Wall clock time and date at job start Mon Mar 30 2020 01:13:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46491 * 109.47033 * 125.13085 * 3 2 1 5 5 C 1.36986 * 119.99962 * 263.10698 * 4 3 2 6 6 H 1.08002 * 120.00008 * 179.97438 * 5 4 3 7 7 C 1.38976 * 120.00004 * 0.26941 * 5 4 3 8 8 N 1.31408 * 120.00424 * 143.13478 * 7 5 4 9 9 Si 1.86806 * 119.99553 * 323.12867 * 7 5 4 10 10 H 1.48499 * 109.46816 * 96.58981 * 9 7 5 11 11 H 1.48502 * 109.46964 * 216.58513 * 9 7 5 12 12 H 1.48494 * 109.47275 * 336.58871 * 9 7 5 13 13 C 1.34773 * 120.00258 * 83.11296 * 4 3 2 14 14 O 1.21633 * 120.00266 * 180.90304 * 13 4 3 15 15 C 1.47362 * 119.99818 * 0.89616 * 13 4 3 16 16 C 1.41318 * 126.41905 * 349.24330 * 15 13 4 17 17 N 1.30444 * 108.02271 * 179.85360 * 16 15 13 18 18 N 1.39936 * 108.91619 * 0.40699 * 17 16 15 19 19 C 1.46498 * 125.75155 * 179.69795 * 18 17 16 20 20 F 1.39897 * 109.47012 * 30.04713 * 19 18 17 21 21 F 1.39901 * 109.47028 * 150.04349 * 19 18 17 22 22 C 1.34285 * 108.49725 * 359.73861 * 18 17 16 23 23 H 1.08998 * 109.47001 * 5.12729 * 3 2 1 24 24 H 1.09003 * 109.46725 * 245.13119 * 3 2 1 25 25 H 0.96999 * 120.00421 * 179.97438 * 8 7 5 26 26 H 1.07998 * 125.98689 * 0.02562 * 16 15 13 27 27 H 1.08996 * 109.47282 * 270.04232 * 19 18 17 28 28 H 1.07997 * 126.30043 * 180.02562 * 22 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0960 0.7956 -1.1295 5 6 3.4588 0.1769 -2.2966 6 1 3.8181 0.7630 -3.1295 7 6 3.3587 -1.2046 -2.4109 8 7 2.9894 -1.7446 -3.5506 9 14 3.7494 -2.2938 -0.9444 10 1 2.4899 -2.6495 -0.2427 11 1 4.4217 -3.5322 -1.4129 12 1 4.6468 -1.5655 -0.0121 13 6 3.1881 2.1358 -1.0206 14 8 3.5776 2.7974 -1.9640 15 6 2.8166 2.7996 0.2416 16 6 2.1547 2.2047 1.3392 17 7 2.0086 3.1136 2.2634 18 7 2.5533 4.3183 1.8049 19 6 2.5815 5.5818 2.5459 20 9 2.6431 5.3163 3.9181 21 9 3.7055 6.3217 2.1633 22 6 3.0449 4.1213 0.5709 23 1 2.9718 -1.0227 -0.0918 24 1 2.9711 0.4330 0.9324 25 1 2.9198 -2.7087 -3.6305 26 1 1.8295 1.1768 1.4030 27 1 1.6791 6.1521 2.3262 28 1 3.5300 4.8602 -0.0495 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001331866547.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:13:00 Heat of formation + Delta-G solvation = 49.423229 kcal Electronic energy + Delta-G solvation = -20274.697940 eV Core-core repulsion = 16581.105974 eV Total energy + Delta-G solvation = -3693.591965 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.067 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -49.58103 -47.69522 -41.38894 -38.86376 -36.54297 -34.82662 -33.08873 -32.19580 -30.22674 -28.38713 -26.77954 -25.10694 -22.15651 -21.56973 -19.56702 -18.81249 -18.35940 -18.26707 -17.55342 -17.23259 -16.46742 -15.75778 -15.02922 -14.80274 -14.48184 -14.17211 -14.05140 -13.81043 -13.75014 -13.24810 -13.08439 -12.76880 -12.47236 -12.44454 -12.24117 -12.02767 -11.79059 -11.10602 -11.02219 -10.62571 -9.87097 -9.64257 -9.50356 -8.87381 -8.69646 -8.33982 -6.71433 -3.96947 1.43364 1.67860 2.25072 2.75950 2.86852 2.96845 3.02389 3.12568 3.20855 3.67830 3.85127 3.87080 4.13631 4.17949 4.39048 4.64078 4.77376 4.90583 5.07885 5.25408 5.40124 5.43861 5.71676 6.23680 6.51402 7.20838 7.37470 7.77580 7.91250 8.19101 8.71331 9.06262 9.49402 10.37963 Molecular weight = 270.07amu Principal moments of inertia in cm(-1) A = 0.030557 B = 0.005723 C = 0.005307 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 916.114962 B = 4891.715218 C = 5274.708151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.414 5.414 2 C 0.193 3.807 3 C 0.168 3.832 4 N -0.436 5.436 5 C -0.335 4.335 6 H 0.131 0.869 7 C 0.061 3.939 8 N -0.818 5.818 9 Si 0.846 3.154 10 H -0.270 1.270 11 H -0.279 1.279 12 H -0.255 1.255 13 C 0.527 3.473 14 O -0.562 6.562 15 C -0.243 4.243 16 C 0.055 3.945 17 N -0.276 5.276 18 N -0.435 5.435 19 C 0.513 3.487 20 F -0.173 7.173 21 F -0.180 7.180 22 C 0.122 3.878 23 H 0.098 0.902 24 H 0.128 0.872 25 H 0.279 0.721 26 H 0.203 0.797 27 H 0.157 0.843 28 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.511 9.163 12.529 15.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.092 5.092 2 C -0.126 4.126 3 C 0.040 3.960 4 N -0.155 5.155 5 C -0.460 4.460 6 H 0.148 0.852 7 C -0.148 4.148 8 N -0.451 5.451 9 Si 0.674 3.326 10 H -0.198 1.198 11 H -0.206 1.206 12 H -0.180 1.180 13 C 0.317 3.683 14 O -0.445 6.445 15 C -0.257 4.257 16 C -0.133 4.133 17 N -0.094 5.094 18 N -0.226 5.226 19 C 0.379 3.621 20 F -0.155 7.155 21 F -0.162 7.162 22 C -0.024 4.024 23 H 0.115 0.885 24 H 0.145 0.855 25 H 0.090 0.910 26 H 0.219 0.781 27 H 0.173 0.827 28 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges -1.401 9.748 13.128 16.411 hybrid contribution 1.093 -1.089 -0.005 1.543 sum -0.307 8.659 13.122 15.725 Atomic orbital electron populations 1.81088 1.12738 1.08048 1.07341 1.29720 0.95744 0.93469 0.93695 1.19921 0.81483 1.00089 0.94464 1.43483 1.55647 1.04482 1.11894 1.19232 1.45432 0.91233 0.90126 0.85165 1.25051 0.96024 0.96840 0.96878 1.69985 1.35336 1.13003 1.26775 0.87379 0.79749 0.81432 0.84016 1.19777 1.20582 1.18037 1.16566 0.84265 0.81277 0.86220 1.90668 1.51314 1.63028 1.39473 1.20723 1.12047 0.94195 0.98724 1.25214 0.97213 0.99754 0.91146 1.77244 1.20263 0.89115 1.22808 1.49672 1.48942 1.10204 1.13802 1.21267 0.88219 0.78810 0.73783 1.93121 1.96958 1.94015 1.31375 1.93139 1.56452 1.75629 1.90934 1.22829 0.95991 0.97750 0.85842 0.88491 0.85532 0.91019 0.78110 0.82693 0.78808 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -8.52 18.54 42.15 0.78 -7.74 15 2 C 0.19 3.78 12.87 -20.76 -0.27 3.51 15 3 C 0.17 3.17 4.37 -6.83 -0.03 3.14 15 4 N -0.44 -9.92 2.59 -119.17 -0.31 -10.22 15 5 C -0.34 -8.77 9.81 -14.98 -0.15 -8.92 15 6 H 0.13 3.81 7.38 -52.49 -0.39 3.42 15 7 C 0.06 1.55 5.31 -17.46 -0.09 1.46 15 8 N -0.82 -21.92 13.96 55.50 0.77 -21.15 15 9 Si 0.85 17.59 24.67 -169.99 -4.19 13.40 15 10 H -0.27 -5.31 7.00 56.52 0.40 -4.92 15 11 H -0.28 -5.85 7.11 56.52 0.40 -5.44 15 12 H -0.25 -4.85 6.95 56.52 0.39 -4.46 15 13 C 0.53 11.72 7.54 -12.55 -0.09 11.63 15 14 O -0.56 -14.28 16.49 5.25 0.09 -14.20 15 15 C -0.24 -4.35 5.94 -105.06 -0.62 -4.97 15 16 C 0.06 0.90 9.26 -16.97 -0.16 0.74 15 17 N -0.28 -4.30 12.32 30.87 0.38 -3.92 15 18 N -0.44 -5.85 3.94 -66.07 -0.26 -6.11 15 19 C 0.51 4.79 6.62 59.85 0.40 5.19 15 20 F -0.17 -1.90 17.35 2.25 0.04 -1.86 15 21 F -0.18 -1.72 17.00 2.25 0.04 -1.69 15 22 C 0.12 1.80 10.86 -16.53 -0.18 1.62 15 23 H 0.10 1.90 0.84 -51.93 -0.04 1.85 15 24 H 0.13 1.91 4.87 -51.93 -0.25 1.65 15 25 H 0.28 6.85 8.31 -40.82 -0.34 6.51 15 26 H 0.20 3.08 3.30 -52.49 -0.17 2.91 15 27 H 0.16 0.78 8.14 -51.93 -0.42 0.36 15 28 H 0.20 2.43 8.06 -52.49 -0.42 2.01 15 LS Contribution 261.41 15.07 3.94 3.94 Total: -1.00 -31.48 261.41 -0.77 -32.25 By element: Atomic # 1 Polarization: 4.75 SS G_CDS: -0.85 Total: 3.90 kcal Atomic # 6 Polarization: 14.59 SS G_CDS: -1.20 Total: 13.40 kcal Atomic # 7 Polarization: -50.51 SS G_CDS: 1.37 Total: -49.14 kcal Atomic # 8 Polarization: -14.28 SS G_CDS: 0.09 Total: -14.20 kcal Atomic # 9 Polarization: -3.63 SS G_CDS: 0.08 Total: -3.55 kcal Atomic # 14 Polarization: 17.59 SS G_CDS: -4.19 Total: 13.40 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -31.48 -0.77 -32.25 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001331866547.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.675 kcal (2) G-P(sol) polarization free energy of solvation -31.480 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.252 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds