 * 120.00044 * 4 2 1 6 6 C 1.37874 * 120.00200 * 299.99502 * 4 2 1 7 7 N 1.31516 * 119.99850 * 0.02562 * 6 4 2 8 8 Si 1.86798 * 119.99997 * 180.02562 * 6 4 2 9 9 H 1.48503 * 109.47427 * 60.00283 * 8 6 4 10 10 H 1.48499 * 109.47143 * 180.02562 * 8 6 4 11 11 H 1.48507 * 109.47226 * 300.00191 * 8 6 4 12 12 N 1.46505 * 109.46864 * 240.00445 * 2 1 3 13 13 C 1.34772 * 120.00042 * 84.99752 * 12 2 1 14 14 O 1.21626 * 120.00089 * 0.02562 * 13 12 2 15 15 C 1.47282 * 120.00239 * 179.97438 * 13 12 2 16 16 C 1.38012 * 120.87446 * 359.97438 * 15 13 12 17 17 N 1.34312 * 120.39527 * 180.02562 * 16 15 13 18 18 H 0.97002 * 118.80324 * 179.97438 * 17 16 15 19 19 C 1.35647 * 122.39283 * 359.73883 * 17 16 15 20 20 C 1.34937 * 121.77691 * 0.53594 * 19 17 16 21 21 Cl 1.73599 * 120.34122 * 179.75923 * 20 19 17 22 22 C 1.41751 * 119.32040 * 359.47831 * 20 19 17 23 23 O 1.22103 * 121.06784 * 180.27274 * 22 20 19 24 24 H 1.08997 * 109.46922 * 299.99248 * 1 2 3 25 25 H 1.09000 * 109.47358 * 59.99425 * 1 2 3 26 26 H 1.08998 * 109.47200 * 179.97438 * 1 2 3 27 27 H 0.96998 * 119.99606 * 179.97438 * 7 6 4 28 28 H 0.96995 * 120.00034 * 265.00281 * 12 2 1 29 29 H 1.08002 * 119.80271 * 359.97438 * 16 15 13 30 30 H 1.07995 * 119.11164 * 180.29042 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0323 -0.7105 1.2304 5 1 2.6533 -1.5887 1.1312 6 6 1.6994 -0.2395 2.4827 7 7 0.9429 0.8295 2.6034 8 14 2.3226 -1.1198 4.0078 9 1 3.8076 -1.1193 4.0076 10 1 1.8271 -0.4203 5.2203 11 1 1.8281 -2.5202 4.0079 12 7 2.0183 -0.6905 -1.1963 13 6 2.1470 -0.0182 -2.3572 14 8 1.8582 1.1621 -2.4116 15 6 2.6384 -0.7122 -3.5597 16 6 2.9728 -2.0505 -3.5180 17 7 3.4205 -2.6738 -4.6203 18 1 3.6493 -3.6148 -4.5649 19 6 3.5600 -2.0363 -5.8095 20 6 3.2651 -0.7274 -5.9530 21 17 3.4634 0.0527 -7.4911 22 6 2.7861 0.0027 -4.8364 23 8 2.5049 1.1871 -4.9315 24 1 -0.3633 0.5137 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 0.7084 1.1606 3.4845 28 1 2.2490 -1.6317 -1.1528 29 1 2.8748 -2.5998 -2.5933 30 1 3.9204 -2.5904 -6.6636 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001324461763.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:23 Heat of formation + Delta-G solvation = -43.102689 kcal Electronic energy + Delta-G solvation = -17973.759552 eV Core-core repulsion = 14795.659291 eV Total energy + Delta-G solvation = -3178.100261 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.92927 -38.50982 -37.64534 -36.52409 -34.65619 -32.67781 -31.62667 -31.30689 -28.60894 -25.25380 -24.64821 -23.29633 -21.58809 -19.84488 -19.24526 -17.56367 -17.20473 -16.38455 -15.54977 -15.37496 -15.19402 -15.04859 -14.19227 -13.74766 -13.59372 -13.23099 -13.10478 -12.77137 -12.29821 -12.04350 -11.65195 -11.18399 -11.09272 -10.95869 -10.70976 -10.31940 -10.22130 -9.61976 -9.57643 -9.03664 -8.85753 -8.53459 -8.13949 -7.81775 -6.10893 -4.20970 0.68865 1.13755 1.81615 2.68738 3.24234 3.26172 3.30033 3.31082 3.90325 4.10366 4.15375 4.35027 4.49631 4.75998 4.91345 5.20951 5.33675 5.53418 6.03371 6.35577 6.53301 6.87193 7.01942 7.18985 7.50384 7.58466 7.71078 7.94985 8.07956 8.17632 8.67545 8.80965 9.19552 9.46864 10.95020 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.038732 B = 0.004237 C = 0.003949 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 722.743469 B = 6606.461988 C = 7088.056497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.266 3.734 3 H 0.050 0.950 4 C -0.535 4.535 5 H 0.060 0.940 6 C 0.067 3.933 7 N -0.881 5.881 8 Si 0.902 3.098 9 H -0.277 1.277 10 H -0.286 1.286 11 H -0.277 1.277 12 N -0.711 5.711 13 C 0.556 3.444 14 O -0.520 6.520 15 C -0.268 4.268 16 C 0.155 3.845 17 N -0.574 5.574 18 H 0.427 0.573 19 C 0.137 3.863 20 C -0.192 4.192 21 Cl -0.036 7.036 22 C 0.408 3.592 23 O -0.450 6.450 24 H 0.090 0.910 25 H 0.016 0.984 26 H 0.025 0.975 27 H 0.265 0.735 28 H 0.380 0.620 29 H 0.177 0.823 30 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.287 -13.716 -15.550 21.667 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.165 3.835 3 H 0.068 0.932 4 C -0.573 4.573 5 H 0.078 0.922 6 C -0.137 4.137 7 N -0.518 5.518 8 Si 0.729 3.271 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.202 1.202 12 N -0.361 5.361 13 C 0.341 3.659 14 O -0.396 6.396 15 C -0.279 4.279 16 C 0.025 3.975 17 N -0.181 5.181 18 H 0.264 0.736 19 C 0.009 3.991 20 C -0.227 4.227 21 Cl -0.008 7.008 22 C 0.290 3.710 23 O -0.327 6.327 24 H 0.108 0.892 25 H 0.035 0.965 26 H 0.044 0.956 27 H 0.075 0.925 28 H 0.213 0.787 29 H 0.194 0.806 30 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 5.823 -11.928 -15.593 20.477 hybrid contribution 0.594 -1.526 0.743 1.798 sum 6.417 -13.454 -14.850 21.040 Atomic orbital electron populations 1.22080 0.98442 0.99016 1.01046 1.18744 0.91030 0.94122 0.79633 0.93180 1.21147 1.32618 1.13237 0.90346 0.92233 1.24888 0.94828 0.94951 0.99016 1.69899 1.35619 1.22331 1.23998 0.86515 0.79122 0.79497 0.81947 1.20213 1.21122 1.20239 1.46443 1.66234 1.12938 1.10457 1.17407 0.79389 0.86916 0.82208 1.90836 1.49514 1.14981 1.84249 1.22730 1.13196 0.93475 0.98449 1.22391 0.90970 0.93787 0.90374 1.40594 1.56182 1.14218 1.07109 0.73603 1.21434 0.95701 0.93017 0.88927 1.22153 1.15001 0.94171 0.91336 1.98355 1.96068 1.80812 1.25550 1.17987 0.78580 0.88867 0.85536 1.90875 1.41718 1.15186 1.84916 0.89152 0.96486 0.95564 0.92475 0.78726 0.80625 0.81075 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.71 9.26 37.16 0.34 -3.37 16 2 C 0.27 6.82 2.56 -69.08 -0.18 6.65 16 3 H 0.05 1.51 7.58 -51.93 -0.39 1.11 16 4 C -0.53 -13.91 8.73 -34.44 -0.30 -14.21 16 5 H 0.06 1.44 7.74 -52.48 -0.41 1.03 16 6 C 0.07 1.78 5.30 -17.82 -0.09 1.68 16 7 N -0.88 -24.88 11.32 55.43 0.63 -24.25 16 8 Si 0.90 20.25 29.54 -169.99 -5.02 15.23 16 9 H -0.28 -6.16 7.11 56.52 0.40 -5.75 16 10 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 11 H -0.28 -6.04 7.11 56.52 0.40 -5.64 16 12 N -0.71 -14.63 5.02 -56.05 -0.28 -14.91 16 13 C 0.56 12.04 7.74 -12.59 -0.10 11.94 16 14 O -0.52 -14.15 15.23 -14.77 -0.23 -14.38 16 15 C -0.27 -4.34 6.05 -102.72 -0.62 -4.96 16 16 C 0.15 1.43 10.73 -16.55 -0.18 1.25 16 17 N -0.57 -3.01 5.16 -12.71 -0.07 -3.08 16 18 H 0.43 0.18 8.88 -40.82 -0.36 -0.18 16 19 C 0.14 0.94 10.86 -17.04 -0.19 0.76 16 20 C -0.19 -2.40 6.33 -39.41 -0.25 -2.65 16 21 Cl -0.04 -0.45 28.62 -51.86 -1.48 -1.93 16 22 C 0.41 7.26 6.96 -34.66 -0.24 7.02 16 23 O -0.45 -10.32 15.97 -15.20 -0.24 -10.56 16 24 H 0.09 2.47 6.07 -51.93 -0.32 2.15 16 25 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 26 H 0.03 0.60 8.14 -51.93 -0.42 0.18 16 27 H 0.27 7.12 8.31 -40.82 -0.34 6.78 16 28 H 0.38 6.14 6.61 -40.82 -0.27 5.87 16 29 H 0.18 1.10 6.42 -52.49 -0.34 0.77 16 30 H 0.17 0.45 8.06 -52.49 -0.42 0.02 16 LS Contribution 282.67 15.07 4.26 4.26 Total: -1.00 -38.51 282.67 -6.72 -45.23 By element: Atomic # 1 Polarization: 2.76 SS G_CDS: -2.49 Total: 0.27 kcal Atomic # 6 Polarization: 5.91 SS G_CDS: -1.80 Total: 4.11 kcal Atomic # 7 Polarization: -42.52 SS G_CDS: 0.28 Total: -42.24 kcal Atomic # 8 Polarization: -24.47 SS G_CDS: -0.47 Total: -24.94 kcal Atomic # 14 Polarization: 20.25 SS G_CDS: -5.02 Total: 15.23 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.48 Total: -1.93 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -38.51 -6.72 -45.23 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001324461763.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.132 kcal (2) G-P(sol) polarization free energy of solvation -38.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.720 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.235 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds