Wall clock time and date at job start Mon Mar 30 2020 01:00:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35998 * 116.99733 * 2 1 4 4 C 1.38559 * 120.07396 * 359.71950 * 3 2 1 5 5 C 1.38247 * 119.99680 * 179.74143 * 4 3 2 6 6 C 1.50699 * 119.92486 * 180.25472 * 5 4 3 7 7 C 1.38247 * 120.14582 * 0.51856 * 5 4 3 8 8 C 1.38244 * 120.14821 * 359.75690 * 7 5 4 9 9 C 1.38559 * 119.99444 * 359.97438 * 8 7 5 10 10 O 1.36002 * 120.06693 * 179.97438 * 9 8 7 11 11 C 1.42900 * 117.00255 * 356.73459 * 10 9 8 12 12 H 1.09004 * 109.46802 * 26.84640 * 11 10 9 13 13 C 1.50700 * 109.47058 * 146.84527 * 11 10 9 14 14 H 1.08003 * 120.00381 * 0.02562 * 13 11 10 15 15 C 1.37883 * 119.99972 * 179.97438 * 13 11 10 16 16 N 1.31521 * 119.99555 * 0.02562 * 15 13 11 17 17 Si 1.86793 * 119.99967 * 180.02562 * 15 13 11 18 18 H 1.48497 * 109.47074 * 60.00332 * 17 15 13 19 19 H 1.48508 * 109.46850 * 180.02562 * 17 15 13 20 20 H 1.48501 * 109.47220 * 299.99900 * 17 15 13 21 21 C 1.52992 * 109.46918 * 266.84761 * 11 10 9 22 22 Cl 1.80301 * 109.47485 * 64.99818 * 21 11 10 23 23 H 1.09005 * 109.47452 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.46839 * 60.00288 * 1 2 3 25 25 H 1.08999 * 109.47397 * 300.00378 * 1 2 3 26 26 H 1.08000 * 120.00479 * 359.97438 * 4 3 2 27 27 H 1.08995 * 109.47670 * 270.25807 * 6 5 4 28 28 H 1.08999 * 109.47381 * 30.26341 * 6 5 4 29 29 H 1.09004 * 109.47090 * 150.25702 * 6 5 4 30 30 H 1.08006 * 119.92400 * 179.74553 * 7 5 4 31 31 H 1.08005 * 119.99889 * 179.97438 * 8 7 5 32 32 H 0.96993 * 119.99455 * 179.97438 * 16 15 13 33 33 H 1.09001 * 109.47518 * 185.00232 * 21 11 10 34 34 H 1.09008 * 109.47117 * 304.99487 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 1.2932 2.3748 -0.0059 5 6 1.9224 3.6057 -0.0005 6 6 1.1016 4.8696 -0.0010 7 6 3.3028 3.6799 0.0000 8 6 4.0602 2.5234 0.0001 9 6 3.4358 1.2864 0.0003 10 8 4.1795 0.1477 -0.0001 11 6 5.5985 0.2996 -0.0733 12 1 5.8829 1.2640 0.3479 13 6 6.2629 -0.8050 0.7074 14 1 5.6616 -1.5490 1.2089 15 6 7.6384 -0.8666 0.7806 16 7 8.3705 0.0390 0.1694 17 14 8.4618 -2.2363 1.7476 18 1 8.0740 -3.5498 1.1737 19 1 9.9365 -2.0783 1.6717 20 1 8.0297 -2.1691 3.1668 21 6 6.0441 0.2302 -1.5352 22 17 5.3667 1.6366 -2.4375 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 0.5139 0.8899 26 1 0.2146 2.3197 -0.0109 27 1 0.9040 5.1742 -1.0288 28 1 0.1571 4.6897 0.5125 29 1 1.6499 5.6592 0.5129 30 1 3.7907 4.6435 0.0001 31 1 5.1386 2.5841 0.0000 32 1 9.3381 -0.0041 0.2212 33 1 7.1327 0.2568 -1.5850 34 1 5.6826 -0.6962 -1.9817 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001225262255.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:00:08 Heat of formation + Delta-G solvation = -66.389965 kcal Electronic energy + Delta-G solvation = -18798.849503 eV Core-core repulsion = 15723.279773 eV Total energy + Delta-G solvation = -3075.569730 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.94946 -37.89226 -36.69094 -34.78799 -33.45093 -31.41188 -29.92832 -29.13058 -27.42053 -25.61773 -25.22171 -22.62008 -21.28668 -20.16224 -17.84734 -16.81123 -16.50987 -15.75305 -15.44095 -14.85262 -14.34153 -14.05412 -13.83738 -13.67644 -13.32514 -13.15273 -12.73243 -12.24729 -12.05148 -11.84428 -11.62001 -11.43060 -11.16609 -11.01670 -10.82519 -10.73402 -10.61059 -10.46927 -10.17877 -9.59485 -9.35876 -9.09712 -8.62930 -8.03641 -6.98539 -6.39652 -4.46476 1.85763 1.99570 3.17444 3.22801 3.25854 3.45295 3.71334 4.07472 4.26206 4.45533 4.96512 5.09602 5.31160 5.31752 5.35326 5.46954 5.64387 5.66171 5.76627 5.90218 5.98525 6.01928 6.23222 6.33278 6.34554 6.63686 6.81801 6.88054 7.05935 7.15665 7.30981 7.57005 7.75846 7.82533 8.43326 8.75170 9.21054 10.67545 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.021177 B = 0.006205 C = 0.005565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1321.883393 B = 4511.172738 C = 5029.851563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.305 6.305 3 C 0.081 3.919 4 C -0.178 4.178 5 C -0.111 4.111 6 C -0.102 4.102 7 C -0.116 4.116 8 C -0.157 4.157 9 C 0.130 3.870 10 O -0.301 6.301 11 C 0.204 3.796 12 H 0.050 0.950 13 C -0.519 4.519 14 H 0.076 0.924 15 C 0.063 3.937 16 N -0.891 5.891 17 Si 0.916 3.084 18 H -0.272 1.272 19 H -0.284 1.284 20 H -0.272 1.272 21 C -0.035 4.035 22 Cl -0.242 7.242 23 H 0.093 0.907 24 H 0.048 0.952 25 H 0.048 0.952 26 H 0.123 0.877 27 H 0.062 0.938 28 H 0.058 0.942 29 H 0.061 0.939 30 H 0.117 0.883 31 H 0.144 0.856 32 H 0.272 0.728 33 H 0.133 0.867 34 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.830 5.034 -0.964 11.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.218 6.218 3 C 0.036 3.964 4 C -0.197 4.197 5 C -0.111 4.111 6 C -0.159 4.159 7 C -0.134 4.134 8 C -0.176 4.176 9 C 0.083 3.917 10 O -0.214 6.214 11 C 0.149 3.851 12 H 0.068 0.932 13 C -0.557 4.557 14 H 0.094 0.906 15 C -0.140 4.140 16 N -0.528 5.528 17 Si 0.743 3.257 18 H -0.197 1.197 19 H -0.209 1.209 20 H -0.197 1.197 21 C -0.097 4.097 22 Cl -0.216 7.216 23 H 0.112 0.888 24 H 0.067 0.933 25 H 0.067 0.933 26 H 0.141 0.859 27 H 0.080 0.920 28 H 0.077 0.923 29 H 0.080 0.920 30 H 0.135 0.865 31 H 0.161 0.839 32 H 0.082 0.918 33 H 0.151 0.849 34 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -10.639 4.779 -1.056 11.711 hybrid contribution 0.433 -0.323 0.270 0.603 sum -10.206 4.456 -0.786 11.164 Atomic orbital electron populations 1.22940 0.79876 1.03206 1.00556 1.86212 1.19879 1.26317 1.89443 1.18250 0.89490 0.84666 1.03970 1.20699 0.98894 0.91240 1.08865 1.19388 0.93823 0.94068 1.03856 1.20632 0.98831 0.94857 1.01545 1.20644 0.92745 0.97718 1.02340 1.21320 1.01407 0.90976 1.03905 1.18364 0.88229 0.87386 0.97769 1.86229 1.21450 1.27163 1.86574 1.20513 0.73603 0.99938 0.91007 0.93237 1.21004 0.91188 1.11979 1.31514 0.90596 1.24978 0.96773 0.96712 0.95503 1.69792 1.06539 1.34089 1.42387 0.86233 0.77836 0.81324 0.80316 1.19742 1.20888 1.19743 1.25766 1.04039 0.86249 0.93666 1.98640 1.88882 1.53645 1.80431 0.88820 0.93329 0.93317 0.85875 0.91961 0.92343 0.91974 0.86515 0.83873 0.91812 0.84927 0.90778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.38 9.81 101.05 0.99 1.37 16 2 O -0.30 -5.75 10.28 -34.24 -0.35 -6.10 16 3 C 0.08 1.59 6.70 -39.12 -0.26 1.32 16 4 C -0.18 -2.89 8.69 -39.46 -0.34 -3.23 16 5 C -0.11 -1.73 5.88 -104.62 -0.62 -2.35 16 6 C -0.10 -1.18 10.01 36.01 0.36 -0.82 16 7 C -0.12 -1.99 9.69 -39.58 -0.38 -2.37 16 8 C -0.16 -3.18 7.05 -39.46 -0.28 -3.46 16 9 C 0.13 2.84 5.98 -39.12 -0.23 2.61 16 10 O -0.30 -7.43 9.51 -34.25 -0.33 -7.76 16 11 C 0.20 5.12 2.19 -27.89 -0.06 5.06 16 12 H 0.05 1.29 5.40 -51.93 -0.28 1.01 16 13 C -0.52 -13.86 8.89 -34.44 -0.31 -14.16 16 14 H 0.08 2.05 7.81 -52.48 -0.41 1.64 16 15 C 0.06 1.63 5.29 -17.81 -0.09 1.54 16 16 N -0.89 -23.37 11.29 55.43 0.63 -22.74 16 17 Si 0.92 20.19 29.54 -169.99 -5.02 15.16 16 18 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 19 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 20 H -0.27 -5.99 7.11 56.52 0.40 -5.58 16 21 C -0.03 -0.81 6.17 37.15 0.23 -0.58 16 22 Cl -0.24 -5.14 25.62 -51.86 -1.33 -6.47 16 23 H 0.09 0.97 8.14 -51.93 -0.42 0.55 16 24 H 0.05 0.54 7.65 -51.93 -0.40 0.15 16 25 H 0.05 0.54 7.68 -51.93 -0.40 0.14 16 26 H 0.12 1.62 6.30 -52.49 -0.33 1.29 16 27 H 0.06 0.66 8.14 -51.93 -0.42 0.24 16 28 H 0.06 0.59 8.09 -51.93 -0.42 0.17 16 29 H 0.06 0.65 8.08 -51.93 -0.42 0.23 16 30 H 0.12 1.72 8.06 -52.48 -0.42 1.30 16 31 H 0.14 3.06 5.10 -52.48 -0.27 2.79 16 32 H 0.27 6.78 8.31 -40.82 -0.34 6.44 16 33 H 0.13 3.29 5.95 -51.93 -0.31 2.98 16 34 H 0.07 1.72 8.14 -51.92 -0.42 1.29 16 LS Contribution 296.77 15.07 4.47 4.47 Total: -1.00 -28.14 296.77 -6.98 -35.13 By element: Atomic # 1 Polarization: 7.43 SS G_CDS: -4.06 Total: 3.37 kcal Atomic # 6 Polarization: -14.08 SS G_CDS: -1.00 Total: -15.07 kcal Atomic # 7 Polarization: -23.37 SS G_CDS: 0.63 Total: -22.74 kcal Atomic # 8 Polarization: -13.18 SS G_CDS: -0.68 Total: -13.85 kcal Atomic # 14 Polarization: 20.19 SS G_CDS: -5.02 Total: 15.16 kcal Atomic # 17 Polarization: -5.14 SS G_CDS: -1.33 Total: -6.47 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.14 -6.98 -35.13 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001225262255.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.263 kcal (2) G-P(sol) polarization free energy of solvation -28.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds