Wall clock time and date at job start Mon Mar 30 2020 01:36:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46496 * 109.47318 * 33.38975 * 3 2 1 5 5 C 1.36770 * 119.99957 * 274.98364 * 4 3 2 6 6 H 1.08001 * 120.00069 * 188.17976 * 5 4 3 7 7 C 1.39125 * 119.99828 * 8.18346 * 5 4 3 8 8 N 1.31309 * 120.00116 * 14.70891 * 7 5 4 9 9 Si 1.86802 * 119.99684 * 194.70890 * 7 5 4 10 10 H 1.48500 * 109.46633 * 90.00169 * 9 7 5 11 11 H 1.48500 * 109.46941 * 209.99598 * 9 7 5 12 12 H 1.48492 * 109.47075 * 330.00042 * 9 7 5 13 13 C 1.34769 * 120.00075 * 94.98689 * 4 3 2 14 14 O 1.21600 * 120.00235 * 184.96588 * 13 4 3 15 15 C 1.47771 * 120.00324 * 4.97028 * 13 4 3 16 16 C 1.39830 * 119.96413 * 130.12771 * 15 13 4 17 17 C 1.37554 * 120.14732 * 179.72424 * 16 15 13 18 18 C 1.39795 * 120.06323 * 0.55496 * 17 16 15 19 19 C 1.43198 * 120.04015 * 179.74083 * 18 17 16 20 20 N 7.47822 * 106.55261 * 135.87797 * 2 1 3 21 21 C 1.40208 * 119.92006 * 359.47183 * 18 17 16 22 22 O 1.35728 * 120.07370 * 180.27284 * 21 18 17 23 23 C 1.38399 * 119.85372 * 0.24976 * 21 18 17 24 24 H 4.40638 * 5.51343 * 180.02562 * 4 1 2 25 25 H 1.09003 * 109.46930 * 273.38698 * 3 2 1 26 26 H 1.09001 * 109.46657 * 153.39257 * 3 2 1 27 27 H 0.97003 * 120.00526 * 180.02562 * 8 7 5 28 28 H 1.08000 * 119.92351 * 0.02566 * 16 15 13 29 29 H 1.08000 * 119.96765 * 180.27916 * 17 16 15 30 30 H 0.96703 * 114.00026 * 89.99718 * 22 21 18 31 31 H 1.08001 * 120.03153 * 179.97438 * 23 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.1523 -0.7601 5 6 3.2664 -2.3686 -0.1486 6 1 3.7486 -3.1843 -0.6668 7 6 2.7788 -2.5551 1.1411 8 7 1.9493 -1.6807 1.6622 9 14 3.3044 -4.0494 2.1312 10 1 4.5275 -3.7233 2.9077 11 1 2.2142 -4.4340 3.0633 12 1 3.5893 -5.1785 1.2098 13 6 3.4551 -1.0145 -2.0619 14 8 3.7743 -1.9887 -2.7160 15 6 3.4184 0.3204 -2.6946 16 6 4.5130 0.7707 -3.4391 17 6 4.4807 2.0103 -4.0344 18 6 3.3571 2.8289 -3.8869 19 6 3.3262 4.1216 -4.5022 20 7 3.3045 5.1458 -4.9905 21 6 2.2582 2.3804 -3.1405 22 8 1.1635 3.1704 -2.9999 23 6 2.2920 1.1302 -2.5478 24 1 -1.0498 -0.0002 -0.0003 25 1 3.0093 -0.0599 1.0259 26 1 3.0088 0.9197 -0.4603 27 1 1.6096 -1.8105 2.5615 28 1 5.3838 0.1417 -3.5511 29 1 5.3259 2.3534 -4.6126 30 1 0.4961 3.0439 -3.6882 31 1 1.4473 0.7820 -1.9719 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491023491.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:36:38 Heat of formation + Delta-G solvation = 62.120300 kcal Electronic energy + Delta-G solvation = -19605.402297 eV Core-core repulsion = 16434.297697 eV Total energy + Delta-G solvation = -3171.104600 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.079 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -40.18317 -38.59345 -36.67512 -36.20811 -35.36087 -32.47919 -31.48299 -31.02298 -29.84530 -26.67849 -25.57991 -23.72809 -22.59515 -20.08902 -19.09961 -18.12064 -17.71110 -16.77945 -16.47362 -15.95090 -15.12128 -14.83664 -14.30624 -14.29465 -14.00040 -13.70563 -13.59438 -12.95774 -12.89369 -12.67894 -12.32558 -12.17534 -11.85481 -11.55762 -11.45912 -11.12669 -10.75303 -10.61382 -10.45785 -9.57821 -9.40721 -8.97526 -8.86314 -8.69442 -8.53668 -8.15692 -6.49316 -4.01452 0.60598 1.29572 2.67485 2.80995 3.07817 3.15452 3.19812 3.54013 3.71031 3.79698 3.87922 3.98226 4.05079 4.17704 4.66368 4.88191 4.97064 5.26317 5.37512 5.44693 5.52369 5.66180 5.89812 6.12815 6.22566 6.27187 6.55217 6.68391 6.77784 6.99725 7.35279 7.46664 7.55823 7.78080 8.21529 8.76071 8.91297 9.11911 9.66336 10.43895 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.029448 B = 0.005532 C = 0.004887 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 950.612012 B = 5060.314887 C = 5728.425207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.265 4.265 2 C -0.098 4.098 3 C 0.221 3.779 4 N -0.419 5.419 5 C -0.306 4.306 6 H 0.112 0.888 7 C 0.031 3.969 8 N -0.858 5.858 9 Si 0.933 3.067 10 H -0.275 1.275 11 H -0.283 1.283 12 H -0.268 1.268 13 C 0.463 3.537 14 O -0.579 6.579 15 C -0.041 4.041 16 C -0.094 4.094 17 C -0.060 4.060 18 C -0.068 4.068 19 C 0.269 3.731 20 N -0.429 5.429 21 C 0.152 3.848 22 O -0.491 6.491 23 C -0.133 4.133 24 H 0.199 0.801 25 H 0.120 0.880 26 H 0.066 0.934 27 H 0.273 0.727 28 H 0.141 0.859 29 H 0.137 0.863 30 H 0.394 0.606 31 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.387 5.894 -4.093 7.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.284 4.284 2 C -0.100 4.100 3 C 0.099 3.901 4 N -0.134 5.134 5 C -0.433 4.433 6 H 0.130 0.870 7 C -0.174 4.174 8 N -0.496 5.496 9 Si 0.759 3.241 10 H -0.201 1.201 11 H -0.208 1.208 12 H -0.192 1.192 13 C 0.252 3.748 14 O -0.465 6.465 15 C -0.046 4.046 16 C -0.113 4.113 17 C -0.080 4.080 18 C -0.072 4.072 19 C -0.046 4.046 20 N -0.105 5.105 21 C 0.105 3.895 22 O -0.301 6.301 23 C -0.152 4.152 24 H 0.216 0.784 25 H 0.137 0.863 26 H 0.084 0.916 27 H 0.084 0.916 28 H 0.159 0.841 29 H 0.155 0.845 30 H 0.251 0.749 31 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.713 7.193 -4.431 8.478 hybrid contribution -0.555 -1.196 0.541 1.425 sum 0.158 5.996 -3.890 7.149 Atomic orbital electron populations 1.24244 0.95341 1.03911 1.04918 1.22802 0.94024 0.96916 0.96260 1.18684 0.84712 0.87198 0.99548 1.43710 1.52966 1.09420 1.07307 1.19871 1.36238 0.89861 0.97364 0.87032 1.25407 0.95002 0.99411 0.97604 1.69972 1.27090 1.35825 1.16690 0.85802 0.78264 0.80768 0.79240 1.20057 1.20833 1.19194 1.17749 0.87259 0.87437 0.82305 1.90660 1.54880 1.39034 1.61883 1.20434 0.93474 0.94742 0.95903 1.21141 0.98544 0.95150 0.96468 1.20949 0.96096 0.93037 0.97958 1.16432 0.98089 0.89387 1.03333 1.25459 0.93488 0.92626 0.93025 1.81149 1.07834 1.11318 1.10207 1.18211 0.87007 0.89324 0.94981 1.84782 1.29378 1.61999 1.53958 1.22047 1.00372 0.92123 1.00658 0.78390 0.86264 0.91600 0.91565 0.84071 0.84478 0.74905 0.82947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.27 -5.18 19.05 29.55 0.56 -4.62 16 2 C -0.10 -2.07 8.70 -37.12 -0.32 -2.39 16 3 C 0.22 4.64 4.76 -6.83 -0.03 4.61 16 4 N -0.42 -9.86 2.59 -119.05 -0.31 -10.16 16 5 C -0.31 -7.81 9.46 -15.02 -0.14 -7.96 16 6 H 0.11 2.99 7.25 -52.49 -0.38 2.61 16 7 C 0.03 0.73 5.17 -17.45 -0.09 0.64 16 8 N -0.86 -20.66 8.37 55.50 0.46 -20.19 16 9 Si 0.93 19.18 29.58 -169.99 -5.03 14.15 16 10 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 11 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 12 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 13 C 0.46 10.49 7.16 -12.37 -0.09 10.40 16 14 O -0.58 -15.03 16.64 5.28 0.09 -14.94 16 15 C -0.04 -0.72 4.90 -104.93 -0.51 -1.23 16 16 C -0.09 -1.35 9.70 -39.24 -0.38 -1.73 16 17 C -0.06 -0.71 9.73 -39.25 -0.38 -1.09 16 18 C -0.07 -0.88 5.75 -106.65 -0.61 -1.49 16 19 C 0.27 3.66 14.85 -22.51 -0.33 3.33 16 20 N -0.43 -6.52 18.53 41.79 0.77 -5.75 16 21 C 0.15 2.10 6.70 -38.78 -0.26 1.84 16 22 O -0.49 -6.13 12.92 -18.89 -0.24 -6.37 16 23 C -0.13 -2.13 7.49 -39.05 -0.29 -2.42 16 24 H 0.20 3.15 7.80 -54.10 -0.42 2.73 16 25 H 0.12 2.65 6.29 -51.93 -0.33 2.32 16 26 H 0.07 1.21 5.53 -51.93 -0.29 0.93 16 27 H 0.27 6.32 8.31 -40.82 -0.34 5.98 16 28 H 0.14 1.92 8.06 -52.49 -0.42 1.50 16 29 H 0.14 1.23 8.06 -52.49 -0.42 0.81 16 30 H 0.39 3.07 9.06 45.56 0.41 3.49 16 31 H 0.15 2.65 4.71 -52.49 -0.25 2.41 16 LS Contribution 288.43 15.07 4.35 4.35 Total: -1.00 -29.97 288.43 -4.03 -33.99 By element: Atomic # 1 Polarization: 8.27 SS G_CDS: -1.23 Total: 7.04 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -2.89 Total: -2.12 kcal Atomic # 7 Polarization: -37.03 SS G_CDS: 0.93 Total: -36.10 kcal Atomic # 8 Polarization: -21.16 SS G_CDS: -0.16 Total: -21.32 kcal Atomic # 14 Polarization: 19.18 SS G_CDS: -5.03 Total: 14.15 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -29.97 -4.03 -33.99 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491023491.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.115 kcal (2) G-P(sol) polarization free energy of solvation -29.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.995 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds