Wall clock time and date at job start Mon Mar 30 2020 02:08:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42901 * 114.00202 * 2 1 4 4 C 1.53001 * 109.46897 * 179.97438 * 3 2 1 5 5 C 1.50701 * 109.46888 * 179.97438 * 4 3 2 6 6 C 1.38281 * 119.94256 * 90.00245 * 5 4 3 7 7 C 1.38149 * 120.07817 * 180.23535 * 6 5 4 8 8 C 1.38708 * 119.95752 * 359.48582 * 7 6 5 9 9 O 1.35922 * 120.06401 * 180.25491 * 8 7 6 10 10 C 1.42898 * 116.99623 * 0.25550 * 9 8 7 11 11 C 1.50709 * 109.47218 * 179.97438 * 10 9 8 12 12 H 1.07994 * 119.99579 * 0.02562 * 11 10 9 13 13 C 1.37872 * 119.99932 * 179.97438 * 11 10 9 14 14 N 1.31511 * 120.00419 * 0.02562 * 13 11 10 15 15 Si 1.86800 * 119.99750 * 180.02562 * 13 11 10 16 16 H 1.48501 * 109.47201 * 59.99757 * 15 13 11 17 17 H 1.48501 * 109.47031 * 180.02562 * 15 13 11 18 18 H 1.48501 * 109.47355 * 300.00179 * 15 13 11 19 19 C 1.38822 * 119.87756 * 0.51083 * 8 7 6 20 20 Cl 1.73602 * 120.03534 * 179.72208 * 19 8 7 21 21 C 1.38248 * 119.92380 * 359.74669 * 19 8 7 22 22 H 1.09003 * 109.47290 * 300.00659 * 1 2 3 23 23 H 1.09003 * 109.47212 * 59.99760 * 1 2 3 24 24 H 1.08993 * 109.47740 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47114 * 60.00066 * 3 2 1 26 26 H 1.08999 * 109.47167 * 299.99814 * 3 2 1 27 27 H 1.08996 * 109.47303 * 60.00474 * 4 3 2 28 28 H 1.09000 * 109.47365 * 299.99448 * 4 3 2 29 29 H 1.08002 * 119.95700 * 359.94980 * 6 5 4 30 30 H 1.07997 * 120.02220 * 179.72850 * 7 6 5 31 31 H 1.08997 * 109.47513 * 299.99894 * 10 9 8 32 32 H 1.09009 * 109.47472 * 60.00199 * 10 9 8 33 33 H 0.96997 * 120.00129 * 180.02562 * 14 13 11 34 34 H 1.08003 * 119.97713 * 180.02562 * 21 19 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5355 1.1845 0.0006 5 6 4.1485 2.5612 0.0000 6 6 4.4288 3.1925 1.1980 7 6 4.9863 4.4565 1.2006 8 6 5.2749 5.0888 0.0003 9 8 5.8282 6.3303 0.0004 10 6 6.0912 6.9230 1.2738 11 6 6.7002 8.2875 1.0766 12 1 6.8689 8.6643 0.0787 13 6 7.0408 9.0549 2.1702 14 7 6.8348 8.5962 3.3853 15 14 7.7948 10.7464 1.9257 16 1 6.8506 11.6041 1.1655 17 1 8.0683 11.3623 3.2490 18 1 9.0656 10.6171 1.1683 19 6 4.9928 4.4534 -1.2013 20 17 5.3457 5.2439 -2.7061 21 6 4.4300 3.1907 -1.1983 22 1 -0.3634 0.5139 0.8899 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 1.6886 1.8464 0.8900 26 1 1.6887 1.8464 -0.8900 27 1 3.8574 0.6435 -0.8891 28 1 3.8567 0.6438 0.8909 29 1 4.2074 2.6986 2.1326 30 1 5.2008 4.9504 2.1368 31 1 5.1587 7.0179 1.8301 32 1 6.7846 6.2934 1.8315 33 1 7.0741 9.1363 4.1547 34 1 4.2105 2.6954 -2.1326 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000601962931.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:08:11 Heat of formation + Delta-G solvation = -83.073452 kcal Electronic energy + Delta-G solvation = -17608.789129 eV Core-core repulsion = 14532.495949 eV Total energy + Delta-G solvation = -3076.293180 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.73096 -38.15735 -37.03211 -36.02983 -33.13089 -32.49316 -30.57392 -28.71953 -27.48064 -26.15260 -23.75151 -23.10129 -21.90294 -20.61478 -17.63056 -16.71393 -16.65252 -16.17625 -15.44815 -15.39879 -15.06683 -14.79932 -14.59531 -13.98510 -13.65146 -13.29671 -12.88639 -12.80798 -12.20280 -11.98587 -11.69149 -11.42140 -11.25665 -11.13346 -11.06347 -10.87863 -10.84644 -10.45818 -10.20795 -10.17122 -9.84480 -9.36053 -8.63118 -8.60480 -7.56209 -6.28753 -4.32455 1.43024 1.60816 2.57454 3.24514 3.27349 3.30766 3.54622 3.94605 4.03957 4.40414 4.85856 4.95245 4.98650 5.08748 5.11357 5.21619 5.25397 5.30651 5.37546 5.43550 5.51337 5.65852 5.87731 5.95054 6.07057 6.34167 6.51157 6.70253 6.78995 6.95722 6.99631 7.06043 7.62894 7.88790 8.32505 8.78696 9.32850 10.82453 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.026051 B = 0.003889 C = 0.003501 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1074.540683 B = 7197.828405 C = 7995.223999 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.395 6.395 3 C 0.064 3.936 4 C -0.065 4.065 5 C -0.138 4.138 6 C -0.067 4.067 7 C -0.201 4.201 8 C 0.165 3.835 9 O -0.301 6.301 10 C 0.192 3.808 11 C -0.524 4.524 12 H 0.071 0.929 13 C 0.061 3.939 14 N -0.895 5.895 15 Si 0.914 3.086 16 H -0.273 1.273 17 H -0.284 1.284 18 H -0.273 1.273 19 C -0.084 4.084 20 Cl -0.067 7.067 21 C -0.068 4.068 22 H 0.041 0.959 23 H 0.040 0.960 24 H 0.084 0.916 25 H 0.052 0.948 26 H 0.051 0.949 27 H 0.077 0.923 28 H 0.079 0.921 29 H 0.125 0.875 30 H 0.143 0.857 31 H 0.023 0.977 32 H 0.024 0.976 33 H 0.268 0.732 34 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.152 -14.202 -5.723 17.838 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.314 6.314 3 C -0.013 4.013 4 C -0.102 4.102 5 C -0.139 4.139 6 C -0.085 4.085 7 C -0.220 4.220 8 C 0.115 3.885 9 O -0.213 6.213 10 C 0.119 3.881 11 C -0.562 4.562 12 H 0.089 0.911 13 C -0.141 4.141 14 N -0.533 5.533 15 Si 0.740 3.260 16 H -0.198 1.198 17 H -0.210 1.210 18 H -0.198 1.198 19 C -0.111 4.111 20 Cl -0.038 7.038 21 C -0.087 4.087 22 H 0.059 0.941 23 H 0.059 0.941 24 H 0.102 0.898 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.096 0.904 28 H 0.097 0.903 29 H 0.143 0.857 30 H 0.161 0.839 31 H 0.041 0.959 32 H 0.041 0.959 33 H 0.078 0.922 34 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -8.917 -14.086 -5.809 17.654 hybrid contribution 0.172 1.202 0.195 1.230 sum -8.745 -12.883 -5.615 16.553 Atomic orbital electron populations 1.22720 0.81116 1.02549 1.00069 1.87840 1.19649 1.28467 1.95485 1.22614 0.93768 0.84181 1.00693 1.20276 0.92503 0.93537 1.03883 1.19289 1.05275 0.96753 0.92593 1.20892 0.96228 0.93916 0.97456 1.21437 1.05666 0.96992 0.97910 1.19008 0.90937 0.86669 0.91911 1.86231 1.73114 1.24779 1.37204 1.20727 0.96256 0.93326 0.77771 1.20919 1.41846 0.99349 0.94093 0.91058 1.24920 0.95490 0.99113 0.94577 1.69929 1.47246 1.38244 0.97892 0.86294 0.79752 0.82499 0.77420 1.19811 1.20973 1.19805 1.20151 1.09943 0.95318 0.85690 1.98335 1.93931 1.80598 1.30949 1.20625 0.97586 0.92185 0.98323 0.94065 0.94105 0.89765 0.93013 0.93069 0.90423 0.90283 0.85690 0.83931 0.95895 0.95871 0.92229 0.85107 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.25 11.01 101.05 1.11 1.37 16 2 O -0.40 -4.35 10.70 -35.23 -0.38 -4.73 16 3 C 0.06 0.67 5.92 37.16 0.22 0.89 16 4 C -0.06 -0.70 5.71 -27.88 -0.16 -0.86 16 5 C -0.14 -1.84 5.13 -104.60 -0.54 -2.37 16 6 C -0.07 -0.96 9.69 -39.60 -0.38 -1.34 16 7 C -0.20 -3.59 9.04 -39.44 -0.36 -3.95 16 8 C 0.16 3.30 6.68 -39.19 -0.26 3.04 16 9 O -0.30 -7.20 9.58 -19.49 -0.19 -7.39 16 10 C 0.19 4.98 4.49 36.01 0.16 5.14 16 11 C -0.52 -14.81 9.43 -34.44 -0.32 -15.14 16 12 H 0.07 2.01 7.81 -52.49 -0.41 1.60 16 13 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 14 N -0.90 -25.53 13.29 55.43 0.74 -24.80 16 15 Si 0.91 21.18 29.54 -169.99 -5.02 16.15 16 16 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 17 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 18 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 19 C -0.08 -1.47 6.33 -39.36 -0.25 -1.72 16 20 Cl -0.07 -1.15 28.50 -51.86 -1.48 -2.63 16 21 C -0.07 -0.98 9.48 -39.57 -0.38 -1.35 16 22 H 0.04 0.30 8.14 -51.93 -0.42 -0.13 16 23 H 0.04 0.29 8.14 -51.93 -0.42 -0.13 16 24 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 25 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 26 H 0.05 0.52 8.14 -51.93 -0.42 0.10 16 27 H 0.08 0.79 8.08 -51.93 -0.42 0.37 16 28 H 0.08 0.81 8.08 -51.93 -0.42 0.39 16 29 H 0.13 1.48 8.06 -52.49 -0.42 1.06 16 30 H 0.14 2.66 6.30 -52.49 -0.33 2.33 16 31 H 0.02 0.61 7.65 -51.93 -0.40 0.22 16 32 H 0.02 0.62 7.67 -51.92 -0.40 0.22 16 33 H 0.27 7.18 8.31 -40.82 -0.34 6.85 16 34 H 0.13 1.56 8.06 -52.48 -0.42 1.13 16 LS Contribution 312.06 15.07 4.70 4.70 Total: -1.00 -29.50 312.06 -7.34 -36.84 By element: Atomic # 1 Polarization: 1.00 SS G_CDS: -4.47 Total: -3.47 kcal Atomic # 6 Polarization: -13.44 SS G_CDS: -1.25 Total: -14.69 kcal Atomic # 7 Polarization: -25.53 SS G_CDS: 0.74 Total: -24.80 kcal Atomic # 8 Polarization: -11.55 SS G_CDS: -0.56 Total: -12.12 kcal Atomic # 14 Polarization: 21.18 SS G_CDS: -5.02 Total: 16.15 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.48 Total: -2.63 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -29.50 -7.34 -36.84 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000601962931.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.230 kcal (2) G-P(sol) polarization free energy of solvation -29.499 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.843 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.073 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds