Wall clock time and date at job start Mon Mar 30 2020 02:08:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42902 * 114.00101 * 2 1 4 4 C 1.53001 * 109.46989 * 180.02562 * 3 2 1 5 5 H 1.09003 * 109.46709 * 185.00032 * 4 3 2 6 6 C 1.53000 * 109.46965 * 304.99319 * 4 3 2 7 7 Cl 1.80306 * 109.47082 * 185.00339 * 6 4 3 8 8 O 1.42891 * 109.47428 * 64.99969 * 4 3 2 9 9 C 1.35681 * 117.00195 * 140.78921 * 8 4 3 10 10 C 1.39314 * 119.81362 * 5.96399 * 9 8 4 11 11 C 1.36440 * 120.18227 * 179.76178 * 10 9 8 12 12 C 1.40839 * 119.81142 * 0.51459 * 11 10 9 13 13 C 1.41207 * 120.17990 * 179.72013 * 12 11 10 14 14 H 1.08001 * 120.00392 * 25.28891 * 13 12 11 15 15 C 1.39892 * 120.00009 * 205.29091 * 13 12 11 16 16 N 1.30879 * 119.99899 * 16.09316 * 15 13 12 17 17 Si 1.86799 * 119.99937 * 196.09109 * 15 13 12 18 18 H 1.48500 * 109.47029 * 90.00241 * 17 15 13 19 19 H 1.48502 * 109.47196 * 209.99805 * 17 15 13 20 20 H 1.48499 * 109.47623 * 330.00107 * 17 15 13 21 21 C 1.40834 * 119.63940 * 359.74312 * 12 11 10 22 22 C 1.36436 * 119.81433 * 359.97438 * 21 12 11 23 23 H 1.09003 * 109.46800 * 180.02562 * 1 2 3 24 24 H 1.09004 * 109.46527 * 299.99557 * 1 2 3 25 25 H 1.08995 * 109.47361 * 59.99965 * 1 2 3 26 26 H 1.09006 * 109.46873 * 300.00252 * 3 2 1 27 27 H 1.09000 * 109.47236 * 60.00194 * 3 2 1 28 28 H 1.08996 * 109.47667 * 305.00983 * 6 4 3 29 29 H 1.09000 * 109.46723 * 65.00454 * 6 4 3 30 30 H 1.07994 * 119.90920 * 0.02562 * 10 9 8 31 31 H 1.07996 * 120.09527 * 180.24841 * 11 10 9 32 32 H 0.97005 * 120.00081 * 179.97438 * 16 15 13 33 33 H 1.07999 * 120.09166 * 179.97438 * 21 12 11 34 34 H 1.08000 * 119.90889 * 179.97438 * 22 21 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.9785 2.1765 0.0889 6 6 3.9790 0.3194 1.1808 7 17 5.7798 0.2973 1.2668 8 8 3.9649 0.5796 -1.2219 9 6 5.0955 1.0711 -1.7886 10 6 5.8462 2.0324 -1.1155 11 6 6.9869 2.5283 -1.6762 12 6 7.3990 2.0734 -2.9438 13 6 8.5751 2.5856 -3.5340 14 1 9.3616 2.9858 -2.9114 15 6 8.7216 2.5747 -4.9252 16 7 7.6765 2.3932 -5.6918 17 14 10.4088 2.8192 -5.6886 18 1 11.0715 1.5010 -5.8574 19 1 10.2624 3.4729 -7.0140 20 1 11.2339 3.6780 -4.8016 21 6 6.6314 1.1053 -3.6198 22 6 5.4963 0.6155 -3.0426 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3632 0.5138 0.8901 25 1 -0.3634 0.5138 -0.8899 26 1 1.6885 1.8464 -0.8900 27 1 1.6887 1.8464 0.8900 28 1 3.5760 0.7327 2.1053 29 1 3.6091 -0.6970 1.0457 30 1 5.5266 2.3831 -0.1453 31 1 7.5700 3.2705 -1.1514 32 1 7.7779 2.3859 -6.6565 33 1 6.9403 0.7517 -4.5924 34 1 4.9062 -0.1266 -3.5598 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001225266374.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:08:14 Heat of formation + Delta-G solvation = -71.536397 kcal Electronic energy + Delta-G solvation = -18342.795533 eV Core-core repulsion = 15267.002638 eV Total energy + Delta-G solvation = -3075.792896 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.26687 -37.76779 -36.37710 -35.48453 -33.33925 -31.79762 -29.50697 -28.89569 -27.22222 -25.66986 -24.78924 -22.33774 -20.71508 -19.93684 -17.60408 -17.20333 -16.32294 -15.81364 -15.65569 -15.10906 -14.56885 -14.30450 -13.90585 -13.58492 -13.32151 -12.83544 -12.44706 -12.15194 -12.04434 -11.86841 -11.79718 -11.30638 -11.17801 -10.95927 -10.76036 -10.72058 -10.40940 -10.11607 -9.80352 -9.75275 -9.50762 -9.19972 -8.95128 -7.51991 -6.90977 -6.64491 -4.19002 2.54120 2.84078 3.06376 3.12432 3.15829 3.26842 3.67957 3.95615 4.01229 4.65021 4.76683 4.94523 5.11279 5.19070 5.23900 5.29091 5.48691 5.54853 5.57379 5.76193 5.83692 6.20538 6.30596 6.79487 7.02258 7.06960 7.19587 7.27775 7.54431 7.64400 7.88452 8.08731 8.29098 8.51396 8.72742 8.97791 9.06711 10.29668 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.030874 B = 0.004623 C = 0.004188 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 906.691069 B = 6055.084298 C = 6684.492835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.380 6.380 3 C 0.063 3.937 4 C 0.079 3.921 5 H 0.098 0.902 6 C -0.050 4.050 7 Cl -0.168 7.168 8 O -0.305 6.305 9 C -0.007 4.007 10 C -0.155 4.155 11 C -0.196 4.196 12 C 0.089 3.911 13 C -0.464 4.464 14 H 0.075 0.925 15 C 0.074 3.926 16 N -0.803 5.803 17 Si 0.907 3.093 18 H -0.269 1.269 19 H -0.279 1.279 20 H -0.264 1.264 21 C -0.135 4.135 22 C -0.119 4.119 23 H 0.085 0.915 24 H 0.038 0.962 25 H 0.041 0.959 26 H 0.065 0.935 27 H 0.062 0.938 28 H 0.093 0.907 29 H 0.104 0.896 30 H 0.098 0.902 31 H 0.092 0.908 32 H 0.278 0.722 33 H 0.125 0.875 34 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.328 -1.809 9.694 14.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.299 6.299 3 C -0.014 4.014 4 C 0.021 3.979 5 H 0.115 0.885 6 C -0.113 4.113 7 Cl -0.141 7.141 8 O -0.220 6.220 9 C -0.050 4.050 10 C -0.173 4.173 11 C -0.216 4.216 12 C 0.087 3.913 13 C -0.494 4.494 14 H 0.093 0.907 15 C -0.142 4.142 16 N -0.429 5.429 17 Si 0.732 3.268 18 H -0.194 1.194 19 H -0.205 1.205 20 H -0.188 1.188 21 C -0.154 4.154 22 C -0.137 4.137 23 H 0.103 0.897 24 H 0.056 0.944 25 H 0.060 0.940 26 H 0.083 0.917 27 H 0.080 0.920 28 H 0.111 0.889 29 H 0.122 0.878 30 H 0.116 0.884 31 H 0.110 0.890 32 H 0.089 0.911 33 H 0.143 0.857 34 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -10.256 -2.129 9.371 14.055 hybrid contribution 0.610 0.576 -0.238 0.872 sum -9.646 -1.552 9.134 13.374 Atomic orbital electron populations 1.22738 0.81373 1.02706 0.99789 1.87973 1.19321 1.27228 1.95344 1.22759 0.91955 0.85520 1.01135 1.22493 0.92272 0.97917 0.85215 0.88481 1.24786 0.81808 1.04861 0.99870 1.98750 1.17274 1.99187 1.98884 1.86025 1.41632 1.58436 1.35929 1.18585 0.89421 1.01996 0.95023 1.20404 0.97926 1.00252 0.98751 1.20545 0.98118 1.03967 0.98927 1.17582 0.92688 0.90185 0.90895 1.19465 1.02360 1.36248 0.91365 0.90699 1.25847 0.97907 0.92839 0.97560 1.69829 1.30102 1.37116 1.05896 0.86340 0.82683 0.79295 0.78509 1.19403 1.20451 1.18785 1.20962 0.95458 0.98063 1.00955 1.19808 0.98784 1.02204 0.92944 0.89684 0.94368 0.93989 0.91693 0.91955 0.88871 0.87751 0.88427 0.88971 0.91080 0.85718 0.88688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.28 11.01 101.05 1.11 1.40 16 2 O -0.38 -5.02 9.89 -40.08 -0.40 -5.42 16 3 C 0.06 0.78 5.81 37.16 0.22 1.00 16 4 C 0.08 1.22 2.55 -26.73 -0.07 1.15 16 5 H 0.10 1.49 5.43 -51.93 -0.28 1.21 16 6 C -0.05 -0.69 6.05 37.16 0.22 -0.46 16 7 Cl -0.17 -2.81 25.78 -51.86 -1.34 -4.15 16 8 O -0.30 -6.16 9.65 -23.60 -0.23 -6.39 16 9 C -0.01 -0.17 6.26 -38.78 -0.24 -0.41 16 10 C -0.15 -3.47 7.18 -39.83 -0.29 -3.76 16 11 C -0.20 -4.87 9.74 -39.25 -0.38 -5.25 16 12 C 0.09 2.40 5.57 -106.80 -0.60 1.81 16 13 C -0.46 -12.56 9.05 -37.84 -0.34 -12.90 16 14 H 0.07 1.96 7.89 -52.49 -0.41 1.54 16 15 C 0.07 1.91 5.17 -17.34 -0.09 1.82 16 16 N -0.80 -21.12 10.90 55.54 0.61 -20.51 16 17 Si 0.91 19.11 29.59 -169.99 -5.03 14.08 16 18 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 19 H -0.28 -5.75 7.11 56.52 0.40 -5.35 16 20 H -0.26 -5.50 7.11 56.52 0.40 -5.10 16 21 C -0.13 -3.59 8.63 -39.25 -0.34 -3.92 16 22 C -0.12 -2.92 9.92 -39.83 -0.40 -3.31 16 23 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.04 0.28 8.14 -51.93 -0.42 -0.14 16 25 H 0.04 0.37 8.14 -51.93 -0.42 -0.05 16 26 H 0.06 0.82 8.14 -51.93 -0.42 0.39 16 27 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 28 H 0.09 0.98 8.14 -51.93 -0.42 0.55 16 29 H 0.10 1.47 7.73 -51.93 -0.40 1.07 16 30 H 0.10 1.93 4.83 -52.49 -0.25 1.67 16 31 H 0.09 2.17 8.06 -52.49 -0.42 1.75 16 32 H 0.28 6.68 8.30 -40.82 -0.34 6.34 16 33 H 0.13 3.41 6.14 -52.49 -0.32 3.08 16 34 H 0.09 2.18 8.06 -52.49 -0.42 1.76 16 LS Contribution 299.36 15.07 4.51 4.51 Total: -1.00 -29.53 299.36 -7.25 -36.78 By element: Atomic # 1 Polarization: 8.13 SS G_CDS: -4.19 Total: 3.94 kcal Atomic # 6 Polarization: -21.66 SS G_CDS: -1.19 Total: -22.85 kcal Atomic # 7 Polarization: -21.12 SS G_CDS: 0.61 Total: -20.51 kcal Atomic # 8 Polarization: -11.18 SS G_CDS: -0.62 Total: -11.81 kcal Atomic # 14 Polarization: 19.11 SS G_CDS: -5.03 Total: 14.08 kcal Atomic # 17 Polarization: -2.81 SS G_CDS: -1.34 Total: -4.15 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -29.53 -7.25 -36.78 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001225266374.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.756 kcal (2) G-P(sol) polarization free energy of solvation -29.529 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds