Wall clock time and date at job start Mon Mar 30 2020 01:26:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09005 * 109.47344 * 2 1 4 4 C 1.50700 * 109.47344 * 119.99929 * 2 1 3 5 5 H 1.07997 * 120.00255 * 119.99941 * 4 2 1 6 6 C 1.37877 * 119.99844 * 300.00261 * 4 2 1 7 7 N 1.31515 * 120.00046 * 359.97438 * 6 4 2 8 8 Si 1.86803 * 120.00056 * 179.97438 * 6 4 2 9 9 H 1.48506 * 109.46931 * 359.97438 * 8 6 4 10 10 H 1.48492 * 109.47296 * 120.00012 * 8 6 4 11 11 H 1.48507 * 109.47111 * 240.00446 * 8 6 4 12 12 N 1.46497 * 109.47553 * 239.99896 * 2 1 3 13 13 C 1.38508 * 120.00084 * 84.99552 * 12 2 1 14 14 C 1.39894 * 120.49894 * 0.23922 * 13 12 2 15 15 C 1.39034 * 118.21644 * 180.27769 * 14 13 12 16 16 C 1.48446 * 120.50277 * 179.76597 * 15 14 13 17 17 N 1.34777 * 120.00140 * 179.72427 * 16 15 14 18 18 O 1.21480 * 119.99423 * 359.72102 * 16 15 14 19 19 N 1.33342 * 119.00090 * 359.48784 * 15 14 13 20 20 C 1.31664 * 120.91880 * 0.25375 * 19 15 14 21 21 Cl 1.73601 * 119.01393 * 179.97438 * 20 19 15 22 22 N 1.31997 * 121.97318 * 0.02562 * 20 19 15 23 23 H 1.09003 * 109.46847 * 60.00085 * 1 2 3 24 24 H 1.08999 * 109.46796 * 179.97438 * 1 2 3 25 25 H 1.08995 * 109.47141 * 299.99810 * 1 2 3 26 26 H 0.97002 * 120.00119 * 179.97438 * 7 6 4 27 27 H 0.97001 * 120.00328 * 265.00275 * 12 2 1 28 28 H 1.07999 * 120.89475 * 0.04352 * 14 13 12 29 29 H 0.96996 * 119.99887 * 359.97438 * 17 16 15 30 30 H 0.97000 * 119.99555 * 180.02562 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7104 1.2305 5 1 2.6533 -1.5885 1.1314 6 6 1.6993 -0.2393 2.4827 7 7 0.9435 0.8302 2.6034 8 14 2.3214 -1.1203 4.0080 9 1 3.1456 -2.2876 3.6038 10 1 3.1465 -0.1873 4.8165 11 1 1.1660 -1.5867 4.8161 12 7 2.0184 -0.6906 -1.1961 13 6 2.1507 0.0003 -2.3892 14 6 1.8256 1.3590 -2.4627 15 6 1.9707 2.0044 -3.6856 16 6 1.6355 3.4440 -3.8222 17 7 1.7853 4.0610 -5.0111 18 8 1.2262 4.0660 -2.8623 19 7 2.4208 1.3121 -4.7326 20 6 2.7211 0.0351 -4.6207 21 17 3.3025 -0.8186 -6.0160 22 7 2.5924 -0.6158 -3.4796 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 0.7088 1.1614 3.4844 27 1 2.2491 -1.6318 -1.1526 28 1 1.4678 1.8913 -1.5938 29 1 2.1124 3.5644 -5.7774 30 1 1.5666 5.0018 -5.1002 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001472690995.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:35 Heat of formation + Delta-G solvation = 2.899181 kcal Electronic energy + Delta-G solvation = -17958.437989 eV Core-core repulsion = 14814.625270 eV Total energy + Delta-G solvation = -3143.812719 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.062 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.90088 -39.01567 -36.99731 -36.33916 -34.04243 -33.31183 -32.45561 -30.69770 -28.64506 -25.62315 -25.06838 -23.72673 -21.32556 -20.50650 -18.51309 -18.13324 -16.93205 -16.35865 -15.69414 -15.44419 -15.23345 -15.00445 -14.62337 -14.33203 -13.90452 -13.59603 -12.76583 -12.57318 -11.78914 -11.42121 -11.37212 -11.20584 -11.00434 -10.81157 -10.67880 -10.45168 -10.40785 -10.32858 -9.73440 -9.50070 -9.29022 -9.18735 -8.68278 -7.59110 -6.31010 -4.41188 0.73763 1.35662 1.51864 2.89153 3.15820 3.24169 3.26741 3.30220 3.59603 4.02896 4.22166 4.41320 4.88055 5.01725 5.04889 5.59212 5.64954 6.16433 6.46130 6.65386 6.70018 6.76988 6.88500 7.08003 7.26991 7.48050 7.55712 7.70510 7.89037 8.15192 8.21779 8.32579 8.65942 9.26976 10.75153 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.020605 B = 0.005273 C = 0.004369 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1358.568896 B = 5309.178637 C = 6407.967515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.261 3.739 3 H 0.050 0.950 4 C -0.537 4.537 5 H 0.066 0.934 6 C 0.069 3.931 7 N -0.881 5.881 8 Si 0.906 3.094 9 H -0.272 1.272 10 H -0.281 1.281 11 H -0.281 1.281 12 N -0.664 5.664 13 C 0.459 3.541 14 C -0.217 4.217 15 C 0.152 3.848 16 C 0.583 3.417 17 N -0.835 5.835 18 O -0.521 6.521 19 N -0.551 5.551 20 C 0.408 3.592 21 Cl 0.010 6.990 22 N -0.573 5.573 23 H 0.015 0.985 24 H 0.035 0.965 25 H 0.098 0.902 26 H 0.267 0.733 27 H 0.405 0.595 28 H 0.167 0.833 29 H 0.412 0.588 30 H 0.404 0.596 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.940 1.547 -13.820 14.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C 0.160 3.840 3 H 0.068 0.932 4 C -0.576 4.576 5 H 0.084 0.916 6 C -0.135 4.135 7 N -0.518 5.518 8 Si 0.733 3.267 9 H -0.196 1.196 10 H -0.207 1.207 11 H -0.207 1.207 12 N -0.289 5.289 13 C 0.209 3.791 14 C -0.248 4.248 15 C 0.012 3.988 16 C 0.365 3.635 17 N -0.399 5.399 18 O -0.395 6.395 19 N -0.279 5.279 20 C 0.111 3.889 21 Cl 0.037 6.963 22 N -0.303 5.303 23 H 0.034 0.966 24 H 0.054 0.946 25 H 0.116 0.884 26 H 0.077 0.923 27 H 0.240 0.760 28 H 0.184 0.816 29 H 0.243 0.757 30 H 0.236 0.764 Dipole moment (debyes) X Y Z Total from point charges 1.864 1.527 -13.568 13.780 hybrid contribution 0.245 -0.436 0.944 1.069 sum 2.109 1.090 -12.624 12.845 Atomic orbital electron populations 1.22220 0.97649 1.00173 1.01308 1.19136 0.91484 0.93817 0.79559 0.93221 1.21121 1.33065 1.13729 0.89657 0.91563 1.24871 0.94534 0.94890 0.99179 1.69872 1.35405 1.22208 1.24331 0.86305 0.78690 0.79550 0.82106 1.19608 1.20702 1.20704 1.45773 1.63775 1.13326 1.06019 1.18548 0.86125 0.88143 0.86286 1.22432 1.07164 0.94751 1.00462 1.20861 0.94984 0.93910 0.89059 1.17745 0.77336 0.85144 0.83301 1.43586 1.69143 1.14815 1.12351 1.90877 1.44909 1.65346 1.38342 1.67596 1.20018 1.07680 1.32566 1.22155 0.92931 0.86131 0.87674 1.98401 1.85881 1.75456 1.36518 1.67240 1.24037 1.40474 0.98554 0.96576 0.94619 0.88359 0.92255 0.75950 0.81568 0.75742 0.76450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.46 9.24 37.16 0.34 -3.11 16 2 C 0.26 5.96 2.26 -69.08 -0.16 5.81 16 3 H 0.05 1.23 6.50 -51.93 -0.34 0.90 16 4 C -0.54 -13.34 8.73 -34.44 -0.30 -13.64 16 5 H 0.07 1.61 7.74 -52.49 -0.41 1.21 16 6 C 0.07 1.76 5.30 -17.82 -0.09 1.66 16 7 N -0.88 -23.20 11.32 55.43 0.63 -22.57 16 8 Si 0.91 19.81 29.54 -169.99 -5.02 14.79 16 9 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 10 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 11 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 12 N -0.66 -13.21 5.22 -54.89 -0.29 -13.50 16 13 C 0.46 8.76 7.69 -154.87 -1.19 7.56 16 14 C -0.22 -4.08 8.48 -38.67 -0.33 -4.41 16 15 C 0.15 2.55 6.79 -82.71 -0.56 1.99 16 16 C 0.58 9.00 8.10 -12.05 -0.10 8.90 16 17 N -0.83 -8.76 8.87 30.67 0.27 -8.49 16 18 O -0.52 -9.79 17.25 5.38 0.09 -9.70 16 19 N -0.55 -8.68 9.66 -8.30 -0.08 -8.76 16 20 C 0.41 6.71 8.17 -92.09 -0.75 5.95 16 21 Cl 0.01 0.13 29.26 -51.86 -1.52 -1.39 16 22 N -0.57 -10.36 10.42 -10.88 -0.11 -10.47 16 23 H 0.02 0.32 7.80 -51.93 -0.41 -0.08 16 24 H 0.03 0.77 8.14 -51.93 -0.42 0.34 16 25 H 0.10 2.41 6.07 -51.93 -0.32 2.10 16 26 H 0.27 6.71 8.31 -40.82 -0.34 6.37 16 27 H 0.40 7.62 8.66 -40.82 -0.35 7.27 16 28 H 0.17 3.35 6.02 -52.49 -0.32 3.04 16 29 H 0.41 3.69 8.21 -40.82 -0.34 3.36 16 30 H 0.40 3.29 8.93 -40.82 -0.36 2.93 16 LS Contribution 284.01 15.07 4.28 4.28 Total: -1.00 -27.38 284.01 -7.28 -34.65 By element: Atomic # 1 Polarization: 12.83 SS G_CDS: -2.39 Total: 10.44 kcal Atomic # 6 Polarization: 13.85 SS G_CDS: -3.14 Total: 10.71 kcal Atomic # 7 Polarization: -64.21 SS G_CDS: 0.42 Total: -63.79 kcal Atomic # 8 Polarization: -9.79 SS G_CDS: 0.09 Total: -9.70 kcal Atomic # 14 Polarization: 19.81 SS G_CDS: -5.02 Total: 14.79 kcal Atomic # 17 Polarization: 0.13 SS G_CDS: -1.52 Total: -1.39 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -27.38 -7.28 -34.65 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001472690995.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.552 kcal (2) G-P(sol) polarization free energy of solvation -27.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.275 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.653 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds