Wall clock time and date at job start Mon Mar 30 2020 02:12:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 N 1.46505 * 109.47366 * 257.29532 * 3 2 1 5 5 C 1.36920 * 120.00167 * 272.56996 * 4 3 2 6 6 H 1.07989 * 119.99958 * 187.89390 * 5 4 3 7 7 C 1.39009 * 119.99717 * 7.88599 * 5 4 3 8 8 N 1.31392 * 119.99920 * 24.63831 * 7 5 4 9 9 Si 1.86794 * 119.99635 * 204.63724 * 7 5 4 10 10 H 1.48499 * 109.47174 * 94.99289 * 9 7 5 11 11 H 1.48509 * 109.47183 * 214.99026 * 9 7 5 12 12 H 1.48495 * 109.47477 * 334.99393 * 9 7 5 13 13 C 1.34776 * 119.99748 * 92.56322 * 4 3 2 14 14 O 1.21624 * 119.99629 * 183.71649 * 13 4 3 15 15 C 1.47466 * 119.99994 * 3.71556 * 13 4 3 16 16 C 1.41806 * 120.08913 * 307.92356 * 15 13 4 17 17 C 1.35586 * 119.54689 * 180.02562 * 16 15 13 18 18 C 1.41175 * 119.65594 * 0.02562 * 17 16 15 19 19 N 1.32452 * 132.02230 * 179.97438 * 18 17 16 20 20 C 1.33577 * 109.23553 * 180.02562 * 19 18 17 21 21 C 1.34998 * 108.65538 * 359.95734 * 20 19 18 22 22 N 1.37015 * 107.13850 * 0.06277 * 21 20 19 23 23 C 1.35949 * 132.37758 * 179.97438 * 22 21 20 24 24 H 1.09002 * 109.47332 * 137.29469 * 3 2 1 25 25 H 1.09006 * 109.47156 * 17.29615 * 3 2 1 26 26 H 0.97000 * 119.99757 * 179.97438 * 8 7 5 27 27 H 1.07999 * 120.22863 * 0.02562 * 16 15 13 28 28 H 1.07995 * 120.17163 * 179.73018 * 17 16 15 29 29 H 1.08004 * 125.67444 * 180.02562 * 20 19 18 30 30 H 1.08009 * 126.43240 * 180.02562 * 21 20 19 31 31 H 1.07996 * 119.82657 * 359.94943 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 7 3.0962 0.3046 1.3474 5 6 3.2737 1.6061 1.7339 6 1 3.7518 1.8292 2.6761 7 6 2.8386 2.6403 0.9132 8 7 1.8688 2.4316 0.0516 9 14 3.6326 4.3267 1.0354 10 1 4.7059 4.4435 0.0158 11 1 2.6078 5.3748 0.7977 12 1 4.2155 4.5024 2.3899 13 6 3.3705 -0.6969 2.2066 14 8 3.7109 -0.4440 3.3465 15 6 3.2578 -2.0992 1.7646 16 6 2.0665 -2.5560 1.1456 17 6 1.9746 -3.8477 0.7440 18 6 3.0646 -4.7216 0.9470 19 7 3.2397 -6.0025 0.6589 20 6 4.4582 -6.3801 1.0551 21 6 5.0805 -5.3180 1.6094 22 7 4.2093 -4.2623 1.5480 23 6 4.3078 -2.9682 1.9528 24 1 2.9710 0.7560 -0.6970 25 1 2.9717 -0.9804 -0.3056 26 1 1.5650 3.1534 -0.5208 27 1 1.2381 -1.8796 0.9952 28 1 1.0705 -4.2074 0.2755 29 1 4.8765 -7.3701 0.9487 30 1 6.0778 -5.3033 2.0239 31 1 5.2149 -2.6206 2.4247 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000340668267.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:12:40 Heat of formation + Delta-G solvation = 110.093845 kcal Electronic energy + Delta-G solvation = -19822.848343 eV Core-core repulsion = 16686.116783 eV Total energy + Delta-G solvation = -3136.731560 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.66024 -39.36985 -36.66893 -36.01806 -34.47229 -33.58193 -32.08743 -30.19103 -28.64823 -27.65496 -25.52232 -23.68319 -22.77420 -21.64351 -19.94459 -18.23431 -17.92573 -16.90512 -16.44769 -16.03585 -15.73199 -15.42330 -14.59768 -14.41148 -14.24067 -13.94718 -13.46789 -13.35064 -13.17797 -12.45435 -12.23734 -11.78308 -11.63496 -11.49206 -11.40702 -11.27469 -10.97586 -10.63951 -10.51153 -10.43149 -10.07627 -9.45866 -9.02817 -8.62635 -8.35792 -7.75715 -6.75033 -4.15478 0.80542 1.26862 2.61114 2.80989 3.00918 3.11938 3.16644 3.36102 3.57519 3.71857 3.85100 3.97252 4.32485 4.43721 4.68280 4.74521 4.86837 4.98927 5.09624 5.30344 5.34639 5.51402 5.58644 5.89231 5.99061 6.09812 6.27281 6.37570 6.54088 6.66809 7.09483 7.26254 7.61900 7.91884 8.04786 8.61892 8.75721 8.94860 9.47126 10.29428 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.030629 B = 0.005567 C = 0.004983 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 913.942380 B = 5028.813017 C = 5618.103842 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.466 5.466 2 C 0.250 3.750 3 C 0.215 3.785 4 N -0.422 5.422 5 C -0.315 4.315 6 H 0.117 0.883 7 C 0.035 3.965 8 N -0.866 5.866 9 Si 0.932 3.068 10 H -0.274 1.274 11 H -0.283 1.283 12 H -0.266 1.266 13 C 0.487 3.513 14 O -0.568 6.568 15 C -0.116 4.116 16 C -0.081 4.081 17 C -0.088 4.088 18 C 0.229 3.771 19 N -0.501 5.501 20 C 0.027 3.973 21 C -0.104 4.104 22 N -0.359 5.359 23 C 0.092 3.908 24 H 0.130 0.870 25 H 0.086 0.914 26 H 0.279 0.721 27 H 0.145 0.855 28 H 0.152 0.848 29 H 0.178 0.822 30 H 0.181 0.819 31 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.671 -9.038 -2.376 11.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.147 5.147 2 C -0.068 4.068 3 C 0.088 3.912 4 N -0.140 5.140 5 C -0.442 4.442 6 H 0.135 0.865 7 C -0.170 4.170 8 N -0.504 5.504 9 Si 0.758 3.242 10 H -0.199 1.199 11 H -0.209 1.209 12 H -0.190 1.190 13 C 0.275 3.725 14 O -0.452 6.452 15 C -0.122 4.122 16 C -0.105 4.105 17 C -0.108 4.108 18 C -0.014 4.014 19 N -0.221 5.221 20 C -0.124 4.124 21 C -0.234 4.234 22 N -0.030 5.030 23 C -0.033 4.033 24 H 0.147 0.853 25 H 0.104 0.896 26 H 0.089 0.911 27 H 0.162 0.838 28 H 0.170 0.830 29 H 0.196 0.804 30 H 0.199 0.801 31 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 4.559 -9.285 -2.315 10.599 hybrid contribution 1.247 1.451 0.330 1.941 sum 5.805 -7.833 -1.985 9.950 Atomic orbital electron populations 1.80942 1.13255 1.12624 1.07880 1.28963 0.95143 0.89706 0.92970 1.18967 0.82100 1.01969 0.88150 1.43618 1.54523 1.06176 1.09667 1.19872 1.37624 0.79153 1.07518 0.86508 1.25340 0.94695 1.00716 0.96252 1.69820 1.21937 1.34987 1.23642 0.85799 0.78896 0.80181 0.79324 1.19917 1.20886 1.19013 1.17318 0.86573 0.82927 0.85685 1.90689 1.53046 1.83366 1.18084 1.19980 0.93951 0.96241 1.02060 1.21459 0.97600 0.95667 0.95780 1.20109 0.96770 0.91361 1.02557 1.21058 0.88602 0.91525 1.00240 1.70716 1.18438 1.07845 1.25122 1.22446 0.91092 0.99067 0.99781 1.22676 0.98787 0.86818 1.15153 1.42781 1.14034 1.08291 1.37874 1.21849 1.00942 0.80882 0.99639 0.85254 0.89602 0.91050 0.83786 0.83009 0.80443 0.80140 0.81101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.50 18.44 42.15 0.78 -9.72 16 2 C 0.25 5.23 10.54 -20.76 -0.22 5.01 16 3 C 0.22 4.09 4.76 -6.83 -0.03 4.06 16 4 N -0.42 -9.29 2.58 -119.14 -0.31 -9.60 16 5 C -0.32 -7.61 9.41 -14.99 -0.14 -7.75 16 6 H 0.12 2.99 7.31 -52.49 -0.38 2.60 16 7 C 0.04 0.81 4.92 -17.45 -0.09 0.72 16 8 N -0.87 -20.35 8.98 55.50 0.50 -19.85 16 9 Si 0.93 18.39 29.62 -169.99 -5.03 13.36 16 10 H -0.27 -5.25 7.11 56.52 0.40 -4.84 16 11 H -0.28 -5.70 7.11 56.52 0.40 -5.30 16 12 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 13 C 0.49 10.50 7.13 -12.50 -0.09 10.41 16 14 O -0.57 -14.16 16.65 5.26 0.09 -14.08 16 15 C -0.12 -2.03 4.74 -105.01 -0.50 -2.53 16 16 C -0.08 -1.32 7.69 -39.17 -0.30 -1.62 16 17 C -0.09 -1.32 10.08 -39.42 -0.40 -1.72 16 18 C 0.23 3.65 7.80 -155.92 -1.22 2.44 16 19 N -0.50 -7.93 11.31 -12.72 -0.14 -8.07 16 20 C 0.03 0.34 11.82 -17.94 -0.21 0.13 16 21 C -0.10 -1.26 11.75 -16.39 -0.19 -1.45 16 22 N -0.36 -5.30 2.93 -62.00 -0.18 -5.48 16 23 C 0.09 1.40 10.66 -15.96 -0.17 1.23 16 24 H 0.13 2.49 6.43 -51.93 -0.33 2.15 16 25 H 0.09 1.34 5.88 -51.93 -0.31 1.04 16 26 H 0.28 6.32 8.31 -40.82 -0.34 5.98 16 27 H 0.14 2.53 4.89 -52.49 -0.26 2.27 16 28 H 0.15 1.97 8.06 -52.49 -0.42 1.54 16 29 H 0.18 1.56 8.06 -52.48 -0.42 1.14 16 30 H 0.18 1.51 8.06 -52.48 -0.42 1.09 16 31 H 0.17 2.30 8.06 -52.49 -0.42 1.88 16 LS Contribution 278.21 15.07 4.19 4.19 Total: -1.00 -29.91 278.21 -5.77 -35.68 By element: Atomic # 1 Polarization: 6.74 SS G_CDS: -2.11 Total: 4.63 kcal Atomic # 6 Polarization: 12.48 SS G_CDS: -3.56 Total: 8.93 kcal Atomic # 7 Polarization: -53.36 SS G_CDS: 0.64 Total: -52.72 kcal Atomic # 8 Polarization: -14.16 SS G_CDS: 0.09 Total: -14.08 kcal Atomic # 14 Polarization: 18.39 SS G_CDS: -5.03 Total: 13.36 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -29.91 -5.77 -35.68 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000340668267.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.775 kcal (2) G-P(sol) polarization free energy of solvation -29.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.774 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.681 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds