Wall clock time and date at job start Mon Mar 30 2020 02:14:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46496 * 109.47336 * 222.27114 * 3 2 1 5 5 C 1.36828 * 119.99710 * 269.57606 * 4 3 2 6 6 H 1.07996 * 120.00043 * 194.33191 * 5 4 3 7 7 C 1.39065 * 119.99927 * 14.32789 * 5 4 3 8 8 N 1.31355 * 120.00160 * 12.06208 * 7 5 4 9 9 Si 1.86798 * 119.99724 * 192.06189 * 7 5 4 10 10 H 1.48497 * 109.47524 * 90.00287 * 9 7 5 11 11 H 1.48502 * 109.47272 * 209.99869 * 9 7 5 12 12 H 1.48500 * 109.47219 * 329.99904 * 9 7 5 13 13 C 1.34779 * 120.00327 * 89.56820 * 4 3 2 14 14 O 1.21640 * 119.99793 * 184.93656 * 13 4 3 15 15 C 1.47318 * 119.99633 * 4.94376 * 13 4 3 16 16 C 1.39112 * 120.29994 * 303.69693 * 15 13 4 17 17 C 1.38460 * 120.35485 * 180.02562 * 16 15 13 18 18 C 1.37858 * 120.80370 * 0.02562 * 17 16 15 19 19 C 1.39230 * 120.21016 * 359.95138 * 18 17 16 20 20 N 1.37221 * 133.64139 * 179.70177 * 19 18 17 21 21 H 0.97001 * 125.98172 * 0.02562 * 20 19 18 22 22 N 1.40029 * 108.02652 * 179.97438 * 20 19 18 23 23 C 1.30280 * 109.70012 * 0.34376 * 22 20 19 24 24 C 1.40663 * 119.79618 * 0.02562 * 19 18 17 25 25 H 1.08997 * 109.47361 * 102.26415 * 3 2 1 26 26 H 1.09006 * 109.47238 * 342.26832 * 3 2 1 27 27 H 0.97005 * 119.99854 * 179.97438 * 8 7 5 28 28 H 1.07997 * 119.81878 * 359.97438 * 16 15 13 29 29 H 1.08006 * 119.60236 * 179.97438 * 17 16 15 30 30 H 1.07997 * 119.89846 * 179.97438 * 18 17 16 31 31 H 1.08001 * 125.64964 * 179.81791 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0959 1.0229 0.9290 5 6 3.3317 2.2951 0.4840 6 1 3.9014 2.9828 1.0914 7 6 2.8378 2.7027 -0.7504 8 7 1.9547 1.9627 -1.3813 9 14 3.4302 4.3025 -1.5114 10 1 4.6232 4.0375 -2.3551 11 1 2.3500 4.8818 -2.3497 12 1 3.7884 5.2601 -0.4344 13 6 3.3125 0.7103 2.2221 14 8 3.6310 1.5783 3.0125 15 6 3.1635 -0.6827 2.6779 16 6 1.9662 -1.3622 2.4783 17 6 1.8248 -2.6712 2.9068 18 6 2.8627 -3.3238 3.5372 19 6 4.0737 -2.6709 3.7512 20 7 5.2579 -3.0401 4.3380 21 1 5.4525 -3.9036 4.7347 22 7 6.1365 -1.9524 4.2626 23 6 5.5469 -0.9517 3.6724 24 6 4.2361 -1.3411 3.3225 25 1 2.9713 0.2191 -1.0042 26 1 2.9718 -0.9781 0.3130 27 1 1.6099 2.2472 -2.2422 28 1 1.1424 -0.8658 1.9872 29 1 0.8897 -3.1872 2.7459 30 1 2.7363 -4.3447 3.8658 31 1 5.9883 0.0155 3.4819 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000355730194.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:14:04 Heat of formation + Delta-G solvation = 105.827959 kcal Electronic energy + Delta-G solvation = -19997.381100 eV Core-core repulsion = 16860.464557 eV Total energy + Delta-G solvation = -3136.916543 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.28907 -38.98956 -36.56634 -35.86110 -34.36894 -32.43181 -31.76824 -29.74755 -29.33746 -27.47561 -25.30031 -23.20202 -22.27325 -21.44974 -19.89135 -18.05700 -17.46692 -16.90569 -16.22516 -15.83115 -15.13260 -14.73549 -14.58636 -14.56762 -14.18726 -13.45973 -13.28651 -13.13765 -12.75021 -12.10285 -11.72735 -11.59061 -11.57192 -11.38706 -11.22556 -11.14706 -10.77290 -10.50514 -10.47956 -10.42023 -10.06536 -9.36223 -8.77704 -8.47332 -8.19522 -7.79776 -6.56803 -4.09347 0.88823 1.62666 2.70904 2.82859 3.05802 3.18022 3.22352 3.45415 3.69413 3.96178 4.02850 4.09184 4.56990 4.84664 4.85257 4.99501 5.07155 5.17051 5.35090 5.42765 5.51034 5.87283 5.92381 6.06115 6.13436 6.48427 6.57447 6.63627 6.66453 6.94283 7.36536 7.38587 7.69891 7.77735 8.19033 8.74587 8.88852 9.07869 9.61333 10.45610 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.024258 B = 0.006616 C = 0.005508 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1153.979221 B = 4231.114035 C = 5082.749921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.480 5.480 2 C 0.258 3.742 3 C 0.216 3.784 4 N -0.429 5.429 5 C -0.304 4.304 6 H 0.113 0.887 7 C 0.030 3.970 8 N -0.884 5.884 9 Si 0.938 3.062 10 H -0.274 1.274 11 H -0.283 1.283 12 H -0.268 1.268 13 C 0.483 3.517 14 O -0.565 6.565 15 C -0.011 4.011 16 C -0.145 4.145 17 C -0.063 4.063 18 C -0.145 4.145 19 C 0.125 3.875 20 N -0.514 5.514 21 H 0.438 0.562 22 N -0.262 5.262 23 C 0.095 3.905 24 C -0.145 4.145 25 H 0.137 0.863 26 H 0.082 0.918 27 H 0.276 0.724 28 H 0.131 0.869 29 H 0.131 0.869 30 H 0.124 0.876 31 H 0.196 0.804 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.092 -10.730 3.559 12.023 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.160 5.160 2 C -0.059 4.059 3 C 0.089 3.911 4 N -0.148 5.148 5 C -0.431 4.431 6 H 0.131 0.869 7 C -0.173 4.173 8 N -0.524 5.524 9 Si 0.764 3.236 10 H -0.200 1.200 11 H -0.209 1.209 12 H -0.192 1.192 13 C 0.272 3.728 14 O -0.448 6.448 15 C -0.018 4.018 16 C -0.165 4.165 17 C -0.084 4.084 18 C -0.168 4.168 19 C 0.008 3.992 20 N -0.229 5.229 21 H 0.282 0.718 22 N -0.077 5.077 23 C -0.101 4.101 24 C -0.154 4.154 25 H 0.155 0.845 26 H 0.100 0.900 27 H 0.087 0.913 28 H 0.149 0.851 29 H 0.149 0.851 30 H 0.142 0.858 31 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges 3.609 -10.644 4.313 12.038 hybrid contribution -0.216 0.579 -0.748 0.971 sum 3.393 -10.065 3.565 11.203 Atomic orbital electron populations 1.80919 1.13410 1.11207 1.10501 1.29080 0.95219 0.90555 0.91059 1.18980 0.81856 0.91293 0.98993 1.43561 1.55489 1.09964 1.05744 1.19867 1.32102 0.88750 1.02404 0.86924 1.25363 0.94956 0.99910 0.97060 1.69694 1.26925 1.39030 1.16716 0.85723 0.78222 0.80664 0.79013 1.19999 1.20902 1.19194 1.17844 0.85337 0.87129 0.82516 1.90680 1.52593 1.48902 1.52628 1.19751 0.92567 0.94050 0.95414 1.21368 0.97456 0.94924 1.02765 1.20866 0.97896 0.94166 0.95514 1.20024 0.90901 1.00207 1.05653 1.18789 0.88962 0.94584 0.96869 1.46007 1.08824 1.14290 1.53821 0.71782 1.76731 1.16320 0.94713 1.19894 1.23984 0.92042 0.98396 0.95667 1.18696 0.95583 0.93770 1.07347 0.84534 0.90017 0.91274 0.85098 0.85074 0.85779 0.78754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -11.05 18.36 42.15 0.77 -10.28 16 2 C 0.26 5.60 10.64 -20.76 -0.22 5.38 16 3 C 0.22 4.33 4.75 -6.83 -0.03 4.30 16 4 N -0.43 -9.89 2.58 -119.20 -0.31 -10.20 16 5 C -0.30 -7.59 9.42 -15.02 -0.14 -7.73 16 6 H 0.11 2.93 7.32 -52.49 -0.38 2.55 16 7 C 0.03 0.72 5.15 -17.45 -0.09 0.63 16 8 N -0.88 -21.35 8.62 55.50 0.48 -20.88 16 9 Si 0.94 19.21 29.57 -169.99 -5.03 14.18 16 10 H -0.27 -5.45 7.11 56.52 0.40 -5.05 16 11 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 12 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 13 C 0.48 11.01 6.96 -12.57 -0.09 10.92 16 14 O -0.56 -14.64 16.75 5.24 0.09 -14.56 16 15 C -0.01 -0.21 4.66 -104.68 -0.49 -0.70 16 16 C -0.14 -2.45 7.76 -39.18 -0.30 -2.75 16 17 C -0.06 -0.85 9.99 -39.64 -0.40 -1.24 16 18 C -0.15 -1.79 10.06 -39.35 -0.40 -2.19 16 19 C 0.12 1.81 7.32 -84.17 -0.62 1.19 16 20 N -0.51 -6.68 7.45 32.35 0.24 -6.44 16 21 H 0.44 4.00 8.96 -182.65 -1.64 2.37 16 22 N -0.26 -4.03 12.58 30.80 0.39 -3.64 16 23 C 0.09 1.57 11.84 -17.11 -0.20 1.37 16 24 C -0.15 -2.52 6.01 -106.67 -0.64 -3.16 16 25 H 0.14 2.80 6.26 -51.93 -0.33 2.47 16 26 H 0.08 1.38 6.17 -51.93 -0.32 1.06 16 27 H 0.28 6.48 8.31 -40.82 -0.34 6.15 16 28 H 0.13 2.43 5.10 -52.49 -0.27 2.16 16 29 H 0.13 1.39 8.06 -52.48 -0.42 0.96 16 30 H 0.12 1.11 8.06 -52.49 -0.42 0.69 16 31 H 0.20 3.06 8.06 -52.49 -0.42 2.64 16 LS Contribution 278.09 15.07 4.19 4.19 Total: -1.00 -30.15 278.09 -6.13 -36.28 By element: Atomic # 1 Polarization: 8.67 SS G_CDS: -3.34 Total: 5.34 kcal Atomic # 6 Polarization: 9.62 SS G_CDS: -3.62 Total: 6.01 kcal Atomic # 7 Polarization: -53.01 SS G_CDS: 1.57 Total: -51.44 kcal Atomic # 8 Polarization: -14.64 SS G_CDS: 0.09 Total: -14.56 kcal Atomic # 14 Polarization: 19.21 SS G_CDS: -5.03 Total: 14.18 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -30.15 -6.13 -36.28 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000355730194.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.106 kcal (2) G-P(sol) polarization free energy of solvation -30.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 111.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.278 kcal (6) G-S(sol) free energy of system = (1) + (5) 105.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds